RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 IGHV3OR16-8A0A075B7F1 116 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 PFDN1O60925 122 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 SPRNQ5BIV9 151 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 C7orf65Q6ZTY9 151 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 SPANXCQ9NY87 97 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 A0A1B0GU33 70 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 A8MWV9 139 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 TPST1O60507 370 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 NDUFB2O95178 105 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 ROMO1P60602 79 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 LINC00483Q53H64 154 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 GTSCR1Q86UQ5 136 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 TEN1Q86WV5 123 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 RNF182Q8N6D2 247 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 OR5D14Q8NGL3 314 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 PPP3R2Q96LZ3 170 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 HIST1H2BLQ99880 126 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 LAMTOR3Q9UHA4 124 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 C11orf86A6NJI1 115 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 A6NN06 94 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 OOSP1A8MZH6 123 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 J3QRE1 110 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 NDUFB3O43676 98 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 TRGC1P0CF51 173 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 TAS2R20P59543 309 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 OR4S1Q8NGB4 309 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 AP1S3Q96PC3 154 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 SMDT1Q9H4I9 107 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 S100A4P26447 101 aaKnown RBP1.92□□□□□ -2.1
SMC6-208ENST00000481708 TCTEX1D1Q8N7M0 179 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 MEIS3P1A6NDR6 274 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 CD3DP04234 171 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 ZCCHC23Q6ZST2 131 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 FP248Q71RG6 208 aaPredicted RBP1.92□□□□□ -2.1
SMC6-208ENST00000481708 C9orf163Q8N9P6 203 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 MND1Q9BWT6 205 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 SLC39A9Q9NUM3 307 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 R4GN34 69 aa1.92□□□□□ -2.1
SMC6-208ENST00000481708 IGKV2D-26A0A0A0MRZ7 120 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 FXYD7P58549 80 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 CDK5R1Q15078 307 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 TMEM136Q6ZRR5 245 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 Q8N814 137 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 S4R3C0 116 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 NINQ8N4C6 2090 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 FXYD1O00168 92 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 GGCTO75223 188 aaKnown RBP1.91□□□□□ -2.1
SMC6-208ENST00000481708 MDKP21741 143 aaPredicted RBP1.91□□□□□ -2.1
SMC6-208ENST00000481708 EIF2B2P49770 351 aaKnown RBP1.91□□□□□ -2.1
SMC6-208ENST00000481708 HSD17B12Q53GQ0 312 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 BPIFB6Q8NFQ5 453 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 MRPS24Q96EL2 167 aaKnown RBP1.91□□□□□ -2.1
SMC6-208ENST00000481708 A0A1B0GW54 56 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 TCRBV3S1A0A5B6 114 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 RER1O15258 196 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 PIN1P1O15428 100 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 HIST1H1DP16402 221 aaKnown RBP1.91□□□□□ -2.1
SMC6-208ENST00000481708 GNG2P59768 71 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 CATR1Q13166 79 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 DEFB121Q5J5C9 76 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 LCN15Q6UWW0 184 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 Q6ZQT0 140 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 A0A0G2JND7 137 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 NDUFA3O95167 84 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 PRB2P02812 416 aaPredicted RBP1.91□□□□□ -2.1
SMC6-208ENST00000481708 IFNA4P05014 189 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 S100A8P05109 93 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 SLC25A4P12235 298 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 MINOS1Q5TGZ0 78 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
SMC6-208ENST00000481708 OR5H6Q8NGV6 325 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 SCGB3A1Q96QR1 104 aa1.91□□□□□ -2.1
SMC6-208ENST00000481708 ZNF471Q9BX82 626 aaPredicted RBP1.91□□□□□ -2.1
SMC6-208ENST00000481708 TRAV3A0A0B4J244 114 aa1.9□□□□□ -2.1
SMC6-208ENST00000481708 IRGMA1A4Y4 181 aa1.9□□□□□ -2.1
SMC6-208ENST00000481708 COLCA2A8K830 154 aa1.9□□□□□ -2.1
SMC6-208ENST00000481708 MT-ND6P03923 174 aa1.9□□□□□ -2.1
SMC6-208ENST00000481708 HLA-DRB4P13762 266 aa1.9□□□□□ -2.1
SMC6-208ENST00000481708 ZNF93P35789 620 aaPredicted RBP1.9□□□□□ -2.1
SMC6-208ENST00000481708 POLR2JP52435 117 aaKnown RBP1.9□□□□□ -2.1
SMC6-208ENST00000481708 OR5A2Q8NGI9 324 aa1.9□□□□□ -2.1
SMC6-208ENST00000481708 VCXQ9H320 206 aa1.9□□□□□ -2.1
SMC6-208ENST00000481708 KLK12Q9UKR0 248 aa1.9□□□□□ -2.1
SMC6-208ENST00000481708 V9GYS6 101 aa1.9□□□□□ -2.1
SMC6-208ENST00000481708 HLA-DRB4X5D2U9 266 aa1.9□□□□□ -2.1
SMC6-208ENST00000481708 LINC00032P0C843 101 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 AKR1C2P52895 323 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 TEX261Q6UWH6 196 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 RPS27LQ71UM5 84 aaKnown RBP1.9□□□□□ -2.11
SMC6-208ENST00000481708 ARPINQ7Z6K5 226 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 DEDD2Q8WXF8 326 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 PRELID3AQ96N28 172 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 H3BUA1 57 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 HIST1H2BKO60814 126 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 NPYP01303 97 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 HIST1H2BJP06899 126 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 PPP3R1P63098 170 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 MIC13Q5XKP0 118 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 ZNF880Q6PDB4 577 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 C20orf166-AS1Q96NR2 134 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms