RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 RPL28P46779 137 aaKnown RBP7.09□□□□□ -1.27
VPS8-225ENST00000492449 FP248Q71RG6 208 aaPredicted RBP7.09□□□□□ -1.27
VPS8-225ENST00000492449 Q8N6K4 173 aa7.09□□□□□ -1.27
VPS8-225ENST00000492449 DPM3Q9P2X0 92 aa7.09□□□□□ -1.27
VPS8-225ENST00000492449 IGLV5-45A0A087WSX0 123 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 A0A087WWL8 130 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 GHRHP01286 108 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 CD28P10747 220 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 GPR179Q6PRD1 2367 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 TRBV10-3A0A0K0K1G6 114 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 C15orf32Q32M92 178 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 C1orf195Q5TG92 126 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 LYPD5Q6UWN5 251 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 TMEM105Q8N8V8 129 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 KLLNB2CW77 178 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 S100A7L2Q5SY68 101 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 CCDC140Q96MF4 163 aa7.08□□□□□ -1.28
VPS8-225ENST00000492449 KNCNA6PVL3 124 aa7.07□□□□□ -1.28
VPS8-225ENST00000492449 TRBV12-3P01733 135 aa7.07□□□□□ -1.28
VPS8-225ENST00000492449 PRB3Q04118 309 aaPredicted RBP7.07□□□□□ -1.28
VPS8-225ENST00000492449 HIST2H2BCQ6DN03 193 aa7.07□□□□□ -1.28
VPS8-225ENST00000492449 HIST2H2BDQ6DRA6 164 aa7.07□□□□□ -1.28
VPS8-225ENST00000492449 URB1O60287 2271 aaKnown RBP7.07□□□□□ -1.28
VPS8-225ENST00000492449 DMXL1Q9Y485 3027 aa7.06□□□□□ -1.28
VPS8-225ENST00000492449 IGHV7-81A0A0B4J1V7 117 aa7.06□□□□□ -1.28
VPS8-225ENST00000492449 A8MZ25 164 aa7.06□□□□□ -1.28
VPS8-225ENST00000492449 KLKP1Q107X0 134 aa7.06□□□□□ -1.28
VPS8-225ENST00000492449 SOSTDC1Q6X4U4 206 aa7.06□□□□□ -1.28
VPS8-225ENST00000492449 C14orf132Q9NPU4 83 aa7.06□□□□□ -1.28
VPS8-225ENST00000492449 CELSR3Q9NYQ7 3312 aa7.06□□□□□ -1.28
VPS8-225ENST00000492449 ODF3BA8MYP8 253 aa7.06□□□□□ -1.28
VPS8-225ENST00000492449 ARRDC1-AS1Q9H2J1 176 aa7.06□□□□□ -1.28
VPS8-225ENST00000492449 PLCE1Q9P212 2302 aa7.06□□□□□ -1.28
VPS8-225ENST00000492449 EDN2P20800 178 aa7.05□□□□□ -1.28
VPS8-225ENST00000492449 C22orf34Q6ZV56 151 aa7.05□□□□□ -1.28
VPS8-225ENST00000492449 RNASE6Q93091 150 aaKnown RBP7.05□□□□□ -1.28
VPS8-225ENST00000492449 IGHV3OR16-13A0A075B7E8 117 aa7.05□□□□□ -1.28
VPS8-225ENST00000492449 IGHV3-74A0A0B4J1X5 117 aa7.05□□□□□ -1.28
VPS8-225ENST00000492449 IGLV5-39A0A0G2JS06 123 aa7.05□□□□□ -1.28
VPS8-225ENST00000492449 C9orf129Q5T035 196 aaKnown RBP7.05□□□□□ -1.28
VPS8-225ENST00000492449 FAM27E3Q08E93 113 aa7.05□□□□□ -1.28
VPS8-225ENST00000492449 C20orf197Q8N268 126 aa7.05□□□□□ -1.28
VPS8-225ENST00000492449 Q9HAA7 133 aa7.05□□□□□ -1.28
VPS8-225ENST00000492449 CACNA1HO95180 2353 aa7.04□□□□□ -1.28
VPS8-225ENST00000492449 DCHS1Q96JQ0 3298 aa7.04□□□□□ -1.28
VPS8-225ENST00000492449 TRAV7A0A075B6U4 112 aa7.04□□□□□ -1.28
VPS8-225ENST00000492449 TRAV13-2A0A0B4J235 113 aa7.04□□□□□ -1.28
VPS8-225ENST00000492449 A0A1W2PNU3 283 aaPredicted RBP7.04□□□□□ -1.28
VPS8-225ENST00000492449 CCKP06307 115 aa7.04□□□□□ -1.28
VPS8-225ENST00000492449 ATP5EP56381 51 aaPredicted RBP7.03□□□□□ -1.28
VPS8-225ENST00000492449 IGFL2Q6UWQ7 119 aa7.03□□□□□ -1.28
VPS8-225ENST00000492449 CLEC19AQ6UXS0 136 aa7.03□□□□□ -1.28
VPS8-225ENST00000492449 ASPMQ8IZT6 3477 aa7.03□□□□□ -1.28
VPS8-225ENST00000492449 IGHV3-49A0A0A0MS15 119 aa7.03□□□□□ -1.28
VPS8-225ENST00000492449 IGHV3-16A0A0C4DH30 117 aa7.03□□□□□ -1.28
VPS8-225ENST00000492449 ICE1Q9Y2F5 2266 aa7.03□□□□□ -1.28
VPS8-225ENST00000492449 KALRNO60229 2985 aa7.03□□□□□ -1.28
VPS8-225ENST00000492449 DSPP15924 2871 aaKnown RBP7.02□□□□□ -1.28
VPS8-225ENST00000492449 HILS1P60008 231 aa7.02□□□□□ -1.28
VPS8-225ENST00000492449 FAM74A4Q5TZK3 123 aa7.02□□□□□ -1.28
VPS8-225ENST00000492449 EP300Q09472 2414 aaPredicted RBP7.02□□□□□ -1.29
VPS8-225ENST00000492449 H0YGX0 51 aa7.02□□□□□ -1.29
VPS8-225ENST00000492449 ZNF625Q96I27 306 aaPredicted RBP7.02□□□□□ -1.29
VPS8-225ENST00000492449 ZFHX2Q9C0A1 2572 aaPredicted RBP7.02□□□□□ -1.29
VPS8-225ENST00000492449 FAM19A3Q7Z5A8 133 aa7.02□□□□□ -1.29
VPS8-225ENST00000492449 WFDC11Q8NEX6 87 aa7.02□□□□□ -1.29
VPS8-225ENST00000492449 Q9H8V8 135 aa7.02□□□□□ -1.29
VPS8-225ENST00000492449 Q8N9W7 124 aa7.01□□□□□ -1.29
VPS8-225ENST00000492449 MUC6Q6W4X9 2439 aa7.01□□□□□ -1.29
VPS8-225ENST00000492449 TRAV23DV6A0A075B6W5 121 aa7.01□□□□□ -1.29
VPS8-225ENST00000492449 CFHR3Q02985 330 aa7.01□□□□□ -1.29
VPS8-225ENST00000492449 CDKN2A-AS1Q9UH64 79 aa7.01□□□□□ -1.29
VPS8-225ENST00000492449 FAM215AQ9Y5M1 114 aa7.01□□□□□ -1.29
VPS8-225ENST00000492449 A0A087WYN8 130 aa7□□□□□ -1.29
VPS8-225ENST00000492449 MINOS1Q5TGZ0 78 aa7□□□□□ -1.29
VPS8-225ENST00000492449 CHCHD7Q9BUK0 85 aa7□□□□□ -1.29
VPS8-225ENST00000492449 RIF1Q5UIP0 2472 aaKnown RBP7□□□□□ -1.29
VPS8-225ENST00000492449 NDUFC1O43677 76 aa7□□□□□ -1.29
VPS8-225ENST00000492449 CDSNQ15517 529 aa7□□□□□ -1.29
VPS8-225ENST00000492449 ATP1A1-AS1Q5TC04 95 aa6.99□□□□□ -1.29
VPS8-225ENST00000492449 DEFB1P60022 68 aa6.99□□□□□ -1.29
VPS8-225ENST00000492449 TRBV7-6A0A0J9YX20 115 aa6.99□□□□□ -1.29
VPS8-225ENST00000492449 F6UB75 175 aa6.99□□□□□ -1.29
VPS8-225ENST00000492449 BSPH1Q075Z2 132 aa6.99□□□□□ -1.29
VPS8-225ENST00000492449 SS18Q15532 418 aa6.99□□□□□ -1.29
VPS8-225ENST00000492449 BRK1Q8WUW1 75 aa6.99□□□□□ -1.29
VPS8-225ENST00000492449 PTPRZ1P23471 2315 aaPredicted RBP6.98□□□□□ -1.29
VPS8-225ENST00000492449 CRPP02741 224 aa6.98□□□□□ -1.29
VPS8-225ENST00000492449 RNASE13Q5GAN3 156 aaKnown RBP6.98□□□□□ -1.29
VPS8-225ENST00000492449 ATP6V0E1O15342 81 aa6.98□□□□□ -1.29
VPS8-225ENST00000492449 HOXD3P31249 432 aaPredicted RBP6.98□□□□□ -1.29
VPS8-225ENST00000492449 FAM19A1Q7Z5A9 133 aa6.98□□□□□ -1.29
VPS8-225ENST00000492449 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.98□□□□□ -1.29
VPS8-225ENST00000492449 NCR3O14931 201 aa6.97□□□□□ -1.29
VPS8-225ENST00000492449 ECSCRQ19T08 205 aa6.97□□□□□ -1.29
VPS8-225ENST00000492449 LINC00167Q96N53 147 aa6.97□□□□□ -1.29
VPS8-225ENST00000492449 MINOS1-NBL1R4GNA1 71 aa6.97□□□□□ -1.29
VPS8-225ENST00000492449 PRRC2CQ9Y520 2896 aaKnown RBP6.97□□□□□ -1.29
VPS8-225ENST00000492449 NDUFA4O00483 81 aa6.97□□□□□ -1.29
VPS8-225ENST00000492449 JMJD7-PLA2G4BH0Y9G9 81 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms