RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 KRTAP1-3Q8IUG1 177 aa7.89□□□□□ -1.15
VPS52-217ENST00000478934 SPXQ9BT56 116 aa7.89□□□□□ -1.15
VPS52-217ENST00000478934 TRAV2A0A0B4J234 112 aa7.89□□□□□ -1.15
VPS52-217ENST00000478934 IGHV3-38A0A0C4DH36 116 aa7.89□□□□□ -1.15
VPS52-217ENST00000478934 GAGE12HA6NDE8 117 aa7.89□□□□□ -1.15
VPS52-217ENST00000478934 LINC01619G3V211 115 aa7.89□□□□□ -1.15
VPS52-217ENST00000478934 IGHV3-30P01768 117 aa7.89□□□□□ -1.15
VPS52-217ENST00000478934 IGHV3-30-5P0DP03 117 aa7.89□□□□□ -1.15
VPS52-217ENST00000478934 RNF152Q8N8N0 203 aa7.89□□□□□ -1.15
VPS52-217ENST00000478934 WFDC11Q8NEX6 87 aa7.89□□□□□ -1.15
VPS52-217ENST00000478934 TMEM141Q96I45 108 aa7.89□□□□□ -1.15
VPS52-217ENST00000478934 NFE4Q86UQ8 179 aa7.88□□□□□ -1.15
VPS52-217ENST00000478934 C20orf203Q8NBC4 194 aa7.88□□□□□ -1.15
VPS52-217ENST00000478934 FAM104AQ969W3 186 aa7.88□□□□□ -1.15
VPS52-217ENST00000478934 TRAV8-3A0A0A6YYJ7 113 aa7.88□□□□□ -1.15
VPS52-217ENST00000478934 TMEM238LA0A1B0GVL6 79 aa7.88□□□□□ -1.15
VPS52-217ENST00000478934 A6NJY4 79 aa7.88□□□□□ -1.15
VPS52-217ENST00000478934 I3L3M4 83 aa7.88□□□□□ -1.15
VPS52-217ENST00000478934 EIF4EBP3O60516 100 aaPredicted RBP7.88□□□□□ -1.15
VPS52-217ENST00000478934 TCL1BO95988 128 aa7.88□□□□□ -1.15
VPS52-217ENST00000478934 NPC2P61916 151 aa7.88□□□□□ -1.15
VPS52-217ENST00000478934 MAP6D1Q9H9H5 199 aa7.88□□□□□ -1.15
VPS52-217ENST00000478934 IGLV4-3A0A075B6K6 122 aa7.87□□□□□ -1.15
VPS52-217ENST00000478934 TRGV11A0A075B6L2 103 aa7.87□□□□□ -1.15
VPS52-217ENST00000478934 IGHV3OR16-12A0A075B7B8 117 aa7.87□□□□□ -1.15
VPS52-217ENST00000478934 CD28P10747 220 aa7.87□□□□□ -1.15
VPS52-217ENST00000478934 ZNF22P17026 224 aaPredicted RBP7.87□□□□□ -1.15
VPS52-217ENST00000478934 A4D1N5 150 aa7.87□□□□□ -1.15
VPS52-217ENST00000478934 CFAP126Q5VTH2 177 aa7.87□□□□□ -1.15
VPS52-217ENST00000478934 SLC25A29Q8N8R3 303 aa7.87□□□□□ -1.15
VPS52-217ENST00000478934 TMEM223A0PJW6 202 aa7.86□□□□□ -1.15
VPS52-217ENST00000478934 NSUN5P1Q3KNT7 163 aa7.86□□□□□ -1.15
VPS52-217ENST00000478934 LINC01587Q99440 93 aa7.86□□□□□ -1.15
VPS52-217ENST00000478934 VCX2Q9H322 139 aa7.86□□□□□ -1.15
VPS52-217ENST00000478934 XCL2Q9UBD3 114 aa7.86□□□□□ -1.15
VPS52-217ENST00000478934 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.86□□□□□ -1.15
VPS52-217ENST00000478934 IGKV2-29A2NJV5 120 aaPredicted RBP7.86□□□□□ -1.15
VPS52-217ENST00000478934 RHODO00212 210 aa7.86□□□□□ -1.15
VPS52-217ENST00000478934 SCGB1C2P0DMR2 95 aa7.86□□□□□ -1.15
VPS52-217ENST00000478934 PAPPA-AS1Q5QFB9 102 aa7.86□□□□□ -1.15
VPS52-217ENST00000478934 Q6ZSV7 163 aa7.86□□□□□ -1.15
VPS52-217ENST00000478934 DYNLRB2Q8TF09 96 aa7.86□□□□□ -1.15
VPS52-217ENST00000478934 DEFB114Q30KQ6 69 aa7.85□□□□□ -1.15
VPS52-217ENST00000478934 C10orf126Q8N4M7 172 aa7.85□□□□□ -1.15
VPS52-217ENST00000478934 SIGMAR1Q99720 223 aa7.85□□□□□ -1.15
VPS52-217ENST00000478934 PDZD2O15018 2839 aa7.85□□□□□ -1.15
VPS52-217ENST00000478934 FHL3Q13643 280 aa7.85□□□□□ -1.15
VPS52-217ENST00000478934 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
VPS52-217ENST00000478934 Q8N2B8 174 aa7.85□□□□□ -1.15
VPS52-217ENST00000478934 ESM1Q9NQ30 184 aa7.85□□□□□ -1.15
VPS52-217ENST00000478934 UBE2D3P61077 147 aa7.84□□□□□ -1.15
VPS52-217ENST00000478934 UBE2D2P62837 147 aa7.84□□□□□ -1.15
VPS52-217ENST00000478934 RHOHQ15669 191 aa7.84□□□□□ -1.15
VPS52-217ENST00000478934 C4orf3Q8WVX3 66 aa7.84□□□□□ -1.15
VPS52-217ENST00000478934 FOXI1Q12951 378 aa7.83□□□□□ -1.16
VPS52-217ENST00000478934 C11orf72Q8NBR9 251 aa7.83□□□□□ -1.16
VPS52-217ENST00000478934 TNFRSF18Q9Y5U5 241 aa7.83□□□□□ -1.16
VPS52-217ENST00000478934 M0R2P5 195 aa7.83□□□□□ -1.16
VPS52-217ENST00000478934 PRSS2P07478 247 aa7.83□□□□□ -1.16
VPS52-217ENST00000478934 ODF3L2Q3SX64 289 aa7.83□□□□□ -1.16
VPS52-217ENST00000478934 PEMTQ9UBM1 199 aa7.83□□□□□ -1.16
VPS52-217ENST00000478934 PRO1854Q9UHT4 67 aa7.83□□□□□ -1.16
VPS52-217ENST00000478934 HELZ2Q9BYK8 2649 aaKnown RBP7.83□□□□□ -1.16
VPS52-217ENST00000478934 DNAJC9-AS1A6NH13 148 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 J3QR89 54 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 LEPROTO15243 131 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 SPINK8P0C7L1 97 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 IGHV3-30-3P0DP02 117 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 C1QTNF4Q9BXJ3 329 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 ANK3Q12955 4377 aaKnown RBP7.82□□□□□ -1.16
VPS52-217ENST00000478934 DAND5Q8N907 189 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 CARD19Q96LW7 228 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 LINC00467Q9BRT7 94 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 IGHV3-53P01767 116 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 Q1RN00 199 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 ADAMTSL4-AS1Q5T5F5 129 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 CHCHD7Q9BUK0 85 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 WFDC10AQ9H1F0 79 aa7.82□□□□□ -1.16
VPS52-217ENST00000478934 NBEAL2Q6ZNJ1 2754 aa7.81□□□□□ -1.16
VPS52-217ENST00000478934 A0A0J9YXY3 114 aa7.81□□□□□ -1.16
VPS52-217ENST00000478934 A8MTW9 85 aa7.81□□□□□ -1.16
VPS52-217ENST00000478934 TIMM21Q9BVV7 248 aa7.81□□□□□ -1.16
VPS52-217ENST00000478934 ZNF415Q09FC8 603 aa7.81□□□□□ -1.16
VPS52-217ENST00000478934 Q6ZUT4 128 aa7.81□□□□□ -1.16
VPS52-217ENST00000478934 SPATA25Q9BR10 227 aa7.81□□□□□ -1.16
VPS52-217ENST00000478934 A8MWV9 139 aa7.8□□□□□ -1.16
VPS52-217ENST00000478934 NDUFA7O95182 113 aa7.8□□□□□ -1.16
VPS52-217ENST00000478934 PLA2G2AP14555 144 aa7.8□□□□□ -1.16
VPS52-217ENST00000478934 C1orf158Q8N1D5 194 aa7.8□□□□□ -1.16
VPS52-217ENST00000478934 CITED2Q99967 270 aaPredicted RBP7.8□□□□□ -1.16
VPS52-217ENST00000478934 A0A0U1RRA0 63 aa7.8□□□□□ -1.16
VPS52-217ENST00000478934 C9JAW5 83 aa7.8□□□□□ -1.16
VPS52-217ENST00000478934 IGHV3-33P01772 117 aa7.8□□□□□ -1.16
VPS52-217ENST00000478934 ANKRD29Q8N6D5 301 aa7.8□□□□□ -1.16
VPS52-217ENST00000478934 TMEM263Q8WUH6 116 aaKnown RBP7.8□□□□□ -1.16
VPS52-217ENST00000478934 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
VPS52-217ENST00000478934 UBE2D4Q9Y2X8 147 aa7.79□□□□□ -1.16
VPS52-217ENST00000478934 NOTCH2Q04721 2471 aa7.79□□□□□ -1.16
VPS52-217ENST00000478934 INSP01308 110 aa7.79□□□□□ -1.16
VPS52-217ENST00000478934 MT-ATP8P03928 68 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms