RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 TNFRSF18Q9Y5U5 241 aa11.96□□□□□ -0.49
MCF2L-226ENST00000486210 SCO1O75880 301 aa11.95□□□□□ -0.5
MCF2L-226ENST00000486210 Q6ZRN7 208 aaPredicted RBP11.95□□□□□ -0.5
MCF2L-226ENST00000486210 SH2D6Q7Z4S9 175 aa11.95□□□□□ -0.5
MCF2L-226ENST00000486210 FRZBQ92765 325 aa11.95□□□□□ -0.5
MCF2L-226ENST00000486210 TRBV24-1A0A075B6N3 115 aa11.94□□□□□ -0.5
MCF2L-226ENST00000486210 OR10J3Q5JRS4 329 aa11.94□□□□□ -0.5
MCF2L-226ENST00000486210 Q5VSD8 79 aa11.94□□□□□ -0.5
MCF2L-226ENST00000486210 NRACQ8N912 160 aa11.94□□□□□ -0.5
MCF2L-226ENST00000486210 GTSF1LQ9H1H1 148 aa11.94□□□□□ -0.5
MCF2L-226ENST00000486210 TRAV9-2A0A087WT02 112 aa11.93□□□□□ -0.5
MCF2L-226ENST00000486210 D6R8Y8 96 aa11.93□□□□□ -0.5
MCF2L-226ENST00000486210 CKS2P33552 79 aa11.93□□□□□ -0.5
MCF2L-226ENST00000486210 DEFB104AQ8WTQ1 72 aa11.93□□□□□ -0.5
MCF2L-226ENST00000486210 TRBV6-5A0A0K0K1A5 114 aa11.92□□□□□ -0.5
MCF2L-226ENST00000486210 NFE4Q86UQ8 179 aa11.92□□□□□ -0.5
MCF2L-226ENST00000486210 GNB1LQ9BYB4 327 aa11.92□□□□□ -0.5
MCF2L-226ENST00000486210 TIRAPP58753 221 aa11.91□□□□□ -0.5
MCF2L-226ENST00000486210 KIAA1644Q3SXP7 199 aa11.91□□□□□ -0.5
MCF2L-226ENST00000486210 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
MCF2L-226ENST00000486210 NPYP01303 97 aa11.9□□□□□ -0.5
MCF2L-226ENST00000486210 HLA-DQA1P01909 254 aa11.9□□□□□ -0.5
MCF2L-226ENST00000486210 APCSP02743 223 aa11.9□□□□□ -0.5
MCF2L-226ENST00000486210 NTM-AS1Q6ZSK4 140 aa11.9□□□□□ -0.5
MCF2L-226ENST00000486210 DAZ4Q86SG3 579 aaKnown RBP11.9□□□□□ -0.5
MCF2L-226ENST00000486210 ST20Q9HBF5 79 aa11.9□□□□□ -0.5
MCF2L-226ENST00000486210 DAZ3Q9NR90 486 aaKnown RBP11.9□□□□□ -0.5
MCF2L-226ENST00000486210 PGPEP1Q9NXJ5 209 aa11.9□□□□□ -0.5
MCF2L-226ENST00000486210 FLG2Q5D862 2391 aaPredicted RBP11.9□□□□□ -0.51
MCF2L-226ENST00000486210 TNFRSF6BO95407 300 aa11.89□□□□□ -0.51
MCF2L-226ENST00000486210 S100A1P23297 94 aa11.89□□□□□ -0.51
MCF2L-226ENST00000486210 COX19Q49B96 90 aa11.89□□□□□ -0.51
MCF2L-226ENST00000486210 LELP1Q5T871 98 aa11.89□□□□□ -0.51
MCF2L-226ENST00000486210 ORMDL3Q8N138 153 aa11.89□□□□□ -0.51
MCF2L-226ENST00000486210 PRELID3AQ96N28 172 aa11.89□□□□□ -0.51
MCF2L-226ENST00000486210 TMEM70Q9BUB7 260 aa11.89□□□□□ -0.51
MCF2L-226ENST00000486210 MRPL18Q9H0U6 180 aaKnown RBP11.89□□□□□ -0.51
MCF2L-226ENST00000486210 PPBPP02775 128 aa11.88□□□□□ -0.51
MCF2L-226ENST00000486210 POLR2KP53803 58 aaKnown RBP11.88□□□□□ -0.51
MCF2L-226ENST00000486210 WFDC10BQ8IUB3 73 aa11.88□□□□□ -0.51
MCF2L-226ENST00000486210 K7EP13 123 aa11.87□□□□□ -0.51
MCF2L-226ENST00000486210 KRTAP10-1P60331 282 aa11.87□□□□□ -0.51
MCF2L-226ENST00000486210 SUMO2P61956 95 aaKnown RBP11.87□□□□□ -0.51
MCF2L-226ENST00000486210 CDPF1Q6NVV7 123 aa11.87□□□□□ -0.51
MCF2L-226ENST00000486210 TRAPPC1Q9Y5R8 145 aa11.87□□□□□ -0.51
MCF2L-226ENST00000486210 TRBV6-8A0A0A6YYG3 113 aa11.86□□□□□ -0.51
MCF2L-226ENST00000486210 COLCA2A8K830 154 aa11.86□□□□□ -0.51
MCF2L-226ENST00000486210 PPP1R17O96001 155 aa11.86□□□□□ -0.51
MCF2L-226ENST00000486210 MT-ND6P03923 174 aa11.86□□□□□ -0.51
MCF2L-226ENST00000486210 FABP9Q0Z7S8 132 aa11.86□□□□□ -0.51
MCF2L-226ENST00000486210 PMCHP20382 165 aa11.85□□□□□ -0.51
MCF2L-226ENST00000486210 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-226ENST00000486210 C20orf78Q9BR46 151 aa11.85□□□□□ -0.51
MCF2L-226ENST00000486210 TRBV27A0A0K0K1C4 114 aa11.84□□□□□ -0.51
MCF2L-226ENST00000486210 I3L3M4 83 aa11.84□□□□□ -0.51
MCF2L-226ENST00000486210 PHOX2AO14813 284 aa11.84□□□□□ -0.51
MCF2L-226ENST00000486210 TSHBP01222 138 aa11.84□□□□□ -0.51
MCF2L-226ENST00000486210 SMR3BP02814 79 aaPredicted RBP11.84□□□□□ -0.51
MCF2L-226ENST00000486210 COTL1Q14019 142 aa11.84□□□□□ -0.51
MCF2L-226ENST00000486210 C10orf126Q8N4M7 172 aa11.84□□□□□ -0.51
MCF2L-226ENST00000486210 TRAV8-6A0A0B4J262 113 aa11.83□□□□□ -0.52
MCF2L-226ENST00000486210 VCYO14598 125 aa11.83□□□□□ -0.52
MCF2L-226ENST00000486210 DNAH10OSP0CZ25 163 aa11.83□□□□□ -0.52
MCF2L-226ENST00000486210 Q8N3U1 123 aa11.83□□□□□ -0.52
MCF2L-226ENST00000486210 ALKBH7Q9BT30 221 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-226ENST00000486210 DNAH8Q96JB1 4490 aa11.82□□□□□ -0.52
MCF2L-226ENST00000486210 IGHV1-24A0A0C4DH33 117 aa11.82□□□□□ -0.52
MCF2L-226ENST00000486210 LOC389332A0A1B0GUA5 103 aa11.82□□□□□ -0.52
MCF2L-226ENST00000486210 RPL32P62910 135 aaKnown RBP11.82□□□□□ -0.52
MCF2L-226ENST00000486210 IQCJQ1A5X6 159 aa11.82□□□□□ -0.52
MCF2L-226ENST00000486210 TMEM97Q5BJF2 176 aa11.82□□□□□ -0.52
MCF2L-226ENST00000486210 SMIM2Q9BVW6 85 aa11.82□□□□□ -0.52
MCF2L-226ENST00000486210 LAMTOR2Q9Y2Q5 125 aa11.82□□□□□ -0.52
MCF2L-226ENST00000486210 TRBV25-1A0A075B6N4 114 aa11.81□□□□□ -0.52
MCF2L-226ENST00000486210 PRSS47A8MTI9 375 aa11.81□□□□□ -0.52
MCF2L-226ENST00000486210 CHCHD7Q9BUK0 85 aa11.81□□□□□ -0.52
MCF2L-226ENST00000486210 A0A087WTM6 91 aa11.8□□□□□ -0.52
MCF2L-226ENST00000486210 AMTP48728 403 aa11.8□□□□□ -0.52
MCF2L-226ENST00000486210 NIT1Q86X76 327 aa11.8□□□□□ -0.52
MCF2L-226ENST00000486210 CHCHD5Q9BSY4 110 aa11.8□□□□□ -0.52
MCF2L-226ENST00000486210 MAP1LC3AQ9H492 121 aa11.8□□□□□ -0.52
MCF2L-226ENST00000486210 TCAPO15273 167 aa11.79□□□□□ -0.52
MCF2L-226ENST00000486210 IGHV3-30P01768 117 aa11.79□□□□□ -0.52
MCF2L-226ENST00000486210 IGHV3-33P01772 117 aa11.79□□□□□ -0.52
MCF2L-226ENST00000486210 IGHV3-30-3P0DP02 117 aa11.79□□□□□ -0.52
MCF2L-226ENST00000486210 IGHV3-30-5P0DP03 117 aa11.79□□□□□ -0.52
MCF2L-226ENST00000486210 RAB5AP20339 215 aa11.79□□□□□ -0.52
MCF2L-226ENST00000486210 HAMPP81172 84 aa11.79□□□□□ -0.52
MCF2L-226ENST00000486210 GAGE6Q13070 117 aa11.79□□□□□ -0.52
MCF2L-226ENST00000486210 TMEM243Q9BU79 118 aa11.79□□□□□ -0.52
MCF2L-226ENST00000486210 SRRM2Q9UQ35 2752 aaKnown RBP11.79□□□□□ -0.52
MCF2L-226ENST00000486210 PSCAO43653 123 aa11.78□□□□□ -0.52
MCF2L-226ENST00000486210 TRGC2P03986 189 aa11.78□□□□□ -0.52
MCF2L-226ENST00000486210 LINC01556Q5JQF7 62 aa11.78□□□□□ -0.52
MCF2L-226ENST00000486210 KIR2DL4Q99706 377 aa11.78□□□□□ -0.52
MCF2L-226ENST00000486210 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.77□□□□□ -0.53
MCF2L-226ENST00000486210 IGKV2-29A2NJV5 120 aaPredicted RBP11.77□□□□□ -0.53
MCF2L-226ENST00000486210 TMEM262E9PQX1 116 aa11.77□□□□□ -0.53
MCF2L-226ENST00000486210 ESDP10768 282 aa11.77□□□□□ -0.53
MCF2L-226ENST00000486210 FCER1GP30273 86 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms