RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 AMTP48728 403 aa7.49□□□□□ -1.21
FDPS-215ENST00000490140 NKX2-5P52952 324 aaPredicted RBP7.49□□□□□ -1.21
FDPS-215ENST00000490140 SUMO4Q6EEV6 95 aa7.49□□□□□ -1.21
FDPS-215ENST00000490140 NIT2Q9NQR4 276 aa7.49□□□□□ -1.21
FDPS-215ENST00000490140 BIN3Q9NQY0 253 aa7.49□□□□□ -1.21
FDPS-215ENST00000490140 PLAC8Q9NZF1 115 aa7.49□□□□□ -1.21
FDPS-215ENST00000490140 LINC00474Q9P2X8 69 aa7.49□□□□□ -1.21
FDPS-215ENST00000490140 A0A1B0GV50 99 aa7.48□□□□□ -1.21
FDPS-215ENST00000490140 TEX46H3BTG2 121 aa7.48□□□□□ -1.21
FDPS-215ENST00000490140 RPS10P46783 165 aaKnown RBP7.48□□□□□ -1.21
FDPS-215ENST00000490140 OR2D3Q8NGH3 330 aa7.48□□□□□ -1.21
FDPS-215ENST00000490140 CYTL1Q9NRR1 136 aa7.48□□□□□ -1.21
FDPS-215ENST00000490140 KANTRA0A1W2PQU2 76 aa7.47□□□□□ -1.21
FDPS-215ENST00000490140 PHOX2AO14813 284 aa7.47□□□□□ -1.21
FDPS-215ENST00000490140 NDUFS6O75380 124 aaKnown RBP7.47□□□□□ -1.21
FDPS-215ENST00000490140 IGLC6P0CF74 106 aa7.47□□□□□ -1.21
FDPS-215ENST00000490140 CHTF8P0CG12 524 aa7.47□□□□□ -1.21
FDPS-215ENST00000490140 GNG4P50150 75 aa7.47□□□□□ -1.21
FDPS-215ENST00000490140 RAB5CP51148 216 aa7.47□□□□□ -1.21
FDPS-215ENST00000490140 AMMECR1LQ6DCA0 310 aa7.47□□□□□ -1.21
FDPS-215ENST00000490140 IGLV4-60A0A075B6I1 120 aa7.46□□□□□ -1.22
FDPS-215ENST00000490140 IFNA1P01562 189 aa7.46□□□□□ -1.22
FDPS-215ENST00000490140 CENPWQ5EE01 88 aa7.46□□□□□ -1.22
FDPS-215ENST00000490140 GTSF1Q8WW33 167 aa7.46□□□□□ -1.22
FDPS-215ENST00000490140 C11orf52Q96A22 123 aa7.46□□□□□ -1.22
FDPS-215ENST00000490140 GAGE12HA6NDE8 117 aa7.45□□□□□ -1.22
FDPS-215ENST00000490140 H7C423 109 aa7.45□□□□□ -1.22
FDPS-215ENST00000490140 PRR3P79522 188 aaKnown RBP7.45□□□□□ -1.22
FDPS-215ENST00000490140 COX6A2Q02221 97 aa7.45□□□□□ -1.22
FDPS-215ENST00000490140 MAJINQ3KP22 176 aa7.45□□□□□ -1.22
FDPS-215ENST00000490140 REG3GQ6UW15 175 aa7.45□□□□□ -1.22
FDPS-215ENST00000490140 SMIM15Q7Z3B0 74 aa7.45□□□□□ -1.22
FDPS-215ENST00000490140 GNG13Q9P2W3 67 aa7.45□□□□□ -1.22
FDPS-215ENST00000490140 IGKV2-24A0A0C4DH68 120 aa7.44□□□□□ -1.22
FDPS-215ENST00000490140 IGKV3OR2-268A0A0C4DH90 116 aa7.44□□□□□ -1.22
FDPS-215ENST00000490140 G3V3Q6 166 aa7.44□□□□□ -1.22
FDPS-215ENST00000490140 BCL2L11O43521 198 aa7.44□□□□□ -1.22
FDPS-215ENST00000490140 PDE6DO43924 150 aa7.44□□□□□ -1.22
FDPS-215ENST00000490140 NCR2O95944 276 aa7.44□□□□□ -1.22
FDPS-215ENST00000490140 EIF5AL1Q6IS14 154 aaKnown RBP7.44□□□□□ -1.22
FDPS-215ENST00000490140 C15orf56Q8N910 161 aa7.44□□□□□ -1.22
FDPS-215ENST00000490140 LINC01600Q96MT4 127 aa7.44□□□□□ -1.22
FDPS-215ENST00000490140 GFRA4Q9GZZ7 299 aa7.44□□□□□ -1.22
FDPS-215ENST00000490140 GVQW2A0A096LPI5 108 aaPredicted RBP7.43□□□□□ -1.22
FDPS-215ENST00000490140 C19orf71A6NCJ1 209 aa7.43□□□□□ -1.22
FDPS-215ENST00000490140 HMSDA8MTL9 139 aa7.43□□□□□ -1.22
FDPS-215ENST00000490140 APCSP02743 223 aa7.43□□□□□ -1.22
FDPS-215ENST00000490140 ZNF25P17030 456 aaPredicted RBP7.43□□□□□ -1.22
FDPS-215ENST00000490140 CTRLP40313 264 aa7.43□□□□□ -1.22
FDPS-215ENST00000490140 CCL20P78556 96 aa7.43□□□□□ -1.22
FDPS-215ENST00000490140 TEX261Q6UWH6 196 aa7.43□□□□□ -1.22
FDPS-215ENST00000490140 STPG4Q8N801 248 aa7.43□□□□□ -1.22
FDPS-215ENST00000490140 LRP2P98164 4655 aa7.43□□□□□ -1.22
FDPS-215ENST00000490140 TNXBP22105 4242 aa7.42□□□□□ -1.22
FDPS-215ENST00000490140 TRAV1-1A0A0B4J248 108 aa7.42□□□□□ -1.22
FDPS-215ENST00000490140 SLPIP03973 132 aa7.42□□□□□ -1.22
FDPS-215ENST00000490140 NTF3P20783 257 aa7.42□□□□□ -1.22
FDPS-215ENST00000490140 NDUFA5Q16718 116 aa7.42□□□□□ -1.22
FDPS-215ENST00000490140 HIGD2BQ4VC39 106 aa7.42□□□□□ -1.22
FDPS-215ENST00000490140 RNASEKQ6P5S7 137 aaKnown RBP7.42□□□□□ -1.22
FDPS-215ENST00000490140 SPINK6Q6UWN8 80 aa7.42□□□□□ -1.22
FDPS-215ENST00000490140 LYZL1Q6UWQ5 148 aa7.42□□□□□ -1.22
FDPS-215ENST00000490140 SLC7A5P1Q8MH63 180 aa7.42□□□□□ -1.22
FDPS-215ENST00000490140 CHCHD10Q8WYQ3 142 aaPredicted RBP7.42□□□□□ -1.22
FDPS-215ENST00000490140 BTF3L4Q96K17 158 aa7.42□□□□□ -1.22
FDPS-215ENST00000490140 CTAG1AP78358 180 aa7.41□□□□□ -1.22
FDPS-215ENST00000490140 MEF2BQ02080 365 aaPredicted RBP7.41□□□□□ -1.22
FDPS-215ENST00000490140 TWIST1Q15672 202 aa7.41□□□□□ -1.22
FDPS-215ENST00000490140 C9orf62Q8N4C0 152 aa7.41□□□□□ -1.22
FDPS-215ENST00000490140 TMEM101Q96IK0 257 aa7.41□□□□□ -1.22
FDPS-215ENST00000490140 A0A0J9YXV3 536 aa7.4□□□□□ -1.22
FDPS-215ENST00000490140 PRSS3P2Q8NHM4 247 aa7.4□□□□□ -1.22
FDPS-215ENST00000490140 CARD19Q96LW7 228 aa7.4□□□□□ -1.22
FDPS-215ENST00000490140 CNFNQ9BYD5 112 aa7.4□□□□□ -1.22
FDPS-215ENST00000490140 IGHV1-58A0A0C4DH39 117 aa7.39□□□□□ -1.23
FDPS-215ENST00000490140 FGF6P10767 208 aa7.39□□□□□ -1.23
FDPS-215ENST00000490140 TAGLN2P37802 199 aaKnown RBP7.39□□□□□ -1.23
FDPS-215ENST00000490140 Q6ZRP5 223 aa7.39□□□□□ -1.23
FDPS-215ENST00000490140 OR5A1Q8NGJ0 315 aa7.39□□□□□ -1.23
FDPS-215ENST00000490140 LYPD6BQ8NI32 183 aa7.39□□□□□ -1.23
FDPS-215ENST00000490140 MED9Q9NWA0 146 aa7.39□□□□□ -1.23
FDPS-215ENST00000490140 A0A096LNI7 61 aa7.38□□□□□ -1.23
FDPS-215ENST00000490140 SMLR1H3BR10 107 aa7.38□□□□□ -1.23
FDPS-215ENST00000490140 ZNF561-AS1K7EIQ3 104 aa7.38□□□□□ -1.23
FDPS-215ENST00000490140 ISOC2Q96AB3 205 aa7.38□□□□□ -1.23
FDPS-215ENST00000490140 RPP21Q9H633 154 aaKnown RBP7.38□□□□□ -1.23
FDPS-215ENST00000490140 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.37□□□□□ -1.23
FDPS-215ENST00000490140 IGKV2-29A2NJV5 120 aaPredicted RBP7.37□□□□□ -1.23
FDPS-215ENST00000490140 RAB19A4D1S5 217 aa7.37□□□□□ -1.23
FDPS-215ENST00000490140 SDHAF1A6NFY7 115 aa7.37□□□□□ -1.23
FDPS-215ENST00000490140 XCL1P47992 114 aa7.37□□□□□ -1.23
FDPS-215ENST00000490140 SMAGPQ0VAQ4 97 aa7.37□□□□□ -1.23
FDPS-215ENST00000490140 SS18Q15532 418 aa7.37□□□□□ -1.23
FDPS-215ENST00000490140 GATD1Q8NB37 220 aa7.37□□□□□ -1.23
FDPS-215ENST00000490140 MRAP2Q96G30 205 aa7.37□□□□□ -1.23
FDPS-215ENST00000490140 RNF213Q63HN8 5207 aa7.36□□□□□ -1.23
FDPS-215ENST00000490140 TRAV26-2A0A0B4J265 109 aa7.36□□□□□ -1.23
FDPS-215ENST00000490140 I3L3M4 83 aa7.36□□□□□ -1.23
FDPS-215ENST00000490140 BCL2P10415 239 aa7.36□□□□□ -1.23
FDPS-215ENST00000490140 PMCHP20382 165 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms