RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 FAM223AQ8IWN6 122 aa3.42□□□□□ -1.86
U2SURP-208ENST00000473835 DUX5Q96PT3 197 aa3.42□□□□□ -1.86
U2SURP-208ENST00000473835 UBE2D4Q9Y2X8 147 aa3.42□□□□□ -1.86
U2SURP-208ENST00000473835 COX7CP15954 63 aa3.42□□□□□ -1.86
U2SURP-208ENST00000473835 RNASE13Q5GAN3 156 aaKnown RBP3.42□□□□□ -1.86
U2SURP-208ENST00000473835 PEMTQ9UBM1 199 aa3.42□□□□□ -1.86
U2SURP-208ENST00000473835 CEP250Q9BV73 2442 aa3.42□□□□□ -1.86
U2SURP-208ENST00000473835 RBMY1A1P0DJD3 496 aaKnown RBP3.42□□□□□ -1.86
U2SURP-208ENST00000473835 RBMY1CP0DJD4 496 aa3.42□□□□□ -1.86
U2SURP-208ENST00000473835 RBMY1FQ15415 496 aaKnown RBP3.42□□□□□ -1.86
U2SURP-208ENST00000473835 C9orf153Q5TBE3 101 aa3.42□□□□□ -1.86
U2SURP-208ENST00000473835 COX7A2LO14548 114 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 SAA4P35542 130 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 TRAV12-3A0A0B4J271 114 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 F5H697 171 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 PROK1P58294 105 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 RPS28P62857 69 aaKnown RBP3.41□□□□□ -1.86
U2SURP-208ENST00000473835 DAZ2Q13117 558 aaKnown RBP3.41□□□□□ -1.86
U2SURP-208ENST00000473835 DAZ4Q86SG3 579 aaKnown RBP3.41□□□□□ -1.86
U2SURP-208ENST00000473835 DAZ1Q9NQZ3 744 aaKnown RBP3.41□□□□□ -1.86
U2SURP-208ENST00000473835 DAZ3Q9NR90 486 aaKnown RBP3.41□□□□□ -1.86
U2SURP-208ENST00000473835 CEP295Q9C0D2 2601 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 TRAV41A0A0B4J266 112 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 NDUFA1O15239 70 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 TIRAPP58753 221 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 C5orf47Q569G3 176 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 Q6ZSN1 163 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 RNF152Q8N8N0 203 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 LINC00308Q8TCZ7 52 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 URB1O60287 2271 aaKnown RBP3.41□□□□□ -1.86
U2SURP-208ENST00000473835 NBPF19A0A087WUL8 3843 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 IGLV5-39A0A0G2JS06 123 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 ATP5G1P05496 136 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 Q5XG85 94 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 OBSCN-AS1Q96MR7 158 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 KIR2DL5BQ8NHK3 375 aa3.41□□□□□ -1.86
U2SURP-208ENST00000473835 J3KT08 172 aa3.4□□□□□ -1.86
U2SURP-208ENST00000473835 PRSS2P07478 247 aa3.4□□□□□ -1.86
U2SURP-208ENST00000473835 RHPN1-AS1Q9BWJ2 59 aa3.4□□□□□ -1.86
U2SURP-208ENST00000473835 PKDREJQ9NTG1 2253 aa3.4□□□□□ -1.86
U2SURP-208ENST00000473835 TRAV12-2A0A075B6T6 113 aa3.4□□□□□ -1.86
U2SURP-208ENST00000473835 COX6A2Q02221 97 aa3.4□□□□□ -1.86
U2SURP-208ENST00000473835 ANKRD11Q6UB99 2663 aaPredicted RBP3.4□□□□□ -1.87
U2SURP-208ENST00000473835 A0A1W2PPR1 153 aa3.4□□□□□ -1.87
U2SURP-208ENST00000473835 COX6CP09669 75 aa3.4□□□□□ -1.87
U2SURP-208ENST00000473835 FAM222AQ5U5X8 452 aa3.4□□□□□ -1.87
U2SURP-208ENST00000473835 TRACP01848 142 aa3.4□□□□□ -1.87
U2SURP-208ENST00000473835 CD28P10747 220 aa3.4□□□□□ -1.87
U2SURP-208ENST00000473835 TMEM219Q86XT9 240 aa3.4□□□□□ -1.87
U2SURP-208ENST00000473835 ROS1P08922 2347 aa3.4□□□□□ -1.87
U2SURP-208ENST00000473835 FAM19A3Q7Z5A8 133 aa3.4□□□□□ -1.87
U2SURP-208ENST00000473835 CDKN2A-AS1Q9UH64 79 aa3.4□□□□□ -1.87
U2SURP-208ENST00000473835 CFHR3Q02985 330 aa3.39□□□□□ -1.87
U2SURP-208ENST00000473835 DPH3Q96FX2 82 aa3.39□□□□□ -1.87
U2SURP-208ENST00000473835 ZNF625Q96I27 306 aaPredicted RBP3.39□□□□□ -1.87
U2SURP-208ENST00000473835 IGLV1-40P01703 118 aa3.39□□□□□ -1.87
U2SURP-208ENST00000473835 hADV29S1A0JD25 119 aa3.39□□□□□ -1.87
U2SURP-208ENST00000473835 LINC01561Q8N1V8 128 aa3.39□□□□□ -1.87
U2SURP-208ENST00000473835 LINC00467Q9BRT7 94 aa3.39□□□□□ -1.87
U2SURP-208ENST00000473835 PIEZO1Q92508 2521 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 RIF1Q5UIP0 2472 aaKnown RBP3.38□□□□□ -1.87
U2SURP-208ENST00000473835 IGKV3-7A0A075B6H7 116 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 CSMD2Q7Z408 3487 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 ZFHX2Q9C0A1 2572 aaPredicted RBP3.38□□□□□ -1.87
U2SURP-208ENST00000473835 IGHV1OR15-1A0A075B7D0 117 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 F5H768 121 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 IGHV3-11P01762 117 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 KLRB1Q12918 225 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 SS18Q15532 418 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 IGHV3OR16-12A0A075B7B8 117 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 PRORYQ9H606 182 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.38□□□□□ -1.87
U2SURP-208ENST00000473835 IGKV2-29A2NJV5 120 aaPredicted RBP3.38□□□□□ -1.87
U2SURP-208ENST00000473835 SMIM1B2RUZ4 78 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 BAALC-AS2P0C853 105 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 LMO4P61968 165 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 MOB4Q9Y3A3 225 aa3.38□□□□□ -1.87
U2SURP-208ENST00000473835 IGKV2-28A0A075B6P5 120 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 IGKV2D-28P01615 120 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 LINC00242Q5T6M2 205 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 TLN1Q9Y490 2541 aaKnown RBP3.37□□□□□ -1.87
U2SURP-208ENST00000473835 PRM2P04554 102 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 A0A087WVE0 104 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 IGHV3-73A0A0B4J1V6 119 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 EPM2AB3EWF7 344 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 RPL18AQ02543 176 aaKnown RBP3.37□□□□□ -1.87
U2SURP-208ENST00000473835 CRYBG3Q68DQ2 2970 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 H3BUA1 57 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 Q9H8V8 135 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 Q9HAA7 133 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 A0A087WYN8 130 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 K7EMT4 169 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 GAGE2AQ6NT46 116 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 LINC00846Q9NV44 126 aa3.37□□□□□ -1.87
U2SURP-208ENST00000473835 TRAV25A0A0B4J276 109 aa3.36□□□□□ -1.87
U2SURP-208ENST00000473835 SPINK13Q1W4C9 94 aa3.36□□□□□ -1.87
U2SURP-208ENST00000473835 LINC00337Q8N6G1 96 aa3.36□□□□□ -1.87
U2SURP-208ENST00000473835 RPL28P46779 137 aaKnown RBP3.36□□□□□ -1.87
U2SURP-208ENST00000473835 USMG5Q96IX5 58 aa3.36□□□□□ -1.87
U2SURP-208ENST00000473835 K7EQG2 157 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms