RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ELANEP08246 267 aa9.46□□□□□ -0.9
VPS52-218ENST00000482399 UBE2D3P61077 147 aa9.46□□□□□ -0.9
VPS52-218ENST00000482399 UBE2D2P62837 147 aa9.46□□□□□ -0.9
VPS52-218ENST00000482399 UBE2WQ96B02 151 aa9.46□□□□□ -0.9
VPS52-218ENST00000482399 LEPROTO15243 131 aa9.45□□□□□ -0.9
VPS52-218ENST00000482399 C20orf203Q8NBC4 194 aa9.45□□□□□ -0.9
VPS52-218ENST00000482399 TOMM7Q9P0U1 55 aa9.45□□□□□ -0.9
VPS52-218ENST00000482399 ACANP16112 2415 aa9.45□□□□□ -0.9
VPS52-218ENST00000482399 A0A0J9YXY3 114 aa9.45□□□□□ -0.9
VPS52-218ENST00000482399 M0QY20 66 aa9.45□□□□□ -0.9
VPS52-218ENST00000482399 HERV-K104P63124 156 aa9.45□□□□□ -0.9
VPS52-218ENST00000482399 UBE2E2Q96LR5 201 aa9.45□□□□□ -0.9
VPS52-218ENST00000482399 ANKRD17O75179 2603 aaKnown RBP9.45□□□□□ -0.9
VPS52-218ENST00000482399 FLNCQ14315 2725 aa9.45□□□□□ -0.9
VPS52-218ENST00000482399 IGHV4-30-2A0A087WSY4 118 aa9.44□□□□□ -0.9
VPS52-218ENST00000482399 TRIAP1O43715 76 aa9.44□□□□□ -0.9
VPS52-218ENST00000482399 ATP6V0E2Q8NHE4 81 aa9.44□□□□□ -0.9
VPS52-218ENST00000482399 RNF223E7ERA6 249 aa9.44□□□□□ -0.9
VPS52-218ENST00000482399 RS1O15537 224 aa9.44□□□□□ -0.9
VPS52-218ENST00000482399 CRLF1O75462 422 aa9.44□□□□□ -0.9
VPS52-218ENST00000482399 DYNLRB2Q8TF09 96 aa9.44□□□□□ -0.9
VPS52-218ENST00000482399 Q9UF83 564 aa9.44□□□□□ -0.9
VPS52-218ENST00000482399 IGLV4-3A0A075B6K6 122 aa9.43□□□□□ -0.9
VPS52-218ENST00000482399 LINC00315P59091 139 aa9.43□□□□□ -0.9
VPS52-218ENST00000482399 TMEM223A0PJW6 202 aa9.43□□□□□ -0.9
VPS52-218ENST00000482399 SOCS3O14543 225 aa9.43□□□□□ -0.9
VPS52-218ENST00000482399 IGHG2P01859 326 aa9.43□□□□□ -0.9
VPS52-218ENST00000482399 TRBV27A0A0K0K1C4 114 aa9.42□□□□□ -0.9
VPS52-218ENST00000482399 CIRBPQ14011 172 aaKnown RBP9.42□□□□□ -0.9
VPS52-218ENST00000482399 XCL2Q9UBD3 114 aa9.42□□□□□ -0.9
VPS52-218ENST00000482399 IGHV4OR15-8A0A075B7B6 117 aa9.42□□□□□ -0.9
VPS52-218ENST00000482399 A0A087WW49 117 aa9.42□□□□□ -0.9
VPS52-218ENST00000482399 A0A1W2PRX2 142 aa9.42□□□□□ -0.9
VPS52-218ENST00000482399 GAGE5Q13069 117 aa9.42□□□□□ -0.9
VPS52-218ENST00000482399 GAGE6Q13070 117 aa9.42□□□□□ -0.9
VPS52-218ENST00000482399 APRG1Q8IVJ8 170 aa9.42□□□□□ -0.9
VPS52-218ENST00000482399 KIF25-AS1Q9Y6Z4 181 aa9.42□□□□□ -0.9
VPS52-218ENST00000482399 TRGV11A0A075B6L2 103 aa9.41□□□□□ -0.9
VPS52-218ENST00000482399 MSMBP08118 114 aa9.41□□□□□ -0.9
VPS52-218ENST00000482399 IFITM1P13164 125 aa9.41□□□□□ -0.9
VPS52-218ENST00000482399 A0A0J9YX75 114 aa9.41□□□□□ -0.9
VPS52-218ENST00000482399 KLLNB2CW77 178 aa9.41□□□□□ -0.9
VPS52-218ENST00000482399 UCNP55089 124 aa9.41□□□□□ -0.9
VPS52-218ENST00000482399 SMIM20Q8N5G0 67 aa9.41□□□□□ -0.9
VPS52-218ENST00000482399 ICOSQ9Y6W8 199 aa9.41□□□□□ -0.9
VPS52-218ENST00000482399 LINC01619G3V211 115 aa9.41□□□□□ -0.9
VPS52-218ENST00000482399 DEFB112Q30KQ8 113 aa9.41□□□□□ -0.9
VPS52-218ENST00000482399 BSNQ9UPA5 3926 aa9.4□□□□□ -0.9
VPS52-218ENST00000482399 MED14OSP0DP75 135 aa9.4□□□□□ -0.9
VPS52-218ENST00000482399 DCANP1Q8TF63 244 aa9.4□□□□□ -0.9
VPS52-218ENST00000482399 RHOHQ15669 191 aa9.4□□□□□ -0.9
VPS52-218ENST00000482399 ADAMTSL4-AS1Q5T5F5 129 aa9.4□□□□□ -0.9
VPS52-218ENST00000482399 TMEM263Q8WUH6 116 aaKnown RBP9.39□□□□□ -0.91
VPS52-218ENST00000482399 TRGV1A0A0A0MS02 117 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 HOXD3P31249 432 aaPredicted RBP9.39□□□□□ -0.91
VPS52-218ENST00000482399 SLURP1P55000 103 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 CFHR3Q02985 330 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 PRIMA1Q86XR5 153 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 GAGE12JA6NER3 117 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 CCDC179H3BU77 68 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 GAGE7O76087 117 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 AVPP01185 164 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 GAGE12FP0CL80 117 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 GAGE12GP0CL81 117 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 GAGE12IP0CL82 117 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 GAGE4Q13068 117 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 ZNF462Q96JM2 2506 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 Q9H8V8 135 aa9.39□□□□□ -0.91
VPS52-218ENST00000482399 LGALS9O00182 355 aa9.38□□□□□ -0.91
VPS52-218ENST00000482399 CDKN2A-AS1Q9UH64 79 aa9.38□□□□□ -0.91
VPS52-218ENST00000482399 C11orf68Q9H3H3 251 aaKnown RBP9.38□□□□□ -0.91
VPS52-218ENST00000482399 NDUFV3P56181 108 aaKnown RBP9.38□□□□□ -0.91
VPS52-218ENST00000482399 DOPEY1Q5JWR5 2465 aa9.37□□□□□ -0.91
VPS52-218ENST00000482399 TRBV10-2A0A0K0K1G8 114 aa9.37□□□□□ -0.91
VPS52-218ENST00000482399 A6NDX4 124 aa9.37□□□□□ -0.91
VPS52-218ENST00000482399 CITED1Q99966 193 aa9.37□□□□□ -0.91
VPS52-218ENST00000482399 NDUFA7O95182 113 aa9.36□□□□□ -0.91
VPS52-218ENST00000482399 LINC00467Q9BRT7 94 aa9.36□□□□□ -0.91
VPS52-218ENST00000482399 IGHV1-58A0A0C4DH39 117 aa9.36□□□□□ -0.91
VPS52-218ENST00000482399 CHCHD5Q9BSY4 110 aa9.36□□□□□ -0.91
VPS52-218ENST00000482399 CHD6Q8TD26 2715 aa9.35□□□□□ -0.91
VPS52-218ENST00000482399 A0A0B4J2C4 111 aa9.35□□□□□ -0.91
VPS52-218ENST00000482399 NBL1P41271 181 aa9.35□□□□□ -0.91
VPS52-218ENST00000482399 C19orf54Q5BKX5 351 aa9.35□□□□□ -0.91
VPS52-218ENST00000482399 OR13C6PQ8NH95 151 aa9.35□□□□□ -0.91
VPS52-218ENST00000482399 B4DSR2 109 aa9.35□□□□□ -0.91
VPS52-218ENST00000482399 POM121L12Q8N7R1 296 aa9.35□□□□□ -0.91
VPS52-218ENST00000482399 UTP20O75691 2785 aaKnown RBP9.35□□□□□ -0.91
VPS52-218ENST00000482399 RNASE1P07998 156 aaKnown RBP9.34□□□□□ -0.91
VPS52-218ENST00000482399 NSUN5P1Q3KNT7 163 aa9.34□□□□□ -0.91
VPS52-218ENST00000482399 C18orf65Q6ZTR6 163 aa9.34□□□□□ -0.91
VPS52-218ENST00000482399 K7EQG2 157 aa9.34□□□□□ -0.91
VPS52-218ENST00000482399 UBE2L6O14933 153 aa9.34□□□□□ -0.91
VPS52-218ENST00000482399 EIF4EBP3O60516 100 aaPredicted RBP9.34□□□□□ -0.91
VPS52-218ENST00000482399 ZNF415Q09FC8 603 aa9.34□□□□□ -0.91
VPS52-218ENST00000482399 C9orf85Q96MD7 179 aa9.34□□□□□ -0.91
VPS52-218ENST00000482399 YAE1D1Q9NRH1 226 aa9.34□□□□□ -0.91
VPS52-218ENST00000482399 TRBV6-5A0A0K0K1A5 114 aa9.33□□□□□ -0.92
VPS52-218ENST00000482399 H7C423 109 aa9.33□□□□□ -0.92
VPS52-218ENST00000482399 GAGE2AQ6NT46 116 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms