RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 SEC11AP67812 179 aa11.35□□□□□ -0.59
RXRA-202ENST00000481739 PCP2Q8IVA1 136 aa11.35□□□□□ -0.59
RXRA-202ENST00000481739 CSNK1G2-AS1Q8NCQ2 148 aa11.35□□□□□ -0.59
RXRA-202ENST00000481739 CST9LQ9H4G1 147 aa11.35□□□□□ -0.59
RXRA-202ENST00000481739 P0DMU3 169 aa11.34□□□□□ -0.59
RXRA-202ENST00000481739 FAM231AP0DMU4 169 aa11.34□□□□□ -0.59
RXRA-202ENST00000481739 FAM231CP0DMU5 169 aa11.34□□□□□ -0.59
RXRA-202ENST00000481739 RRN3P1Q2M238 152 aa11.34□□□□□ -0.59
RXRA-202ENST00000481739 PKD1L1Q8TDX9 2849 aa11.33□□□□□ -0.6
RXRA-202ENST00000481739 ANK2Q01484 3957 aa11.33□□□□□ -0.6
RXRA-202ENST00000481739 IGKV2D-26A0A0A0MRZ7 120 aa11.33□□□□□ -0.6
RXRA-202ENST00000481739 OXLD1Q5BKU9 147 aa11.33□□□□□ -0.6
RXRA-202ENST00000481739 MDFIQ99750 246 aa11.33□□□□□ -0.6
RXRA-202ENST00000481739 HERVK_113P61574 105 aa11.32□□□□□ -0.6
RXRA-202ENST00000481739 OR11H2Q8NH07 326 aa11.32□□□□□ -0.6
RXRA-202ENST00000481739 OVOL2Q9BRP0 275 aa11.32□□□□□ -0.6
RXRA-202ENST00000481739 E9PLD3 99 aa11.32□□□□□ -0.6
RXRA-202ENST00000481739 WIPF1O43516 503 aa11.32□□□□□ -0.6
RXRA-202ENST00000481739 COTL1Q14019 142 aa11.31□□□□□ -0.6
RXRA-202ENST00000481739 Q6ZSN1 163 aa11.31□□□□□ -0.6
RXRA-202ENST00000481739 SPANXA1Q9NS26 97 aa11.31□□□□□ -0.6
RXRA-202ENST00000481739 IGLV4-69A0A075B6H9 119 aa11.3□□□□□ -0.6
RXRA-202ENST00000481739 ZMAT5Q9UDW3 170 aaKnown RBP11.3□□□□□ -0.6
RXRA-202ENST00000481739 NACAE9PAV3 2078 aa11.3□□□□□ -0.6
RXRA-202ENST00000481739 PLAC8L1A1L4L8 177 aa11.3□□□□□ -0.6
RXRA-202ENST00000481739 C11orf86A6NJI1 115 aa11.3□□□□□ -0.6
RXRA-202ENST00000481739 K7EQD1 137 aa11.3□□□□□ -0.6
RXRA-202ENST00000481739 TCTAP57738 103 aa11.3□□□□□ -0.6
RXRA-202ENST00000481739 Q6ZTI0 123 aa11.3□□□□□ -0.6
RXRA-202ENST00000481739 NFE4Q86UQ8 179 aa11.3□□□□□ -0.6
RXRA-202ENST00000481739 NOP10Q9NPE3 64 aaKnown RBP11.3□□□□□ -0.6
RXRA-202ENST00000481739 TRBV7-3A0A075B6L6 115 aa11.29□□□□□ -0.6
RXRA-202ENST00000481739 TRBV25-1A0A075B6N4 114 aa11.29□□□□□ -0.6
RXRA-202ENST00000481739 RPL36AP83881 106 aaKnown RBP11.29□□□□□ -0.6
RXRA-202ENST00000481739 GAGE1Q13065 139 aa11.29□□□□□ -0.6
RXRA-202ENST00000481739 ORAOV1Q8WV07 137 aa11.29□□□□□ -0.6
RXRA-202ENST00000481739 RPL36ALQ969Q0 106 aaKnown RBP11.29□□□□□ -0.6
RXRA-202ENST00000481739 IGLV4-3A0A075B6K6 122 aa11.28□□□□□ -0.6
RXRA-202ENST00000481739 A6NDN8 102 aa11.28□□□□□ -0.6
RXRA-202ENST00000481739 DAZ4Q86SG3 579 aaKnown RBP11.28□□□□□ -0.6
RXRA-202ENST00000481739 VCX2Q9H322 139 aa11.28□□□□□ -0.6
RXRA-202ENST00000481739 DAZ3Q9NR90 486 aaKnown RBP11.28□□□□□ -0.6
RXRA-202ENST00000481739 COX11Q9Y6N1 276 aa11.28□□□□□ -0.6
RXRA-202ENST00000481739 TRAV8-6A0A0B4J262 113 aa11.28□□□□□ -0.6
RXRA-202ENST00000481739 SMIM9A6NGZ8 99 aa11.28□□□□□ -0.6
RXRA-202ENST00000481739 TAL2Q16559 108 aa11.28□□□□□ -0.6
RXRA-202ENST00000481739 ZNF479Q96JC4 524 aa11.28□□□□□ -0.6
RXRA-202ENST00000481739 CHAC1Q9BUX1 264 aa11.28□□□□□ -0.6
RXRA-202ENST00000481739 ZNF25P17030 456 aaPredicted RBP11.27□□□□□ -0.61
RXRA-202ENST00000481739 DEFB104AQ8WTQ1 72 aa11.27□□□□□ -0.61
RXRA-202ENST00000481739 AMELXQ99217 191 aa11.27□□□□□ -0.61
RXRA-202ENST00000481739 CHCHD7Q9BUK0 85 aa11.27□□□□□ -0.61
RXRA-202ENST00000481739 TRGV2A0A075B6R0 118 aa11.26□□□□□ -0.61
RXRA-202ENST00000481739 MYMXA0A1B0GTQ4 84 aa11.26□□□□□ -0.61
RXRA-202ENST00000481739 SMAGPQ0VAQ4 97 aa11.26□□□□□ -0.61
RXRA-202ENST00000481739 LINC00469Q8N7U9 141 aa11.26□□□□□ -0.61
RXRA-202ENST00000481739 KIR2DL5BQ8NHK3 375 aa11.26□□□□□ -0.61
RXRA-202ENST00000481739 PRADC1Q9BSG0 188 aa11.26□□□□□ -0.61
RXRA-202ENST00000481739 TIMM21Q9BVV7 248 aa11.26□□□□□ -0.61
RXRA-202ENST00000481739 TRBV6-4A0A1B0GX49 114 aa11.25□□□□□ -0.61
RXRA-202ENST00000481739 KRTAP10-11P60412 298 aa11.25□□□□□ -0.61
RXRA-202ENST00000481739 ZNRF2Q8NHG8 242 aa11.25□□□□□ -0.61
RXRA-202ENST00000481739 UBE2D4Q9Y2X8 147 aa11.25□□□□□ -0.61
RXRA-202ENST00000481739 G3V4G9 280 aa11.24□□□□□ -0.61
RXRA-202ENST00000481739 TTTY13Q9BZ97 58 aa11.24□□□□□ -0.61
RXRA-202ENST00000481739 MRPS36P82909 103 aaKnown RBP11.23□□□□□ -0.61
RXRA-202ENST00000481739 TMEM170BQ5T4T1 132 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 SLC25A29Q8N8R3 303 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 Q9UF83 564 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 GAGE12BA1L429 117 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 TAX1BP3O14907 124 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 GAGE7O76087 117 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 GAGE12FP0CL80 117 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 GAGE12GP0CL81 117 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 GAGE12IP0CL82 117 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 APOC4P55056 127 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 UBE2D3P61077 147 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 UBE2D2P62837 147 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 EGFEM1PQ0D2K5 195 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 MAPKAPK5-AS1Q8N8E1 139 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 TM2D2Q9BX73 214 aa11.23□□□□□ -0.61
RXRA-202ENST00000481739 PHLDA1Q8WV24 401 aaPredicted RBP11.22□□□□□ -0.61
RXRA-202ENST00000481739 GTSF1LQ9H1H1 148 aa11.22□□□□□ -0.61
RXRA-202ENST00000481739 LINC00612Q8N6U2 182 aa11.21□□□□□ -0.61
RXRA-202ENST00000481739 OPRPNQ99935 248 aaPredicted RBP11.21□□□□□ -0.61
RXRA-202ENST00000481739 CSDC2Q9Y534 153 aaKnown RBP11.21□□□□□ -0.61
RXRA-202ENST00000481739 ZNF815PA8K554 130 aa11.21□□□□□ -0.62
RXRA-202ENST00000481739 H3BRM9 83 aa11.21□□□□□ -0.62
RXRA-202ENST00000481739 IGHV4-30-4P0DP06 118 aa11.21□□□□□ -0.62
RXRA-202ENST00000481739 EMP1P54849 157 aa11.21□□□□□ -0.62
RXRA-202ENST00000481739 TRGV4A0A0C4DH28 118 aa11.2□□□□□ -0.62
RXRA-202ENST00000481739 IGHV3-38A0A0C4DH36 116 aa11.2□□□□□ -0.62
RXRA-202ENST00000481739 TMEM223A0PJW6 202 aa11.2□□□□□ -0.62
RXRA-202ENST00000481739 CEND1Q8N111 149 aa11.2□□□□□ -0.62
RXRA-202ENST00000481739 ZNF22P17026 224 aaPredicted RBP11.19□□□□□ -0.62
RXRA-202ENST00000481739 SAMD5Q5TGI4 173 aa11.19□□□□□ -0.62
RXRA-202ENST00000481739 FAM104AQ969W3 186 aa11.19□□□□□ -0.62
RXRA-202ENST00000481739 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.19□□□□□ -0.62
RXRA-202ENST00000481739 TINCRA0A1B0GVN0 87 aa11.19□□□□□ -0.62
RXRA-202ENST00000481739 IGKV2-29A2NJV5 120 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms