RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 DGAT2L7PQ6IED9 249 aa7□□□□□ -1.29
SEC13-214ENST00000476597 CLPSL2Q6UWE3 100 aa7□□□□□ -1.29
SEC13-214ENST00000476597 GATD1Q8NB37 220 aa7□□□□□ -1.29
SEC13-214ENST00000476597 CIRBP-AS1Q8TBR5 109 aa7□□□□□ -1.29
SEC13-214ENST00000476597 TMEM243Q9BU79 118 aa7□□□□□ -1.29
SEC13-214ENST00000476597 hCG_2014768A0A024R1R8 64 aa6.99□□□□□ -1.29
SEC13-214ENST00000476597 IGLV4-60A0A075B6I1 120 aa6.99□□□□□ -1.29
SEC13-214ENST00000476597 TRAV8-4A0A0B4J246 113 aa6.99□□□□□ -1.29
SEC13-214ENST00000476597 GATCO43716 136 aaKnown RBP6.99□□□□□ -1.29
SEC13-214ENST00000476597 FOXA3P55318 350 aaPredicted RBP6.99□□□□□ -1.29
SEC13-214ENST00000476597 COTL1Q14019 142 aa6.99□□□□□ -1.29
SEC13-214ENST00000476597 FAM231DQ6ZW35 169 aa6.99□□□□□ -1.29
SEC13-214ENST00000476597 DEFB104AQ8WTQ1 72 aa6.99□□□□□ -1.29
SEC13-214ENST00000476597 IGLV10-54A0A075B6I4 117 aa6.98□□□□□ -1.29
SEC13-214ENST00000476597 A8MWL6 223 aa6.98□□□□□ -1.29
SEC13-214ENST00000476597 C9orf163Q8N9P6 203 aa6.98□□□□□ -1.29
SEC13-214ENST00000476597 CLRN3Q8NCR9 226 aa6.98□□□□□ -1.29
SEC13-214ENST00000476597 GFRA4Q9GZZ7 299 aa6.98□□□□□ -1.29
SEC13-214ENST00000476597 TRAV26-2A0A0B4J265 109 aa6.97□□□□□ -1.29
SEC13-214ENST00000476597 UBE2L6O14933 153 aa6.97□□□□□ -1.29
SEC13-214ENST00000476597 NDUFS6O75380 124 aaKnown RBP6.97□□□□□ -1.29
SEC13-214ENST00000476597 AMTP48728 403 aa6.97□□□□□ -1.29
SEC13-214ENST00000476597 KRTAP10-4P60372 401 aaPredicted RBP6.97□□□□□ -1.29
SEC13-214ENST00000476597 SMIM15Q7Z3B0 74 aa6.97□□□□□ -1.29
SEC13-214ENST00000476597 CT83Q5H943 113 aa6.96□□□□□ -1.3
SEC13-214ENST00000476597 TEX261Q6UWH6 196 aa6.96□□□□□ -1.3
SEC13-214ENST00000476597 SDIM1Q6ZPB5 146 aa6.96□□□□□ -1.3
SEC13-214ENST00000476597 RPL39LQ96EH5 51 aaKnown RBP6.96□□□□□ -1.3
SEC13-214ENST00000476597 NCR2O95944 276 aa6.95□□□□□ -1.3
SEC13-214ENST00000476597 CEBPGP53567 150 aa6.95□□□□□ -1.3
SEC13-214ENST00000476597 CNBPP62633 177 aaKnown RBP6.95□□□□□ -1.3
SEC13-214ENST00000476597 FAM210AQ96ND0 272 aa6.95□□□□□ -1.3
SEC13-214ENST00000476597 EIF5A2Q9GZV4 153 aaKnown RBP6.95□□□□□ -1.3
SEC13-214ENST00000476597 TRBV6-5A0A0K0K1A5 114 aa6.94□□□□□ -1.3
SEC13-214ENST00000476597 SDHAF1A6NFY7 115 aa6.94□□□□□ -1.3
SEC13-214ENST00000476597 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
SEC13-214ENST00000476597 H7C423 109 aa6.94□□□□□ -1.3
SEC13-214ENST00000476597 LINC01551Q86U37 167 aa6.94□□□□□ -1.3
SEC13-214ENST00000476597 TSKUQ8WUA8 353 aa6.94□□□□□ -1.3
SEC13-214ENST00000476597 SMIM7Q9BQ49 75 aa6.94□□□□□ -1.3
SEC13-214ENST00000476597 hDV102S1A0JD36 115 aa6.93□□□□□ -1.3
SEC13-214ENST00000476597 FAM231BA6NCW3 169 aa6.93□□□□□ -1.3
SEC13-214ENST00000476597 J3QL48 77 aa6.93□□□□□ -1.3
SEC13-214ENST00000476597 SLPIP03973 132 aa6.93□□□□□ -1.3
SEC13-214ENST00000476597 SRP19P09132 144 aaKnown RBP6.93□□□□□ -1.3
SEC13-214ENST00000476597 TMEM191AQ9H0A3 160 aa6.93□□□□□ -1.3
SEC13-214ENST00000476597 OSTCQ9NRP0 149 aa6.93□□□□□ -1.3
SEC13-214ENST00000476597 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.93□□□□□ -1.3
SEC13-214ENST00000476597 PKHD1L1Q86WI1 4243 aa6.93□□□□□ -1.3
SEC13-214ENST00000476597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.92□□□□□ -1.3
SEC13-214ENST00000476597 A0A1B0GUT8 65 aa6.92□□□□□ -1.3
SEC13-214ENST00000476597 IGKV2-29A2NJV5 120 aaPredicted RBP6.92□□□□□ -1.3
SEC13-214ENST00000476597 ZNF727A8MUV8 499 aa6.92□□□□□ -1.3
SEC13-214ENST00000476597 HIGD1CA8MV81 97 aa6.92□□□□□ -1.3
SEC13-214ENST00000476597 PANO1I0J062 215 aa6.92□□□□□ -1.3
SEC13-214ENST00000476597 I3L3M4 83 aa6.92□□□□□ -1.3
SEC13-214ENST00000476597 GAS8-AS1O95177 125 aa6.92□□□□□ -1.3
SEC13-214ENST00000476597 APCSP02743 223 aa6.92□□□□□ -1.3
SEC13-214ENST00000476597 PMCHP20382 165 aa6.92□□□□□ -1.3
SEC13-214ENST00000476597 AMMECR1LQ6DCA0 310 aa6.92□□□□□ -1.3
SEC13-214ENST00000476597 BORCS7Q96B45 105 aa6.92□□□□□ -1.3
SEC13-214ENST00000476597 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
SEC13-214ENST00000476597 A0A1B0GVG6 124 aa6.91□□□□□ -1.3
SEC13-214ENST00000476597 GAGE12HA6NDE8 117 aa6.91□□□□□ -1.3
SEC13-214ENST00000476597 FGF6P10767 208 aa6.91□□□□□ -1.3
SEC13-214ENST00000476597 ESDP10768 282 aa6.91□□□□□ -1.3
SEC13-214ENST00000476597 RAB4AP20338 218 aa6.91□□□□□ -1.3
SEC13-214ENST00000476597 POLR2KP53803 58 aaKnown RBP6.91□□□□□ -1.3
SEC13-214ENST00000476597 CIRBPQ14011 172 aaKnown RBP6.91□□□□□ -1.3
SEC13-214ENST00000476597 RNASEKQ6P5S7 137 aaKnown RBP6.91□□□□□ -1.3
SEC13-214ENST00000476597 CFAP161Q6P656 301 aa6.91□□□□□ -1.3
SEC13-214ENST00000476597 RNF185Q96GF1 192 aa6.91□□□□□ -1.3
SEC13-214ENST00000476597 HMCN2Q8NDA2 5059 aa6.91□□□□□ -1.3
SEC13-214ENST00000476597 IGHV3-64A0A075B6Q5 118 aa6.9□□□□□ -1.3
SEC13-214ENST00000476597 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.9□□□□□ -1.3
SEC13-214ENST00000476597 IGKV3OR2-268A0A0C4DH90 116 aa6.9□□□□□ -1.3
SEC13-214ENST00000476597 C15orf56Q8N910 161 aa6.9□□□□□ -1.3
SEC13-214ENST00000476597 CHCHD10Q8WYQ3 142 aaPredicted RBP6.9□□□□□ -1.3
SEC13-214ENST00000476597 ST20Q9HBF5 79 aa6.9□□□□□ -1.3
SEC13-214ENST00000476597 V9GYV3 84 aa6.9□□□□□ -1.3
SEC13-214ENST00000476597 TSHBP01222 138 aa6.89□□□□□ -1.31
SEC13-214ENST00000476597 ZNF25P17030 456 aaPredicted RBP6.89□□□□□ -1.31
SEC13-214ENST00000476597 RPS10P46783 165 aaKnown RBP6.89□□□□□ -1.31
SEC13-214ENST00000476597 RPL37AP61513 92 aaKnown RBP6.89□□□□□ -1.31
SEC13-214ENST00000476597 TMEM241Q24JQ0 296 aa6.89□□□□□ -1.31
SEC13-214ENST00000476597 NUP35Q8NFH5 326 aa6.89□□□□□ -1.31
SEC13-214ENST00000476597 OR5A1Q8NGJ0 315 aa6.89□□□□□ -1.31
SEC13-214ENST00000476597 MRAP2Q96G30 205 aa6.89□□□□□ -1.31
SEC13-214ENST00000476597 TRBV27A0A0K0K1C4 114 aa6.88□□□□□ -1.31
SEC13-214ENST00000476597 C9JQL5 133 aa6.88□□□□□ -1.31
SEC13-214ENST00000476597 OXTP01178 125 aa6.88□□□□□ -1.31
SEC13-214ENST00000476597 RPL23P62829 140 aaKnown RBP6.88□□□□□ -1.31
SEC13-214ENST00000476597 RIGQ13278 110 aa6.88□□□□□ -1.31
SEC13-214ENST00000476597 FAM74A3Q4VXF1 159 aa6.88□□□□□ -1.31
SEC13-214ENST00000476597 AMN1Q8IY45 258 aa6.88□□□□□ -1.31
SEC13-214ENST00000476597 ISOC2Q96AB3 205 aa6.88□□□□□ -1.31
SEC13-214ENST00000476597 TMEM101Q96IK0 257 aa6.88□□□□□ -1.31
SEC13-214ENST00000476597 BTF3L4Q96K17 158 aa6.88□□□□□ -1.31
SEC13-214ENST00000476597 TMEM242Q9NWH2 141 aa6.88□□□□□ -1.31
SEC13-214ENST00000476597 LINC00959A0A1B0GUT2 108 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms