RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 IGLV5-39A0A0G2JS06 123 aa5.63□□□□□ -1.51
SNX13-208ENST00000482558 TRBV27A0A0K0K1C4 114 aa5.63□□□□□ -1.51
SNX13-208ENST00000482558 F8VRH5 84 aa5.63□□□□□ -1.51
SNX13-208ENST00000482558 J3QKU1 62 aa5.63□□□□□ -1.51
SNX13-208ENST00000482558 FGF6P10767 208 aa5.63□□□□□ -1.51
SNX13-208ENST00000482558 RHOHQ15669 191 aa5.63□□□□□ -1.51
SNX13-208ENST00000482558 MPV17L2Q567V2 206 aa5.63□□□□□ -1.51
SNX13-208ENST00000482558 C10orf25Q5T742 122 aa5.63□□□□□ -1.51
SNX13-208ENST00000482558 OR11H1Q8NG94 326 aa5.63□□□□□ -1.51
SNX13-208ENST00000482558 FAM218AQ96MZ4 157 aa5.63□□□□□ -1.51
SNX13-208ENST00000482558 C18orf15Q96N68 181 aa5.63□□□□□ -1.51
SNX13-208ENST00000482558 C16orf95Q9H693 158 aa5.63□□□□□ -1.51
SNX13-208ENST00000482558 ZNF256Q9Y2P7 627 aaPredicted RBP5.63□□□□□ -1.51
SNX13-208ENST00000482558 TRAV26-2A0A0B4J265 109 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 A8MWV9 139 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 GAS8-AS1O95177 125 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 POLR2KP53803 58 aaKnown RBP5.62□□□□□ -1.51
SNX13-208ENST00000482558 LINC00315P59091 139 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
SNX13-208ENST00000482558 LINC00242Q5T6M2 205 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 C10orf99Q6UWK7 81 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 AMTNQ6UX39 209 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 C2orf66Q6UXQ4 117 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 TIMM17AQ99595 171 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 Q9UF83 564 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 HHLA3Q9XRX5 114 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 COL12A1Q99715 3063 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 PTPN13Q12923 2485 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 ZFYVE26Q68DK2 2539 aa5.62□□□□□ -1.51
SNX13-208ENST00000482558 LOC100131303A0A0U1RQF7 123 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 F5H768 121 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 H3BMM0 161 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 MAST4O15021 2626 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 NMUP48645 174 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 CRYBA4P53673 196 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 RIPPLY3P57055 190 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 FXYD7P58549 80 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 HERVK_113P61574 105 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 DEFB114Q30KQ6 69 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 Q6ZQT7 251 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 C2orf91Q6ZV80 131 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 FAM19A1Q7Z5A9 133 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 KLHL30-AS1Q8NEE0 82 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 SPATA3Q8NHX4 192 aa5.61□□□□□ -1.51
SNX13-208ENST00000482558 GCN1Q92616 2671 aaKnown RBP5.61□□□□□ -1.51
SNX13-208ENST00000482558 SDHAF1A6NFY7 115 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 DNAJC9-AS1A6NH13 148 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 H3BRM9 83 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 M0R2P5 195 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 TSHBP01222 138 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 INSP01308 110 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 DEFB131AP59861 70 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 DEFB1P60022 68 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 SPINK13Q1W4C9 94 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 NSUN5P1Q3KNT7 163 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 ZNF876PQ49A33 203 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 ZC2HC1BQ5TFG8 222 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 ZFP2Q6ZN57 461 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 ZNF418Q8TF45 676 aaPredicted RBP5.6□□□□□ -1.51
SNX13-208ENST00000482558 RPL39LQ96EH5 51 aaKnown RBP5.6□□□□□ -1.51
SNX13-208ENST00000482558 DNAJC30Q96LL9 226 aa5.6□□□□□ -1.51
SNX13-208ENST00000482558 MRPL35Q9NZE8 188 aaKnown RBP5.6□□□□□ -1.51
SNX13-208ENST00000482558 A0A1B0GWB2 263 aa5.59□□□□□ -1.51
SNX13-208ENST00000482558 OR11H12B2RN74 326 aa5.59□□□□□ -1.51
SNX13-208ENST00000482558 I3L3M4 83 aa5.59□□□□□ -1.51
SNX13-208ENST00000482558 M0QY20 66 aa5.59□□□□□ -1.51
SNX13-208ENST00000482558 CRYGDP07320 174 aa5.59□□□□□ -1.51
SNX13-208ENST00000482558 PLA2G2AP14555 144 aa5.59□□□□□ -1.51
SNX13-208ENST00000482558 CD164Q04900 197 aa5.59□□□□□ -1.51
SNX13-208ENST00000482558 PMVKQ15126 192 aa5.59□□□□□ -1.51
SNX13-208ENST00000482558 ZNF56Q15929 161 aa5.59□□□□□ -1.51
SNX13-208ENST00000482558 TMEM61Q8N0U2 210 aa5.59□□□□□ -1.51
SNX13-208ENST00000482558 WFDC11Q8NEX6 87 aa5.59□□□□□ -1.51
SNX13-208ENST00000482558 OR11H2Q8NH07 326 aa5.59□□□□□ -1.51
SNX13-208ENST00000482558 TRAV12-2A0A075B6T6 113 aa5.58□□□□□ -1.52
SNX13-208ENST00000482558 E9PLD3 99 aa5.58□□□□□ -1.52
SNX13-208ENST00000482558 TAX1BP3O14907 124 aa5.58□□□□□ -1.52
SNX13-208ENST00000482558 IGKV3-20P01619 116 aa5.58□□□□□ -1.52
SNX13-208ENST00000482558 PRSS2P07478 247 aa5.58□□□□□ -1.52
SNX13-208ENST00000482558 KRTAP5-11Q6L8G4 156 aa5.58□□□□□ -1.52
SNX13-208ENST00000482558 GTF2H5Q6ZYL4 71 aa5.58□□□□□ -1.52
SNX13-208ENST00000482558 KIR2DL5BQ8NHK3 375 aa5.58□□□□□ -1.52
SNX13-208ENST00000482558 DUX3Q96PT4 197 aa5.58□□□□□ -1.52
SNX13-208ENST00000482558 MDFICQ9P1T7 246 aa5.58□□□□□ -1.52
SNX13-208ENST00000482558 UTP20O75691 2785 aaKnown RBP5.57□□□□□ -1.52
SNX13-208ENST00000482558 TRBV25-1A0A075B6N4 114 aa5.57□□□□□ -1.52
SNX13-208ENST00000482558 IGIPA6NJ69 53 aa5.57□□□□□ -1.52
SNX13-208ENST00000482558 SMIM13P0DJ93 91 aa5.57□□□□□ -1.52
SNX13-208ENST00000482558 SMAGPQ0VAQ4 97 aa5.57□□□□□ -1.52
SNX13-208ENST00000482558 FAM74A4Q5TZK3 123 aa5.57□□□□□ -1.52
SNX13-208ENST00000482558 GTSCR1Q86UQ5 136 aa5.57□□□□□ -1.52
SNX13-208ENST00000482558 PCP2Q8IVA1 136 aa5.57□□□□□ -1.52
SNX13-208ENST00000482558 Q8N9P0 234 aaPredicted RBP5.57□□□□□ -1.52
SNX13-208ENST00000482558 CHAC1Q9BUX1 264 aa5.57□□□□□ -1.52
SNX13-208ENST00000482558 TP53TG1Q9Y2A0 90 aa5.57□□□□□ -1.52
SNX13-208ENST00000482558 PYGO1Q9Y3Y4 419 aa5.57□□□□□ -1.52
SNX13-208ENST00000482558 MYMXA0A1B0GTQ4 84 aa5.56□□□□□ -1.52
SNX13-208ENST00000482558 C11orf86A6NJI1 115 aa5.56□□□□□ -1.52
SNX13-208ENST00000482558 KNCNA6PVL3 124 aa5.56□□□□□ -1.52
SNX13-208ENST00000482558 DEFB136Q30KP8 78 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms