RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 MSRB1Q9NZV6 116 aa7.89□□□□□ -1.15
DDX56-212ENST00000485367 RYR3Q15413 4870 aa7.89□□□□□ -1.15
DDX56-212ENST00000485367 IGHV3-49A0A0A0MS15 119 aa7.89□□□□□ -1.15
DDX56-212ENST00000485367 SLC50A1Q9BRV3 221 aa7.89□□□□□ -1.15
DDX56-212ENST00000485367 C5orf47Q569G3 176 aa7.88□□□□□ -1.15
DDX56-212ENST00000485367 MORN3Q6PF18 240 aaPredicted RBP7.88□□□□□ -1.15
DDX56-212ENST00000485367 Q8TAT8 98 aa7.88□□□□□ -1.15
DDX56-212ENST00000485367 PPDPFLQ8WWR9 84 aa7.88□□□□□ -1.15
DDX56-212ENST00000485367 MRPL53Q96EL3 112 aaKnown RBP7.88□□□□□ -1.15
DDX56-212ENST00000485367 TMEM126AQ9H061 195 aa7.88□□□□□ -1.15
DDX56-212ENST00000485367 TENM2Q9NT68 2774 aa7.87□□□□□ -1.15
DDX56-212ENST00000485367 TRBV20-1A0A075B6N2 111 aa7.87□□□□□ -1.15
DDX56-212ENST00000485367 IGHV3OR16-13A0A075B7E8 117 aa7.87□□□□□ -1.15
DDX56-212ENST00000485367 IGHV3-74A0A0B4J1X5 117 aa7.87□□□□□ -1.15
DDX56-212ENST00000485367 IGHV7-4-1A0A0J9YVY3 117 aa7.87□□□□□ -1.15
DDX56-212ENST00000485367 LINC01549A6NIU2 74 aa7.87□□□□□ -1.15
DDX56-212ENST00000485367 AMTNQ6UX39 209 aa7.87□□□□□ -1.15
DDX56-212ENST00000485367 RHPN1-AS1Q9BWJ2 59 aa7.87□□□□□ -1.15
DDX56-212ENST00000485367 GAS8-AS1O95177 125 aa7.87□□□□□ -1.15
DDX56-212ENST00000485367 UBE2D1P51668 147 aa7.87□□□□□ -1.15
DDX56-212ENST00000485367 TOMM6Q96B49 74 aa7.87□□□□□ -1.15
DDX56-212ENST00000485367 IGKV3-7A0A075B6H7 116 aa7.86□□□□□ -1.15
DDX56-212ENST00000485367 M0QXV9 152 aa7.86□□□□□ -1.15
DDX56-212ENST00000485367 NDUFV3P56181 108 aaKnown RBP7.86□□□□□ -1.15
DDX56-212ENST00000485367 UBE2D3P61077 147 aa7.86□□□□□ -1.15
DDX56-212ENST00000485367 UBE2D2P62837 147 aa7.86□□□□□ -1.15
DDX56-212ENST00000485367 ODF3L2Q3SX64 289 aa7.86□□□□□ -1.15
DDX56-212ENST00000485367 SMIM2Q9BVW6 85 aa7.86□□□□□ -1.15
DDX56-212ENST00000485367 IGKV3D-20A0A0C4DH25 116 aa7.85□□□□□ -1.15
DDX56-212ENST00000485367 PRSS29PA6NIE9 313 aa7.85□□□□□ -1.15
DDX56-212ENST00000485367 GATA1P15976 413 aaPredicted RBP7.85□□□□□ -1.15
DDX56-212ENST00000485367 ASIPP42127 132 aa7.85□□□□□ -1.15
DDX56-212ENST00000485367 PAPPA-AS1Q5QFB9 102 aa7.85□□□□□ -1.15
DDX56-212ENST00000485367 TEN1Q86WV5 123 aa7.85□□□□□ -1.15
DDX56-212ENST00000485367 NEXN-AS1Q8NBZ9 246 aa7.85□□□□□ -1.15
DDX56-212ENST00000485367 PTH2Q96A98 100 aa7.85□□□□□ -1.15
DDX56-212ENST00000485367 IGHV3-66A0A0C4DH42 116 aa7.84□□□□□ -1.15
DDX56-212ENST00000485367 PPP1R17O96001 155 aa7.84□□□□□ -1.15
DDX56-212ENST00000485367 RPL35AP18077 110 aaKnown RBP7.84□□□□□ -1.15
DDX56-212ENST00000485367 APOC4P55056 127 aa7.84□□□□□ -1.15
DDX56-212ENST00000485367 TMEM78Q5T7P6 136 aa7.84□□□□□ -1.15
DDX56-212ENST00000485367 OVOL2Q9BRP0 275 aa7.84□□□□□ -1.15
DDX56-212ENST00000485367 CSMD3Q7Z407 3707 aa7.84□□□□□ -1.15
DDX56-212ENST00000485367 SMCPP49901 116 aaPredicted RBP7.84□□□□□ -1.15
DDX56-212ENST00000485367 ERCC8Q13216 396 aa7.84□□□□□ -1.15
DDX56-212ENST00000485367 APRG1Q8IVJ8 170 aa7.84□□□□□ -1.15
DDX56-212ENST00000485367 IL17DQ8TAD2 202 aa7.84□□□□□ -1.15
DDX56-212ENST00000485367 SCGB3A1Q96QR1 104 aa7.84□□□□□ -1.15
DDX56-212ENST00000485367 ZFAND3Q9H8U3 227 aa7.84□□□□□ -1.15
DDX56-212ENST00000485367 LENEPQ9Y5L5 61 aa7.84□□□□□ -1.15
DDX56-212ENST00000485367 M0R381 172 aa7.83□□□□□ -1.16
DDX56-212ENST00000485367 ZNF688P0C7X2 276 aa7.83□□□□□ -1.16
DDX56-212ENST00000485367 ID1P41134 155 aa7.83□□□□□ -1.16
DDX56-212ENST00000485367 RPL11P62913 178 aaKnown RBP7.83□□□□□ -1.16
DDX56-212ENST00000485367 NFE4Q86UQ8 179 aa7.83□□□□□ -1.16
DDX56-212ENST00000485367 STARD9Q9P2P6 4700 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 SPRY2O43597 315 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 CMC4P56277 68 aaPredicted RBP7.82□□□□□ -1.16
DDX56-212ENST00000485367 HERVK_113P61574 105 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 SPANXN1Q5VSR9 72 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 C9orf47Q6ZRZ4 202 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 PRADC1Q9BSG0 188 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 SACSQ9NZJ4 4579 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 LCE6AA0A183 80 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 ZNF815PA8K554 130 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 BUB3O43684 328 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 PRB4P10163 310 aaPredicted RBP7.82□□□□□ -1.16
DDX56-212ENST00000485367 IFITM1P13164 125 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 HLA-DMBP28068 263 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 SUMO2P61956 95 aaKnown RBP7.82□□□□□ -1.16
DDX56-212ENST00000485367 GAGE2BQ13066 116 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 DEFB135Q30KP9 77 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 GAGE2EQ4V326 116 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 KIR2DL5BQ8NHK3 375 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 METTL26Q96S19 204 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 GAGE2DQ9UEU5 116 aa7.82□□□□□ -1.16
DDX56-212ENST00000485367 A8MWV9 139 aa7.81□□□□□ -1.16
DDX56-212ENST00000485367 MED14OSP0DP75 135 aa7.81□□□□□ -1.16
DDX56-212ENST00000485367 PSMB2P49721 201 aa7.81□□□□□ -1.16
DDX56-212ENST00000485367 SRSF9Q13242 221 aaKnown RBP eCLIP7.81□□□□□ -1.16
DDX56-212ENST00000485367 BAALCQ8WXS3 180 aa7.81□□□□□ -1.16
DDX56-212ENST00000485367 AGPAT4-IT1Q9H0P7 198 aa7.81□□□□□ -1.16
DDX56-212ENST00000485367 MAP6D1Q9H9H5 199 aa7.81□□□□□ -1.16
DDX56-212ENST00000485367 SPANXCQ9NY87 97 aa7.81□□□□□ -1.16
DDX56-212ENST00000485367 MDFICQ9P1T7 246 aa7.81□□□□□ -1.16
DDX56-212ENST00000485367 PRAC2D3DTV9 90 aa7.8□□□□□ -1.16
DDX56-212ENST00000485367 CCDC179H3BU77 68 aa7.8□□□□□ -1.16
DDX56-212ENST00000485367 DNAJC30Q96LL9 226 aa7.8□□□□□ -1.16
DDX56-212ENST00000485367 CARD19Q96LW7 228 aa7.8□□□□□ -1.16
DDX56-212ENST00000485367 C11orf21Q9P2W6 132 aa7.8□□□□□ -1.16
DDX56-212ENST00000485367 TP53TG1Q9Y2A0 90 aa7.8□□□□□ -1.16
DDX56-212ENST00000485367 CSDC2Q9Y534 153 aaKnown RBP7.8□□□□□ -1.16
DDX56-212ENST00000485367 RYR2Q92736 4967 aa7.79□□□□□ -1.16
DDX56-212ENST00000485367 LOC107984156A0A0G2JMH3 177 aa7.79□□□□□ -1.16
DDX56-212ENST00000485367 A0A0J9YWU9 116 aa7.79□□□□□ -1.16
DDX56-212ENST00000485367 ARL17AQ8IVW1 177 aa7.79□□□□□ -1.16
DDX56-212ENST00000485367 DPH3P1Q9H4G8 78 aa7.79□□□□□ -1.16
DDX56-212ENST00000485367 AGRNO00468 2067 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms