RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 MUSTN1Q8IVN3 82 aa11.74□□□□□ -0.53
SEMA4D-220ENST00000492386 TMEM263Q8WUH6 116 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-220ENST00000492386 SPXQ9BT56 116 aa11.74□□□□□ -0.53
SEMA4D-220ENST00000492386 PRRC2AP48634 2157 aaKnown RBP11.73□□□□□ -0.53
SEMA4D-220ENST00000492386 ZNF415Q09FC8 603 aa11.73□□□□□ -0.53
SEMA4D-220ENST00000492386 PTH2Q96A98 100 aa11.73□□□□□ -0.53
SEMA4D-220ENST00000492386 CHCHD7Q9BUK0 85 aa11.73□□□□□ -0.53
SEMA4D-220ENST00000492386 MAP6D1Q9H9H5 199 aa11.73□□□□□ -0.53
SEMA4D-220ENST00000492386 A0A0J9YXY3 114 aa11.72□□□□□ -0.53
SEMA4D-220ENST00000492386 SCGB1A1P11684 91 aa11.72□□□□□ -0.53
SEMA4D-220ENST00000492386 SBSPONQ8IVN8 264 aa11.72□□□□□ -0.53
SEMA4D-220ENST00000492386 C11orf72Q8NBR9 251 aa11.72□□□□□ -0.53
SEMA4D-220ENST00000492386 TIMM21Q9BVV7 248 aa11.72□□□□□ -0.53
SEMA4D-220ENST00000492386 PEMTQ9UBM1 199 aa11.72□□□□□ -0.53
SEMA4D-220ENST00000492386 TEX15Q9BXT5 2789 aa11.72□□□□□ -0.53
SEMA4D-220ENST00000492386 IGHV3-33P01772 117 aa11.72□□□□□ -0.53
SEMA4D-220ENST00000492386 RNASE13Q5GAN3 156 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-220ENST00000492386 C4orf3Q8WVX3 66 aa11.72□□□□□ -0.53
SEMA4D-220ENST00000492386 LRRK2Q5S007 2527 aa11.72□□□□□ -0.53
SEMA4D-220ENST00000492386 A0A0B4J2C4 111 aa11.71□□□□□ -0.53
SEMA4D-220ENST00000492386 KRTAP10-9P60411 292 aa11.71□□□□□ -0.53
SEMA4D-220ENST00000492386 RAX2Q96IS3 184 aa11.71□□□□□ -0.53
SEMA4D-220ENST00000492386 TRAV8-3A0A0A6YYJ7 113 aa11.71□□□□□ -0.54
SEMA4D-220ENST00000492386 PRB1P04280 392 aa11.71□□□□□ -0.54
SEMA4D-220ENST00000492386 LITAFQ99732 161 aa11.71□□□□□ -0.54
SEMA4D-220ENST00000492386 PTPN13Q12923 2485 aa11.71□□□□□ -0.54
SEMA4D-220ENST00000492386 ADARB2-AS1A8MUL3 147 aa11.7□□□□□ -0.54
SEMA4D-220ENST00000492386 LINC00467Q9BRT7 94 aa11.7□□□□□ -0.54
SEMA4D-220ENST00000492386 UBE2D4Q9Y2X8 147 aa11.7□□□□□ -0.54
SEMA4D-220ENST00000492386 SCGB1C2P0DMR2 95 aa11.7□□□□□ -0.54
SEMA4D-220ENST00000492386 TEN1Q86WV5 123 aa11.7□□□□□ -0.54
SEMA4D-220ENST00000492386 CARD19Q96LW7 228 aa11.7□□□□□ -0.54
SEMA4D-220ENST00000492386 MYO9AB2RTY4 2548 aa11.7□□□□□ -0.54
SEMA4D-220ENST00000492386 ZNF462Q96JM2 2506 aa11.7□□□□□ -0.54
SEMA4D-220ENST00000492386 LINC01587Q99440 93 aa11.69□□□□□ -0.54
SEMA4D-220ENST00000492386 SPANXA1Q9NS26 97 aa11.69□□□□□ -0.54
SEMA4D-220ENST00000492386 IGHV1-58A0A0C4DH39 117 aa11.69□□□□□ -0.54
SEMA4D-220ENST00000492386 IGHV3-53P01767 116 aa11.69□□□□□ -0.54
SEMA4D-220ENST00000492386 DEFB114Q30KQ6 69 aa11.69□□□□□ -0.54
SEMA4D-220ENST00000492386 BEAN1Q3B7T3 259 aa11.69□□□□□ -0.54
SEMA4D-220ENST00000492386 HIST2H2BDQ6DRA6 164 aa11.69□□□□□ -0.54
SEMA4D-220ENST00000492386 ZFYVE26Q68DK2 2539 aa11.69□□□□□ -0.54
SEMA4D-220ENST00000492386 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-220ENST00000492386 TINCRA0A1B0GVN0 87 aa11.68□□□□□ -0.54
SEMA4D-220ENST00000492386 IGKV2-29A2NJV5 120 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-220ENST00000492386 UBR5O95071 2799 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-220ENST00000492386 DYNLRB2Q8TF09 96 aa11.68□□□□□ -0.54
SEMA4D-220ENST00000492386 PPDPFLQ8WWR9 84 aa11.68□□□□□ -0.54
SEMA4D-220ENST00000492386 ERG28Q9UKR5 140 aa11.68□□□□□ -0.54
SEMA4D-220ENST00000492386 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-220ENST00000492386 KHDC1LQ5JSQ8 128 aa11.68□□□□□ -0.54
SEMA4D-220ENST00000492386 CDIP1Q9H305 208 aa11.68□□□□□ -0.54
SEMA4D-220ENST00000492386 ABCA12Q86UK0 2595 aa11.67□□□□□ -0.54
SEMA4D-220ENST00000492386 FHL3Q13643 280 aa11.67□□□□□ -0.54
SEMA4D-220ENST00000492386 H7C2G1 150 aa11.67□□□□□ -0.54
SEMA4D-220ENST00000492386 INSP01308 110 aa11.67□□□□□ -0.54
SEMA4D-220ENST00000492386 Q6ZUT4 128 aa11.67□□□□□ -0.54
SEMA4D-220ENST00000492386 VSIG2Q96IQ7 327 aa11.67□□□□□ -0.54
SEMA4D-220ENST00000492386 DNAJC30Q96LL9 226 aa11.67□□□□□ -0.54
SEMA4D-220ENST00000492386 NAV2Q8IVL1 2488 aa11.67□□□□□ -0.54
SEMA4D-220ENST00000492386 IGHV3-38A0A0C4DH36 116 aa11.66□□□□□ -0.54
SEMA4D-220ENST00000492386 RS1O15537 224 aa11.66□□□□□ -0.54
SEMA4D-220ENST00000492386 ADAMTSL4-AS1Q5T5F5 129 aa11.66□□□□□ -0.54
SEMA4D-220ENST00000492386 NDUFA12Q9UI09 145 aa11.66□□□□□ -0.54
SEMA4D-220ENST00000492386 USP24Q9UPU5 2620 aa11.66□□□□□ -0.54
SEMA4D-220ENST00000492386 DEFB113Q30KQ7 82 aa11.65□□□□□ -0.54
SEMA4D-220ENST00000492386 A8MZ25 164 aa11.65□□□□□ -0.54
SEMA4D-220ENST00000492386 SPINK8P0C7L1 97 aa11.65□□□□□ -0.54
SEMA4D-220ENST00000492386 ANKRD29Q8N6D5 301 aa11.65□□□□□ -0.54
SEMA4D-220ENST00000492386 BBC3Q96PG8 261 aaPredicted RBP11.64□□□□□ -0.55
SEMA4D-220ENST00000492386 SPANXDQ9BXN6 97 aa11.64□□□□□ -0.55
SEMA4D-220ENST00000492386 SPANXCQ9NY87 97 aa11.64□□□□□ -0.55
SEMA4D-220ENST00000492386 Q96MF0 132 aa11.63□□□□□ -0.55
SEMA4D-220ENST00000492386 SLC25A20O43772 301 aa11.63□□□□□ -0.55
SEMA4D-220ENST00000492386 ODF3L2Q3SX64 289 aa11.63□□□□□ -0.55
SEMA4D-220ENST00000492386 CLUHP3Q96NS8 147 aa11.63□□□□□ -0.55
SEMA4D-220ENST00000492386 XCL2Q9UBD3 114 aa11.63□□□□□ -0.55
SEMA4D-220ENST00000492386 C9JAW5 83 aa11.62□□□□□ -0.55
SEMA4D-220ENST00000492386 M0QXV9 152 aa11.62□□□□□ -0.55
SEMA4D-220ENST00000492386 PRSS2P07478 247 aa11.62□□□□□ -0.55
SEMA4D-220ENST00000492386 LRRC75A-AS1Q8N1F1 130 aa11.62□□□□□ -0.55
SEMA4D-220ENST00000492386 CHD6Q8TD26 2715 aa11.62□□□□□ -0.55
SEMA4D-220ENST00000492386 MIAQ16674 131 aa11.62□□□□□ -0.55
SEMA4D-220ENST00000492386 Q1RN00 199 aa11.62□□□□□ -0.55
SEMA4D-220ENST00000492386 ZFAND6Q6FIF0 208 aa11.62□□□□□ -0.55
SEMA4D-220ENST00000492386 GEMIN7Q9H840 131 aaKnown RBP11.61□□□□□ -0.55
SEMA4D-220ENST00000492386 TRBV30A0A0K0K1B3 111 aa11.61□□□□□ -0.55
SEMA4D-220ENST00000492386 Q6ZSV7 163 aa11.61□□□□□ -0.55
SEMA4D-220ENST00000492386 KRTAP1-3Q8IUG1 177 aa11.61□□□□□ -0.55
SEMA4D-220ENST00000492386 C1orf158Q8N1D5 194 aa11.61□□□□□ -0.55
SEMA4D-220ENST00000492386 CDKN2A-AS1Q9UH64 79 aa11.61□□□□□ -0.55
SEMA4D-220ENST00000492386 IGLV5-45A0A087WSX0 123 aa11.6□□□□□ -0.55
SEMA4D-220ENST00000492386 TRIAP1O43715 76 aa11.6□□□□□ -0.55
SEMA4D-220ENST00000492386 IL17DQ8TAD2 202 aa11.6□□□□□ -0.55
SEMA4D-220ENST00000492386 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.6□□□□□ -0.55
SEMA4D-220ENST00000492386 TIRAPP58753 221 aa11.59□□□□□ -0.55
SEMA4D-220ENST00000492386 ATXN8Q156A1 80 aa11.59□□□□□ -0.55
SEMA4D-220ENST00000492386 EPG5Q9HCE0 2579 aa11.59□□□□□ -0.55
SEMA4D-220ENST00000492386 TLN2Q9Y4G6 2542 aa11.59□□□□□ -0.55
SEMA4D-220ENST00000492386 AKAP9Q99996 3911 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms