RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CYSLTR1Q9Y271 337 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 PHLDA3Q9Y5J5 127 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 STAB2Q8WWQ8 2551 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 DNAH7Q8WXX0 4024 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 SOCS3O14543 225 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 ASIPP42127 132 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 DEFB1P60022 68 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 C2orf66Q6UXQ4 117 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 SH2D6Q7Z4S9 175 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 OR10J6PQ8NGY7 276 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 RASL10AQ92737 203 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 EDA2RQ9HAV5 297 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 MED14OSP0DP75 135 aa6.82□□□□□ -1.32
BRCA1-219ENST00000491747 PRR9Q5T870 116 aa6.82□□□□□ -1.32
BRCA1-219ENST00000491747 SCGB1D4Q6XE38 83 aa6.82□□□□□ -1.32
BRCA1-219ENST00000491747 Q6ZQT7 251 aa6.82□□□□□ -1.32
BRCA1-219ENST00000491747 BAALCQ8WXS3 180 aa6.82□□□□□ -1.32
BRCA1-219ENST00000491747 PRADC1Q9BSG0 188 aa6.82□□□□□ -1.32
BRCA1-219ENST00000491747 MRPL16Q9NX20 251 aaKnown RBP6.82□□□□□ -1.32
BRCA1-219ENST00000491747 LINC01549A6NIU2 74 aa6.82□□□□□ -1.32
BRCA1-219ENST00000491747 DEFB135Q30KP9 77 aa6.82□□□□□ -1.32
BRCA1-219ENST00000491747 PGPEP1Q9NXJ5 209 aa6.82□□□□□ -1.32
BRCA1-219ENST00000491747 PRO0461Q9UI25 63 aa6.82□□□□□ -1.32
BRCA1-219ENST00000491747 A0A1B0GV72 72 aa6.81□□□□□ -1.32
BRCA1-219ENST00000491747 ZNF815PA8K554 130 aa6.81□□□□□ -1.32
BRCA1-219ENST00000491747 J3KRW8 73 aa6.81□□□□□ -1.32
BRCA1-219ENST00000491747 APOC4P55056 127 aa6.81□□□□□ -1.32
BRCA1-219ENST00000491747 MORN3Q6PF18 240 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-219ENST00000491747 TRPT1Q86TN4 253 aaKnown RBP6.81□□□□□ -1.32
BRCA1-219ENST00000491747 ZFAND2AQ8N6M9 145 aa6.81□□□□□ -1.32
BRCA1-219ENST00000491747 C14orf178Q8N769 122 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-219ENST00000491747 KIR2DL5BQ8NHK3 375 aa6.81□□□□□ -1.32
BRCA1-219ENST00000491747 C20orf173Q96LM9 149 aa6.81□□□□□ -1.32
BRCA1-219ENST00000491747 PRSS29PA6NIE9 313 aa6.81□□□□□ -1.32
BRCA1-219ENST00000491747 APOMO95445 188 aa6.81□□□□□ -1.32
BRCA1-219ENST00000491747 MGPP08493 103 aa6.81□□□□□ -1.32
BRCA1-219ENST00000491747 GIG44P09565 113 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-219ENST00000491747 SRSF9Q13242 221 aaKnown RBP eCLIP6.81□□□□□ -1.32
BRCA1-219ENST00000491747 PAPPA-AS1Q5QFB9 102 aa6.81□□□□□ -1.32
BRCA1-219ENST00000491747 LYRM7Q5U5X0 104 aa6.81□□□□□ -1.32
BRCA1-219ENST00000491747 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
BRCA1-219ENST00000491747 STHQ8IWL8 128 aa6.8□□□□□ -1.32
BRCA1-219ENST00000491747 MTURNQ8N3F0 131 aa6.8□□□□□ -1.32
BRCA1-219ENST00000491747 RNF183Q96D59 192 aa6.8□□□□□ -1.32
BRCA1-219ENST00000491747 SPRY2O43597 315 aa6.8□□□□□ -1.32
BRCA1-219ENST00000491747 HERVK_113P61574 105 aa6.8□□□□□ -1.32
BRCA1-219ENST00000491747 SNRPD3P62318 126 aaKnown RBP6.8□□□□□ -1.32
BRCA1-219ENST00000491747 ATP6V0E2Q8NHE4 81 aa6.8□□□□□ -1.32
BRCA1-219ENST00000491747 F6UB75 175 aa6.79□□□□□ -1.32
BRCA1-219ENST00000491747 UBE2D1P51668 147 aa6.79□□□□□ -1.32
BRCA1-219ENST00000491747 ANXA2RQ3ZCQ2 193 aa6.79□□□□□ -1.32
BRCA1-219ENST00000491747 CFAP126Q5VTH2 177 aa6.79□□□□□ -1.32
BRCA1-219ENST00000491747 C1QTNF4Q9BXJ3 329 aa6.79□□□□□ -1.32
BRCA1-219ENST00000491747 CSMD3Q7Z407 3707 aa6.79□□□□□ -1.32
BRCA1-219ENST00000491747 TRBV7-9A0A0J9YWB2 115 aa6.79□□□□□ -1.32
BRCA1-219ENST00000491747 H3BMM0 161 aa6.79□□□□□ -1.32
BRCA1-219ENST00000491747 TP53TG1Q9Y2A0 90 aa6.79□□□□□ -1.32
BRCA1-219ENST00000491747 ID1P41134 155 aa6.78□□□□□ -1.32
BRCA1-219ENST00000491747 FOXI1Q12951 378 aa6.78□□□□□ -1.32
BRCA1-219ENST00000491747 MUC7Q8TAX7 377 aa6.78□□□□□ -1.32
BRCA1-219ENST00000491747 LOC107984156A0A0G2JMH3 177 aa6.77□□□□□ -1.32
BRCA1-219ENST00000491747 RNASE4P34096 147 aaKnown RBP6.77□□□□□ -1.32
BRCA1-219ENST00000491747 RPL32P62910 135 aaKnown RBP6.77□□□□□ -1.32
BRCA1-219ENST00000491747 ARL17AQ8IVW1 177 aa6.77□□□□□ -1.32
BRCA1-219ENST00000491747 DUSP14O95147 198 aaKnown RBP6.77□□□□□ -1.33
BRCA1-219ENST00000491747 TSPAN13O95857 204 aa6.77□□□□□ -1.33
BRCA1-219ENST00000491747 IGKV3-20P01619 116 aa6.77□□□□□ -1.33
BRCA1-219ENST00000491747 RNASE3P12724 160 aaKnown RBP6.77□□□□□ -1.33
BRCA1-219ENST00000491747 PMVKQ15126 192 aa6.77□□□□□ -1.33
BRCA1-219ENST00000491747 POM121L12Q8N7R1 296 aa6.77□□□□□ -1.33
BRCA1-219ENST00000491747 CSNK1G2-AS1Q8NCQ2 148 aa6.77□□□□□ -1.33
BRCA1-219ENST00000491747 PLEKHB2Q96CS7 222 aa6.77□□□□□ -1.33
BRCA1-219ENST00000491747 FAM19A4Q96LR4 140 aa6.77□□□□□ -1.33
BRCA1-219ENST00000491747 A0A0J9YWU9 116 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 NXPH4O95158 308 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 CRYGDP07320 174 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 PSMB2P49721 201 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 UBE2D3P61077 147 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 UBE2D2P62837 147 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 TMEM141Q96I45 108 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 KIR2DL4Q99706 377 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 TRBV20-1A0A075B6N2 111 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 A0A0J9YX75 114 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 A0A0J9YY99 117 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 C11orf86A6NJI1 115 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 GNRH2O43555 120 aa6.76□□□□□ -1.33
BRCA1-219ENST00000491747 IGLV4-69A0A075B6H9 119 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 IGIPA6NJ69 53 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 VCYO14598 125 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 CASC10Q5T4H9 136 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 ZFAND6Q6FIF0 208 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 ZFP2Q6ZN57 461 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 SYT8Q8NBV8 401 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 TIMM17AQ99595 171 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 VCX2Q9H322 139 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 C3orf84H3BNL1 204 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 SMCPP49901 116 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-219ENST00000491747 POLR2KP53803 58 aaKnown RBP6.75□□□□□ -1.33
BRCA1-219ENST00000491747 FAM159AQ6UWV7 190 aa6.75□□□□□ -1.33
BRCA1-219ENST00000491747 XCL2Q9UBD3 114 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms