RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
CHD1L-208ENST00000488864 GNRH2O43555 120 aa9.78□□□□□ -0.84
CHD1L-208ENST00000488864 S100A4P26447 101 aaKnown RBP9.78□□□□□ -0.84
CHD1L-208ENST00000488864 ANXA2RQ3ZCQ2 193 aa9.78□□□□□ -0.84
CHD1L-208ENST00000488864 SHISA2Q6UWI4 295 aa9.78□□□□□ -0.84
CHD1L-208ENST00000488864 Q6ZUT4 128 aa9.78□□□□□ -0.84
CHD1L-208ENST00000488864 A0A0J9YY99 117 aa9.78□□□□□ -0.84
CHD1L-208ENST00000488864 SOCS3O14543 225 aa9.78□□□□□ -0.84
CHD1L-208ENST00000488864 ZNF688P0C7X2 276 aa9.78□□□□□ -0.84
CHD1L-208ENST00000488864 PHLDA3Q9Y5J5 127 aa9.78□□□□□ -0.84
CHD1L-208ENST00000488864 ASIPP42127 132 aa9.77□□□□□ -0.85
CHD1L-208ENST00000488864 TSPEAR-AS2P59090 65 aa9.77□□□□□ -0.85
CHD1L-208ENST00000488864 CFC1BP0CG36 223 aa9.76□□□□□ -0.85
CHD1L-208ENST00000488864 CFC1P0CG37 223 aa9.76□□□□□ -0.85
CHD1L-208ENST00000488864 PPDPFLQ8WWR9 84 aa9.76□□□□□ -0.85
CHD1L-208ENST00000488864 TRAV21A0A0B4J279 112 aa9.76□□□□□ -0.85
CHD1L-208ENST00000488864 F6UB75 175 aa9.76□□□□□ -0.85
CHD1L-208ENST00000488864 RNASE4P34096 147 aaKnown RBP9.76□□□□□ -0.85
CHD1L-208ENST00000488864 TEN1Q86WV5 123 aa9.76□□□□□ -0.85
CHD1L-208ENST00000488864 K7EQG2 157 aa9.75□□□□□ -0.85
CHD1L-208ENST00000488864 KIR2DL4Q99706 377 aa9.75□□□□□ -0.85
CHD1L-208ENST00000488864 TP53TG1Q9Y2A0 90 aa9.75□□□□□ -0.85
CHD1L-208ENST00000488864 IGHV3-30P01768 117 aa9.75□□□□□ -0.85
CHD1L-208ENST00000488864 IGHV3-30-5P0DP03 117 aa9.75□□□□□ -0.85
CHD1L-208ENST00000488864 RNASE3P12724 160 aaKnown RBP9.75□□□□□ -0.85
CHD1L-208ENST00000488864 RPL39P62891 51 aaKnown RBP9.75□□□□□ -0.85
CHD1L-208ENST00000488864 LINC00477Q96M19 166 aa9.75□□□□□ -0.85
CHD1L-208ENST00000488864 LENEPQ9Y5L5 61 aa9.75□□□□□ -0.85
CHD1L-208ENST00000488864 ANK2Q01484 3957 aa9.75□□□□□ -0.85
CHD1L-208ENST00000488864 IGIPA6NJ69 53 aa9.74□□□□□ -0.85
CHD1L-208ENST00000488864 IGLV1-51P01701 117 aa9.74□□□□□ -0.85
CHD1L-208ENST00000488864 SBSPONQ8IVN8 264 aa9.74□□□□□ -0.85
CHD1L-208ENST00000488864 MUC4Q99102 2169 aa9.74□□□□□ -0.85
CHD1L-208ENST00000488864 LINC00315P59091 139 aa9.74□□□□□ -0.85
CHD1L-208ENST00000488864 OR10J6PQ8NGY7 276 aa9.74□□□□□ -0.85
CHD1L-208ENST00000488864 JPT2Q9H910 190 aa9.74□□□□□ -0.85
CHD1L-208ENST00000488864 ID1P41134 155 aa9.73□□□□□ -0.85
CHD1L-208ENST00000488864 SNRPD3P62318 126 aaKnown RBP9.73□□□□□ -0.85
CHD1L-208ENST00000488864 ANKRD29Q8N6D5 301 aa9.73□□□□□ -0.85
CHD1L-208ENST00000488864 ZNF256Q9Y2P7 627 aaPredicted RBP9.73□□□□□ -0.85
CHD1L-208ENST00000488864 ZNRF2Q8NHG8 242 aa9.73□□□□□ -0.85
CHD1L-208ENST00000488864 RNF183Q96D59 192 aa9.73□□□□□ -0.85
CHD1L-208ENST00000488864 AMELXQ99217 191 aa9.73□□□□□ -0.85
CHD1L-208ENST00000488864 KIF25-AS1Q9Y6Z4 181 aa9.73□□□□□ -0.85
CHD1L-208ENST00000488864 A8MWV9 139 aa9.72□□□□□ -0.85
CHD1L-208ENST00000488864 EIF4EBP3O60516 100 aaPredicted RBP9.72□□□□□ -0.85
CHD1L-208ENST00000488864 DEFB131AP59861 70 aa9.72□□□□□ -0.85
CHD1L-208ENST00000488864 HERVK_113P61574 105 aa9.72□□□□□ -0.85
CHD1L-208ENST00000488864 PMVKQ15126 192 aa9.72□□□□□ -0.85
CHD1L-208ENST00000488864 TMEM170BQ5T4T1 132 aa9.72□□□□□ -0.85
CHD1L-208ENST00000488864 SLC25A29Q8N8R3 303 aa9.72□□□□□ -0.85
CHD1L-208ENST00000488864 SVIPQ8NHG7 77 aa9.72□□□□□ -0.85
CHD1L-208ENST00000488864 SCGB1C2P0DMR2 95 aa9.72□□□□□ -0.85
CHD1L-208ENST00000488864 C10orf126Q8N4M7 172 aa9.72□□□□□ -0.85
CHD1L-208ENST00000488864 POM121L12Q8N7R1 296 aa9.72□□□□□ -0.85
CHD1L-208ENST00000488864 FAM19A4Q96LR4 140 aa9.72□□□□□ -0.85
CHD1L-208ENST00000488864 CMYA5Q8N3K9 4069 aa9.71□□□□□ -0.85
CHD1L-208ENST00000488864 LYRM7Q5U5X0 104 aa9.71□□□□□ -0.85
CHD1L-208ENST00000488864 APRG1Q8IVJ8 170 aa9.71□□□□□ -0.85
CHD1L-208ENST00000488864 WFDC9Q8NEX5 89 aa9.71□□□□□ -0.85
CHD1L-208ENST00000488864 TRBV20-1A0A075B6N2 111 aa9.71□□□□□ -0.86
CHD1L-208ENST00000488864 TRAV25A0A0B4J276 109 aa9.71□□□□□ -0.86
CHD1L-208ENST00000488864 IGKV3-20P01619 116 aa9.71□□□□□ -0.86
CHD1L-208ENST00000488864 MED14OSP0DP75 135 aa9.71□□□□□ -0.86
CHD1L-208ENST00000488864 POLR2KP53803 58 aaKnown RBP9.71□□□□□ -0.86
CHD1L-208ENST00000488864 C9orf66Q5T8R8 295 aa9.71□□□□□ -0.86
CHD1L-208ENST00000488864 SUMO4Q6EEV6 95 aa9.71□□□□□ -0.86
CHD1L-208ENST00000488864 PRO1854Q9UHT4 67 aa9.71□□□□□ -0.86
CHD1L-208ENST00000488864 A0A087WWL8 130 aa9.7□□□□□ -0.86
CHD1L-208ENST00000488864 OXLD1Q5BKU9 147 aa9.7□□□□□ -0.86
CHD1L-208ENST00000488864 ERG28Q9UKR5 140 aa9.7□□□□□ -0.86
CHD1L-208ENST00000488864 KNCNA6PVL3 124 aa9.7□□□□□ -0.86
CHD1L-208ENST00000488864 PPP1R17O96001 155 aa9.7□□□□□ -0.86
CHD1L-208ENST00000488864 ODF3L2Q3SX64 289 aa9.7□□□□□ -0.86
CHD1L-208ENST00000488864 PAPPA-AS1Q5QFB9 102 aa9.7□□□□□ -0.86
CHD1L-208ENST00000488864 TRPT1Q86TN4 253 aaKnown RBP9.7□□□□□ -0.86
CHD1L-208ENST00000488864 OPRPNQ99935 248 aaPredicted RBP9.7□□□□□ -0.86
CHD1L-208ENST00000488864 WFDC10AQ9H1F0 79 aa9.7□□□□□ -0.86
CHD1L-208ENST00000488864 MAP6D1Q9H9H5 199 aa9.7□□□□□ -0.86
CHD1L-208ENST00000488864 J3QQQ9 107 aa9.68□□□□□ -0.86
CHD1L-208ENST00000488864 NXPH4O95158 308 aa9.68□□□□□ -0.86
CHD1L-208ENST00000488864 NOTCH1P46531 2555 aa9.68□□□□□ -0.86
CHD1L-208ENST00000488864 MGAM2Q2M2H8 2515 aa9.68□□□□□ -0.86
CHD1L-208ENST00000488864 A4D1N5 150 aa9.68□□□□□ -0.86
CHD1L-208ENST00000488864 C9JAW5 83 aa9.68□□□□□ -0.86
CHD1L-208ENST00000488864 H7C2G1 150 aa9.68□□□□□ -0.86
CHD1L-208ENST00000488864 ZNF876PQ49A33 203 aa9.68□□□□□ -0.86
CHD1L-208ENST00000488864 TMEM141Q96I45 108 aa9.68□□□□□ -0.86
CHD1L-208ENST00000488864 F5H697 171 aa9.67□□□□□ -0.86
CHD1L-208ENST00000488864 TRAV2A0A0B4J234 112 aa9.67□□□□□ -0.86
CHD1L-208ENST00000488864 VCYO14598 125 aa9.67□□□□□ -0.86
CHD1L-208ENST00000488864 SLC25A20O43772 301 aa9.67□□□□□ -0.86
CHD1L-208ENST00000488864 LGALS3P17931 250 aaKnown RBP9.67□□□□□ -0.86
CHD1L-208ENST00000488864 RPL32P62910 135 aaKnown RBP9.67□□□□□ -0.86
CHD1L-208ENST00000488864 TIMM17AQ99595 171 aa9.67□□□□□ -0.86
CHD1L-208ENST00000488864 IGHV3-64A0A075B6Q5 118 aa9.66□□□□□ -0.86
CHD1L-208ENST00000488864 A0A0J9YX75 114 aa9.66□□□□□ -0.86
CHD1L-208ENST00000488864 SDHAF1A6NFY7 115 aa9.66□□□□□ -0.86
CHD1L-208ENST00000488864 IGHV3-33P01772 117 aa9.66□□□□□ -0.86
CHD1L-208ENST00000488864 TMEM263Q8WUH6 116 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms