RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 PSMB2P49721 201 aa4.58□□□□□ -1.68
SH3D19-207ENST00000478503 TMEM191AQ9H0A3 160 aa4.58□□□□□ -1.68
SH3D19-207ENST00000478503 SCGB1D4Q6XE38 83 aa4.57□□□□□ -1.68
SH3D19-207ENST00000478503 CHCHD1Q96BP2 118 aaKnown RBP4.57□□□□□ -1.68
SH3D19-207ENST00000478503 CHCHD5Q9BSY4 110 aa4.57□□□□□ -1.68
SH3D19-207ENST00000478503 ZNF747Q9BV97 191 aa4.57□□□□□ -1.68
SH3D19-207ENST00000478503 DKK2Q9UBU2 259 aa4.57□□□□□ -1.68
SH3D19-207ENST00000478503 IGHV4-59P01825 116 aa4.57□□□□□ -1.68
SH3D19-207ENST00000478503 NMUP48645 174 aa4.57□□□□□ -1.68
SH3D19-207ENST00000478503 WFDC2Q14508 124 aa4.57□□□□□ -1.68
SH3D19-207ENST00000478503 GAGE13Q4V321 117 aa4.57□□□□□ -1.68
SH3D19-207ENST00000478503 SPANXN1Q5VSR9 72 aa4.57□□□□□ -1.68
SH3D19-207ENST00000478503 HTN1P15515 57 aa4.57□□□□□ -1.68
SH3D19-207ENST00000478503 RNASE4P34096 147 aaKnown RBP4.57□□□□□ -1.68
SH3D19-207ENST00000478503 TRAV8-3A0A0A6YYJ7 113 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 C9orf118A6NHY6 69 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 F8W1H4 67 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 MORN3Q6PF18 240 aaPredicted RBP4.56□□□□□ -1.68
SH3D19-207ENST00000478503 Q6Q795 121 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 PHLDA1Q8WV24 401 aaPredicted RBP4.56□□□□□ -1.68
SH3D19-207ENST00000478503 DLX4Q92988 240 aaPredicted RBP4.56□□□□□ -1.68
SH3D19-207ENST00000478503 UQCRQO14949 82 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 GNRH2O43555 120 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 PRSS1P07477 247 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 S100A4P26447 101 aaKnown RBP4.56□□□□□ -1.68
SH3D19-207ENST00000478503 SNRPD3P62318 126 aaKnown RBP4.56□□□□□ -1.68
SH3D19-207ENST00000478503 ORMDL2Q53FV1 153 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 C3orf22Q8N5N4 141 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 A0A087WZ39 114 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 LOC107984156A0A0G2JMH3 177 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 RBM3P98179 157 aaKnown RBP4.56□□□□□ -1.68
SH3D19-207ENST00000478503 FOXI2Q6ZQN5 318 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 PRIMA1Q86XR5 153 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 ARL17AQ8IVW1 177 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 PSMG3-AS1Q96PY0 264 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 MSMBP08118 114 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 MGPP08493 103 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 PCP2Q8IVA1 136 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 C14orf178Q8N769 122 aaPredicted RBP4.56□□□□□ -1.68
SH3D19-207ENST00000478503 RNF185Q96GF1 192 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 OVOL2Q9BRP0 275 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 LAMTOR3Q9UHA4 124 aa4.56□□□□□ -1.68
SH3D19-207ENST00000478503 NBEAL2Q6ZNJ1 2754 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 KRTAP10-9P60411 292 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 RHPN1-AS1Q9BWJ2 59 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 TENM4Q6N022 2769 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 TRAV12-2A0A075B6T6 113 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 TRBV7-1A0A0A6YYK4 115 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 SEC11AP67812 179 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 DEFB112Q30KQ8 113 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 BVES-AS1Q5T3Y7 98 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 DPH3Q96FX2 82 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 BBC3Q96PG8 261 aaPredicted RBP4.55□□□□□ -1.68
SH3D19-207ENST00000478503 ZNF688P0C7X2 276 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 GPHB5Q86YW7 130 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 TMEM158Q8WZ71 300 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 IFI27L1Q96BM0 104 aa4.55□□□□□ -1.68
SH3D19-207ENST00000478503 HBDP02042 147 aa4.54□□□□□ -1.68
SH3D19-207ENST00000478503 PRM2P04554 102 aa4.54□□□□□ -1.68
SH3D19-207ENST00000478503 TMEM258P61165 79 aa4.54□□□□□ -1.68
SH3D19-207ENST00000478503 NPC2P61916 151 aa4.54□□□□□ -1.68
SH3D19-207ENST00000478503 DEFB136Q30KP8 78 aa4.54□□□□□ -1.68
SH3D19-207ENST00000478503 BEAN1Q3B7T3 259 aa4.54□□□□□ -1.68
SH3D19-207ENST00000478503 TRBV6-1A0A0K0K1D8 114 aa4.54□□□□□ -1.68
SH3D19-207ENST00000478503 SCGB1C2P0DMR2 95 aa4.54□□□□□ -1.68
SH3D19-207ENST00000478503 RPL39LQ96EH5 51 aaKnown RBP4.54□□□□□ -1.68
SH3D19-207ENST00000478503 LINC01545Q5VT33 79 aa4.54□□□□□ -1.68
SH3D19-207ENST00000478503 COPS9Q8WXC6 57 aa4.54□□□□□ -1.68
SH3D19-207ENST00000478503 SLC50A1Q9BRV3 221 aa4.54□□□□□ -1.68
SH3D19-207ENST00000478503 UBR5O95071 2799 aaPredicted RBP4.54□□□□□ -1.68
SH3D19-207ENST00000478503 GCN1Q92616 2671 aaKnown RBP4.53□□□□□ -1.68
SH3D19-207ENST00000478503 A0A1W2PPM0 123 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 RBAKDNA6NC62 111 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 FAM74A4Q5TZK3 123 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 SCRT2Q9NQ03 307 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 TRAV12-3A0A0B4J271 114 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 Q5XG85 94 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 UFSP1Q6NVU6 142 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 IGKV2D-26A0A0A0MRZ7 120 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 IGHV7-4-1A0A0J9YVY3 117 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 hADV29S1A0JD25 119 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 SYNJ2BPP57105 145 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 CFHR3Q02985 330 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 PHLDA3Q9Y5J5 127 aa4.53□□□□□ -1.68
SH3D19-207ENST00000478503 H3BRM9 83 aa4.52□□□□□ -1.69
SH3D19-207ENST00000478503 DUSP14O95147 198 aaKnown RBP4.52□□□□□ -1.69
SH3D19-207ENST00000478503 FOXI1Q12951 378 aa4.52□□□□□ -1.69
SH3D19-207ENST00000478503 PSMG4Q5JS54 123 aa4.52□□□□□ -1.69
SH3D19-207ENST00000478503 ZC2HC1BQ5TFG8 222 aa4.52□□□□□ -1.69
SH3D19-207ENST00000478503 C18orf65Q6ZTR6 163 aa4.52□□□□□ -1.69
SH3D19-207ENST00000478503 KLK9Q9UKQ9 250 aa4.52□□□□□ -1.69
SH3D19-207ENST00000478503 A6NDX4 124 aa4.52□□□□□ -1.69
SH3D19-207ENST00000478503 B4DSR2 109 aa4.52□□□□□ -1.69
SH3D19-207ENST00000478503 IGHG2P01859 326 aa4.52□□□□□ -1.69
SH3D19-207ENST00000478503 CIRBPQ14011 172 aaKnown RBP4.52□□□□□ -1.69
SH3D19-207ENST00000478503 ZFAND2AQ8N6M9 145 aa4.52□□□□□ -1.69
SH3D19-207ENST00000478503 TMEM256-PLSCR3K7ERE1 68 aa4.51□□□□□ -1.69
SH3D19-207ENST00000478503 EIF4EBP3O60516 100 aaPredicted RBP4.51□□□□□ -1.69
SH3D19-207ENST00000478503 C2orf91Q6ZV80 131 aa4.51□□□□□ -1.69
SH3D19-207ENST00000478503 NXT2Q9NPJ8 142 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms