RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 C2orf82Q6UX34 121 aa13.41□□□□□ -0.26
PDE8A-204ENST00000478717 KLLNB2CW77 178 aa13.41□□□□□ -0.26
PDE8A-204ENST00000478717 SYNJ2BPP57105 145 aa13.41□□□□□ -0.26
PDE8A-204ENST00000478717 NPC2P61916 151 aa13.4□□□□□ -0.26
PDE8A-204ENST00000478717 ZNF469Q96JG9 3925 aaPredicted RBP13.4□□□□□ -0.26
PDE8A-204ENST00000478717 BBC3Q96PG8 261 aaPredicted RBP13.4□□□□□ -0.27
PDE8A-204ENST00000478717 MDFICQ9P1T7 246 aa13.39□□□□□ -0.27
PDE8A-204ENST00000478717 A0A087WWL8 130 aa13.39□□□□□ -0.27
PDE8A-204ENST00000478717 TRBV10-2A0A0K0K1G8 114 aa13.39□□□□□ -0.27
PDE8A-204ENST00000478717 ZNF22P17026 224 aaPredicted RBP13.39□□□□□ -0.27
PDE8A-204ENST00000478717 CLEC2BQ92478 149 aa13.39□□□□□ -0.27
PDE8A-204ENST00000478717 NAV2Q8IVL1 2488 aa13.38□□□□□ -0.27
PDE8A-204ENST00000478717 H7C423 109 aa13.38□□□□□ -0.27
PDE8A-204ENST00000478717 M0QXV9 152 aa13.38□□□□□ -0.27
PDE8A-204ENST00000478717 KRTAP10-9P60411 292 aa13.38□□□□□ -0.27
PDE8A-204ENST00000478717 PRSS2P07478 247 aa13.38□□□□□ -0.27
PDE8A-204ENST00000478717 P0DMU3 169 aa13.38□□□□□ -0.27
PDE8A-204ENST00000478717 FAM231AP0DMU4 169 aa13.38□□□□□ -0.27
PDE8A-204ENST00000478717 FAM231CP0DMU5 169 aa13.38□□□□□ -0.27
PDE8A-204ENST00000478717 LINC01587Q99440 93 aa13.37□□□□□ -0.27
PDE8A-204ENST00000478717 RPL13AP40429 203 aaKnown RBP13.37□□□□□ -0.27
PDE8A-204ENST00000478717 LINC00315P59091 139 aa13.37□□□□□ -0.27
PDE8A-204ENST00000478717 CEMP1Q6PRD7 247 aaPredicted RBP13.37□□□□□ -0.27
PDE8A-204ENST00000478717 ZNF256Q9Y2P7 627 aaPredicted RBP13.37□□□□□ -0.27
PDE8A-204ENST00000478717 F5H697 171 aa13.36□□□□□ -0.27
PDE8A-204ENST00000478717 MED14OSP0DP75 135 aa13.36□□□□□ -0.27
PDE8A-204ENST00000478717 YAE1D1Q9NRH1 226 aa13.36□□□□□ -0.27
PDE8A-204ENST00000478717 KIF25-AS1Q9Y6Z4 181 aa13.36□□□□□ -0.27
PDE8A-204ENST00000478717 IGHV4OR15-8A0A075B7B6 117 aa13.36□□□□□ -0.27
PDE8A-204ENST00000478717 A0A087WW49 117 aa13.36□□□□□ -0.27
PDE8A-204ENST00000478717 LOC107984640A0A0U1RRK4 108 aa13.36□□□□□ -0.27
PDE8A-204ENST00000478717 PAPPA-AS1Q5QFB9 102 aa13.36□□□□□ -0.27
PDE8A-204ENST00000478717 TLN2Q9Y4G6 2542 aa13.36□□□□□ -0.27
PDE8A-204ENST00000478717 ZNF876PQ49A33 203 aa13.35□□□□□ -0.27
PDE8A-204ENST00000478717 A0A0B4J2C4 111 aa13.35□□□□□ -0.27
PDE8A-204ENST00000478717 LINC00694P0DN24 101 aa13.34□□□□□ -0.27
PDE8A-204ENST00000478717 SPINK13Q1W4C9 94 aa13.34□□□□□ -0.27
PDE8A-204ENST00000478717 FAM74A4Q5TZK3 123 aa13.34□□□□□ -0.27
PDE8A-204ENST00000478717 MYO9AB2RTY4 2548 aa13.34□□□□□ -0.27
PDE8A-204ENST00000478717 SNRPD3P62318 126 aaKnown RBP13.33□□□□□ -0.27
PDE8A-204ENST00000478717 TRGV11A0A075B6L2 103 aa13.33□□□□□ -0.28
PDE8A-204ENST00000478717 A0A0J9YX75 114 aa13.33□□□□□ -0.28
PDE8A-204ENST00000478717 FAM236AA0A1B0GUQ0 79 aa13.33□□□□□ -0.28
PDE8A-204ENST00000478717 FAM236BA0A1B0GV22 79 aa13.33□□□□□ -0.28
PDE8A-204ENST00000478717 C18orf65Q6ZTR6 163 aa13.33□□□□□ -0.28
PDE8A-204ENST00000478717 HOXD3P31249 432 aaPredicted RBP13.33□□□□□ -0.28
PDE8A-204ENST00000478717 DEFB136Q30KP8 78 aa13.33□□□□□ -0.28
PDE8A-204ENST00000478717 HIST2H2BDQ6DRA6 164 aa13.33□□□□□ -0.28
PDE8A-204ENST00000478717 SUMO4Q6EEV6 95 aa13.33□□□□□ -0.28
PDE8A-204ENST00000478717 SDHAF1A6NFY7 115 aa13.32□□□□□ -0.28
PDE8A-204ENST00000478717 K7EQG2 157 aa13.32□□□□□ -0.28
PDE8A-204ENST00000478717 NXPH4O95158 308 aa13.32□□□□□ -0.28
PDE8A-204ENST00000478717 ZNF702PQ9H963 129 aa13.32□□□□□ -0.28
PDE8A-204ENST00000478717 KLK5Q9Y337 293 aaPredicted RBP13.32□□□□□ -0.28
PDE8A-204ENST00000478717 A0A0J9YXV3 536 aa13.32□□□□□ -0.28
PDE8A-204ENST00000478717 J3QLI3 93 aa13.32□□□□□ -0.28
PDE8A-204ENST00000478717 Q6YL49 198 aa13.32□□□□□ -0.28
PDE8A-204ENST00000478717 TMEM223A0PJW6 202 aa13.31□□□□□ -0.28
PDE8A-204ENST00000478717 POLR2KP53803 58 aaKnown RBP13.31□□□□□ -0.28
PDE8A-204ENST00000478717 UBR5O95071 2799 aaPredicted RBP13.31□□□□□ -0.28
PDE8A-204ENST00000478717 NBPF19A0A087WUL8 3843 aa13.31□□□□□ -0.28
PDE8A-204ENST00000478717 IGHV4-31P0DP07 118 aa13.31□□□□□ -0.28
PDE8A-204ENST00000478717 SPXQ9BT56 116 aa13.31□□□□□ -0.28
PDE8A-204ENST00000478717 LEPROTO15243 131 aa13.3□□□□□ -0.28
PDE8A-204ENST00000478717 MRPL23Q16540 153 aaKnown RBP13.3□□□□□ -0.28
PDE8A-204ENST00000478717 ADAMTSL4-AS1Q5T5F5 129 aa13.3□□□□□ -0.28
PDE8A-204ENST00000478717 ICOSQ9Y6W8 199 aa13.3□□□□□ -0.28
PDE8A-204ENST00000478717 IGHV3-16A0A0C4DH30 117 aa13.3□□□□□ -0.28
PDE8A-204ENST00000478717 A0A0J9YXY3 114 aa13.3□□□□□ -0.28
PDE8A-204ENST00000478717 TRBV30A0A0K0K1B3 111 aa13.3□□□□□ -0.28
PDE8A-204ENST00000478717 POM121L12Q8N7R1 296 aa13.3□□□□□ -0.28
PDE8A-204ENST00000478717 PRRC2AP48634 2157 aaKnown RBP13.3□□□□□ -0.28
PDE8A-204ENST00000478717 A8MZ25 164 aa13.29□□□□□ -0.28
PDE8A-204ENST00000478717 TMEM141Q96I45 108 aa13.29□□□□□ -0.28
PDE8A-204ENST00000478717 EPG5Q9HCE0 2579 aa13.29□□□□□ -0.28
PDE8A-204ENST00000478717 TRAV8-3A0A0A6YYJ7 113 aa13.29□□□□□ -0.28
PDE8A-204ENST00000478717 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.29□□□□□ -0.28
PDE8A-204ENST00000478717 HTN1P15515 57 aa13.29□□□□□ -0.28
PDE8A-204ENST00000478717 SONP18583 2426 aaKnown RBP13.28□□□□□ -0.28
PDE8A-204ENST00000478717 TMEM89A2RUT3 159 aa13.28□□□□□ -0.28
PDE8A-204ENST00000478717 VCYO14598 125 aa13.28□□□□□ -0.28
PDE8A-204ENST00000478717 PPP1R17O96001 155 aa13.28□□□□□ -0.28
PDE8A-204ENST00000478717 TIMM17AQ99595 171 aa13.28□□□□□ -0.28
PDE8A-204ENST00000478717 M0R2P5 195 aa13.28□□□□□ -0.28
PDE8A-204ENST00000478717 SLURP1P55000 103 aa13.28□□□□□ -0.28
PDE8A-204ENST00000478717 UBE2E2Q96LR5 201 aa13.27□□□□□ -0.28
PDE8A-204ENST00000478717 PRM2P04554 102 aa13.26□□□□□ -0.29
PDE8A-204ENST00000478717 C9orf85Q96MD7 179 aa13.26□□□□□ -0.29
PDE8A-204ENST00000478717 CR1P17927 2039 aa13.26□□□□□ -0.29
PDE8A-204ENST00000478717 FSHBP01225 129 aa13.26□□□□□ -0.29
PDE8A-204ENST00000478717 RNASE13Q5GAN3 156 aaKnown RBP13.26□□□□□ -0.29
PDE8A-204ENST00000478717 ZNF843Q8N446 348 aa13.26□□□□□ -0.29
PDE8A-204ENST00000478717 TMEM126AQ9H061 195 aa13.26□□□□□ -0.29
PDE8A-204ENST00000478717 IGHV1OR15-1A0A075B7D0 117 aa13.26□□□□□ -0.29
PDE8A-204ENST00000478717 KNCNA6PVL3 124 aa13.26□□□□□ -0.29
PDE8A-204ENST00000478717 C9orf153Q5TBE3 101 aa13.26□□□□□ -0.29
PDE8A-204ENST00000478717 DAND5Q8N907 189 aa13.26□□□□□ -0.29
PDE8A-204ENST00000478717 NF1P21359 2839 aa13.25□□□□□ -0.29
PDE8A-204ENST00000478717 APCP25054 2843 aa13.25□□□□□ -0.29
PDE8A-204ENST00000478717 IGHV3-30-3P0DP02 117 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms