RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 TMEM191AQ9H0A3 160 aa4.65□□□□□ -1.67
TOP3A-207ENST00000493648 NAT8BQ9UHF3 227 aa4.65□□□□□ -1.67
TOP3A-207ENST00000493648 IGLV5-52A0A0A0MRZ9 124 aa4.64□□□□□ -1.67
TOP3A-207ENST00000493648 UBE2L6O14933 153 aa4.64□□□□□ -1.67
TOP3A-207ENST00000493648 GCSHP23434 173 aa4.64□□□□□ -1.67
TOP3A-207ENST00000493648 AMTP48728 403 aa4.64□□□□□ -1.67
TOP3A-207ENST00000493648 RBX1P62877 108 aa4.64□□□□□ -1.67
TOP3A-207ENST00000493648 ENHOQ6UWT2 76 aa4.64□□□□□ -1.67
TOP3A-207ENST00000493648 NUP35Q8NFH5 326 aa4.64□□□□□ -1.67
TOP3A-207ENST00000493648 BAALCQ8WXS3 180 aa4.64□□□□□ -1.67
TOP3A-207ENST00000493648 TRBV6-5A0A0K0K1A5 114 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 A0A1B0GUV1 79 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 A0A1B0GW15 77 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 SMIM27A0A1W2PRY6 76 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 SDHAF1A6NFY7 115 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 PPP1R2P9O14990 202 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 NCR2O95944 276 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 PPP1R17O96001 155 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 RAB4AP20338 218 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 PMCHP20382 165 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 FUSP35637 526 aaKnown RBP eCLIP4.63□□□□□ -1.67
TOP3A-207ENST00000493648 MIAQ16674 131 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 SLC7A5P1Q8MH63 180 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 LINC00269Q8N2A0 174 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 Q8N976 141 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 DEFB104AQ8WTQ1 72 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 RPL39LQ96EH5 51 aaKnown RBP4.63□□□□□ -1.67
TOP3A-207ENST00000493648 MRAP2Q96G30 205 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 C1orf43Q9BWL3 253 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 ST20Q9HBF5 79 aa4.63□□□□□ -1.67
TOP3A-207ENST00000493648 H7C423 109 aa4.62□□□□□ -1.67
TOP3A-207ENST00000493648 I3L3M4 83 aa4.62□□□□□ -1.67
TOP3A-207ENST00000493648 S100A8P05109 93 aa4.62□□□□□ -1.67
TOP3A-207ENST00000493648 CAMPP49913 170 aa4.62□□□□□ -1.67
TOP3A-207ENST00000493648 REG3AQ06141 175 aa4.62□□□□□ -1.67
TOP3A-207ENST00000493648 PNRC1Q12796 327 aaPredicted RBP4.62□□□□□ -1.67
TOP3A-207ENST00000493648 C14orf177Q52M58 125 aa4.62□□□□□ -1.67
TOP3A-207ENST00000493648 UQCC3Q6UW78 93 aa4.62□□□□□ -1.67
TOP3A-207ENST00000493648 COMMD7Q86VX2 200 aa4.62□□□□□ -1.67
TOP3A-207ENST00000493648 AMN1Q8IY45 258 aa4.62□□□□□ -1.67
TOP3A-207ENST00000493648 MAPKAPK5-AS1Q8N8E1 139 aa4.62□□□□□ -1.67
TOP3A-207ENST00000493648 RNF185Q96GF1 192 aa4.62□□□□□ -1.67
TOP3A-207ENST00000493648 PRR34Q9NV39 138 aa4.62□□□□□ -1.67
TOP3A-207ENST00000493648 TRAV8-4A0A0B4J246 113 aa4.61□□□□□ -1.67
TOP3A-207ENST00000493648 F8W036 122 aa4.61□□□□□ -1.67
TOP3A-207ENST00000493648 VCYO14598 125 aa4.61□□□□□ -1.67
TOP3A-207ENST00000493648 LECT2O14960 151 aa4.61□□□□□ -1.67
TOP3A-207ENST00000493648 APCSP02743 223 aa4.61□□□□□ -1.67
TOP3A-207ENST00000493648 MT-ND4LP03901 98 aa4.61□□□□□ -1.67
TOP3A-207ENST00000493648 NDUFA5Q16718 116 aa4.61□□□□□ -1.67
TOP3A-207ENST00000493648 AMMECR1LQ6DCA0 310 aa4.61□□□□□ -1.67
TOP3A-207ENST00000493648 C20orf203Q8NBC4 194 aa4.61□□□□□ -1.67
TOP3A-207ENST00000493648 ANAPC16Q96DE5 110 aa4.61□□□□□ -1.67
TOP3A-207ENST00000493648 PKHD1P08F94 4074 aa4.61□□□□□ -1.67
TOP3A-207ENST00000493648 DYNC1H1Q14204 4646 aaKnown RBP4.61□□□□□ -1.67
TOP3A-207ENST00000493648 KIAA1109Q2LD37 5005 aa4.61□□□□□ -1.67
TOP3A-207ENST00000493648 DNAH11Q96DT5 4516 aa4.6□□□□□ -1.67
TOP3A-207ENST00000493648 IGLV4-60A0A075B6I1 120 aa4.6□□□□□ -1.67
TOP3A-207ENST00000493648 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.6□□□□□ -1.67
TOP3A-207ENST00000493648 TMEM218A2RU14 115 aa4.6□□□□□ -1.67
TOP3A-207ENST00000493648 GAS8-AS1O95177 125 aa4.6□□□□□ -1.67
TOP3A-207ENST00000493648 CKS2P33552 79 aa4.6□□□□□ -1.67
TOP3A-207ENST00000493648 POLR2KP53803 58 aaKnown RBP4.6□□□□□ -1.67
TOP3A-207ENST00000493648 KRTAP10-1P60331 282 aa4.6□□□□□ -1.67
TOP3A-207ENST00000493648 HBBP68871 147 aa4.6□□□□□ -1.67
TOP3A-207ENST00000493648 WFDC2Q14508 124 aa4.6□□□□□ -1.67
TOP3A-207ENST00000493648 FAM104BQ5XKR9 115 aa4.6□□□□□ -1.67
TOP3A-207ENST00000493648 RNASEKQ6P5S7 137 aaKnown RBP4.6□□□□□ -1.67
TOP3A-207ENST00000493648 CLPSL2Q6UWE3 100 aa4.6□□□□□ -1.67
TOP3A-207ENST00000493648 BTF3L4Q96K17 158 aa4.6□□□□□ -1.67
TOP3A-207ENST00000493648 TMEM70Q9BUB7 260 aa4.6□□□□□ -1.67
TOP3A-207ENST00000493648 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.59□□□□□ -1.67
TOP3A-207ENST00000493648 TRBV27A0A0K0K1C4 114 aa4.59□□□□□ -1.67
TOP3A-207ENST00000493648 IGKV2-29A2NJV5 120 aaPredicted RBP4.59□□□□□ -1.67
TOP3A-207ENST00000493648 SMKR1H3BMG3 65 aa4.59□□□□□ -1.67
TOP3A-207ENST00000493648 HLA-DQA1P01909 254 aa4.59□□□□□ -1.67
TOP3A-207ENST00000493648 FGF6P10767 208 aa4.59□□□□□ -1.67
TOP3A-207ENST00000493648 ZNF25P17030 456 aaPredicted RBP4.59□□□□□ -1.67
TOP3A-207ENST00000493648 FCER1GP30273 86 aa4.59□□□□□ -1.67
TOP3A-207ENST00000493648 RPS10P46783 165 aaKnown RBP4.59□□□□□ -1.67
TOP3A-207ENST00000493648 SUMO2P61956 95 aaKnown RBP4.59□□□□□ -1.67
TOP3A-207ENST00000493648 MRPL51Q4U2R6 128 aaKnown RBP4.59□□□□□ -1.67
TOP3A-207ENST00000493648 MRPL54Q6P161 138 aaKnown RBP4.59□□□□□ -1.67
TOP3A-207ENST00000493648 Q8N1X5 172 aa4.59□□□□□ -1.67
TOP3A-207ENST00000493648 TMEM101Q96IK0 257 aa4.59□□□□□ -1.67
TOP3A-207ENST00000493648 KIR2DL4Q99706 377 aa4.59□□□□□ -1.67
TOP3A-207ENST00000493648 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
TOP3A-207ENST00000493648 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
TOP3A-207ENST00000493648 TMEM242Q9NWH2 141 aa4.59□□□□□ -1.67
TOP3A-207ENST00000493648 IGLV10-54A0A075B6I4 117 aa4.58□□□□□ -1.68
TOP3A-207ENST00000493648 IGKV3OR2-268A0A0C4DH90 116 aa4.58□□□□□ -1.68
TOP3A-207ENST00000493648 A0A1B0GXF2 115 aa4.58□□□□□ -1.68
TOP3A-207ENST00000493648 USP17L23D6RBM5 183 aa4.58□□□□□ -1.68
TOP3A-207ENST00000493648 TSHBP01222 138 aa4.58□□□□□ -1.68
TOP3A-207ENST00000493648 PPBPP02775 128 aa4.58□□□□□ -1.68
TOP3A-207ENST00000493648 ESDP10768 282 aa4.58□□□□□ -1.68
TOP3A-207ENST00000493648 XGP55808 180 aa4.58□□□□□ -1.68
TOP3A-207ENST00000493648 SMAGPQ0VAQ4 97 aa4.58□□□□□ -1.68
TOP3A-207ENST00000493648 C10orf91Q5T1B1 145 aa4.58□□□□□ -1.68
TOP3A-207ENST00000493648 DGAT2L7PQ6IED9 249 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms