RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 ATP6V0E2Q8NHE4 81 aa13.48□□□□□ -0.25
CHMP2B-204ENST00000472024 S100A6P06703 90 aa13.47□□□□□ -0.25
CHMP2B-204ENST00000472024 COTL1Q14019 142 aa13.47□□□□□ -0.25
CHMP2B-204ENST00000472024 RNASEKQ6P5S7 137 aaKnown RBP13.47□□□□□ -0.25
CHMP2B-204ENST00000472024 PACRGQ96M98 296 aaPredicted RBP13.47□□□□□ -0.25
CHMP2B-204ENST00000472024 A0A096LNJ9 63 aa13.46□□□□□ -0.25
CHMP2B-204ENST00000472024 CEMP1Q6PRD7 247 aaPredicted RBP13.46□□□□□ -0.25
CHMP2B-204ENST00000472024 NTM-AS1Q6ZSK4 140 aa13.46□□□□□ -0.25
CHMP2B-204ENST00000472024 TMA7Q9Y2S6 64 aaKnown RBP13.46□□□□□ -0.25
CHMP2B-204ENST00000472024 PLECQ15149 4684 aaKnown RBP13.46□□□□□ -0.26
CHMP2B-204ENST00000472024 IGHV3-38A0A0C4DH36 116 aa13.45□□□□□ -0.26
CHMP2B-204ENST00000472024 NUPR2A6NF83 97 aa13.44□□□□□ -0.26
CHMP2B-204ENST00000472024 HSBP1O75506 76 aa13.44□□□□□ -0.26
CHMP2B-204ENST00000472024 FCER1GP30273 86 aa13.44□□□□□ -0.26
CHMP2B-204ENST00000472024 HIST3H2BBQ8N257 126 aa13.44□□□□□ -0.26
CHMP2B-204ENST00000472024 CHCHD7Q9BUK0 85 aa13.44□□□□□ -0.26
CHMP2B-204ENST00000472024 TRBV6-8A0A0A6YYG3 113 aa13.43□□□□□ -0.26
CHMP2B-204ENST00000472024 IGHV1-24A0A0C4DH33 117 aa13.43□□□□□ -0.26
CHMP2B-204ENST00000472024 LINC01549A6NIU2 74 aa13.43□□□□□ -0.26
CHMP2B-204ENST00000472024 G0S2P27469 103 aa13.43□□□□□ -0.26
CHMP2B-204ENST00000472024 SNRPEP62304 92 aaKnown RBP13.43□□□□□ -0.26
CHMP2B-204ENST00000472024 C20orf203Q8NBC4 194 aa13.43□□□□□ -0.26
CHMP2B-204ENST00000472024 STARD9Q9P2P6 4700 aa13.43□□□□□ -0.26
CHMP2B-204ENST00000472024 CSMD3Q7Z407 3707 aa13.43□□□□□ -0.26
CHMP2B-204ENST00000472024 TCTAP57738 103 aa13.42□□□□□ -0.26
CHMP2B-204ENST00000472024 H7C423 109 aa13.41□□□□□ -0.26
CHMP2B-204ENST00000472024 HBDP02042 147 aa13.41□□□□□ -0.26
CHMP2B-204ENST00000472024 PDZD11Q5EBL8 140 aa13.41□□□□□ -0.26
CHMP2B-204ENST00000472024 TOMM6Q96B49 74 aa13.41□□□□□ -0.26
CHMP2B-204ENST00000472024 TRBV25-1A0A075B6N4 114 aa13.4□□□□□ -0.26
CHMP2B-204ENST00000472024 NUDT3O95989 172 aa13.4□□□□□ -0.26
CHMP2B-204ENST00000472024 AMTP48728 403 aa13.4□□□□□ -0.26
CHMP2B-204ENST00000472024 LELP1Q5T871 98 aa13.4□□□□□ -0.26
CHMP2B-204ENST00000472024 LYPD5Q6UWN5 251 aa13.4□□□□□ -0.26
CHMP2B-204ENST00000472024 WWC2-AS2Q96NR7 200 aa13.4□□□□□ -0.26
CHMP2B-204ENST00000472024 APLNQ9ULZ1 77 aa13.39□□□□□ -0.27
CHMP2B-204ENST00000472024 KLK5Q9Y337 293 aaPredicted RBP13.39□□□□□ -0.27
CHMP2B-204ENST00000472024 IFITM10A6NMD0 228 aa13.38□□□□□ -0.27
CHMP2B-204ENST00000472024 IGLL5B9A064 214 aa13.38□□□□□ -0.27
CHMP2B-204ENST00000472024 NPSP0C0P6 89 aa13.38□□□□□ -0.27
CHMP2B-204ENST00000472024 C2orf66Q6UXQ4 117 aa13.38□□□□□ -0.27
CHMP2B-204ENST00000472024 FAM19A2Q8N3H0 131 aa13.38□□□□□ -0.27
CHMP2B-204ENST00000472024 TMEM243Q9BU79 118 aa13.38□□□□□ -0.27
CHMP2B-204ENST00000472024 TIMM21Q9BVV7 248 aa13.38□□□□□ -0.27
CHMP2B-204ENST00000472024 CYSLTR1Q9Y271 337 aa13.38□□□□□ -0.27
CHMP2B-204ENST00000472024 MRPL52Q86TS9 123 aaKnown RBP13.37□□□□□ -0.27
CHMP2B-204ENST00000472024 TMEM18Q96B42 140 aa13.37□□□□□ -0.27
CHMP2B-204ENST00000472024 PYGO1Q9Y3Y4 419 aa13.37□□□□□ -0.27
CHMP2B-204ENST00000472024 PMCHL1Q16048 86 aa13.36□□□□□ -0.27
CHMP2B-204ENST00000472024 ESRGQ1W209 222 aa13.36□□□□□ -0.27
CHMP2B-204ENST00000472024 MUC7Q8TAX7 377 aa13.36□□□□□ -0.27
CHMP2B-204ENST00000472024 DEFB104AQ8WTQ1 72 aa13.36□□□□□ -0.27
CHMP2B-204ENST00000472024 HIST1H2BLQ99880 126 aa13.36□□□□□ -0.27
CHMP2B-204ENST00000472024 CSDC2Q9Y534 153 aaKnown RBP13.36□□□□□ -0.27
CHMP2B-204ENST00000472024 IGIPA6NJ69 53 aa13.35□□□□□ -0.27
CHMP2B-204ENST00000472024 BTF3P20290 206 aaKnown RBP13.35□□□□□ -0.27
CHMP2B-204ENST00000472024 TIMM17AQ99595 171 aa13.35□□□□□ -0.27
CHMP2B-204ENST00000472024 SPANXA1Q9NS26 97 aa13.35□□□□□ -0.27
CHMP2B-204ENST00000472024 RPL39P62891 51 aaKnown RBP13.34□□□□□ -0.27
CHMP2B-204ENST00000472024 ERASQ7Z444 233 aa13.34□□□□□ -0.27
CHMP2B-204ENST00000472024 UBE2D4Q9Y2X8 147 aa13.34□□□□□ -0.27
CHMP2B-204ENST00000472024 VPS13DQ5THJ4 4388 aa13.33□□□□□ -0.28
CHMP2B-204ENST00000472024 LEPROTL1O95214 131 aa13.33□□□□□ -0.28
CHMP2B-204ENST00000472024 PKIAP61925 76 aa13.33□□□□□ -0.28
CHMP2B-204ENST00000472024 SMAGPQ0VAQ4 97 aa13.33□□□□□ -0.28
CHMP2B-204ENST00000472024 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.32□□□□□ -0.28
CHMP2B-204ENST00000472024 IGKV2-29A2NJV5 120 aaPredicted RBP13.32□□□□□ -0.28
CHMP2B-204ENST00000472024 ZNF25P17030 456 aaPredicted RBP13.32□□□□□ -0.28
CHMP2B-204ENST00000472024 S100A2P29034 98 aa13.32□□□□□ -0.28
CHMP2B-204ENST00000472024 FAM104AQ969W3 186 aa13.32□□□□□ -0.28
CHMP2B-204ENST00000472024 TMEM141Q96I45 108 aa13.32□□□□□ -0.28
CHMP2B-204ENST00000472024 UPK3BQ9BT76 320 aa13.32□□□□□ -0.28
CHMP2B-204ENST00000472024 HSPB8Q9UJY1 196 aa13.32□□□□□ -0.28
CHMP2B-204ENST00000472024 MRPS16Q9Y3D3 137 aaKnown RBP13.32□□□□□ -0.28
CHMP2B-204ENST00000472024 A0A1B0GUV1 79 aa13.31□□□□□ -0.28
CHMP2B-204ENST00000472024 ATP5LO75964 103 aa13.31□□□□□ -0.28
CHMP2B-204ENST00000472024 MRPS36P82909 103 aaKnown RBP13.31□□□□□ -0.28
CHMP2B-204ENST00000472024 FGF6P10767 208 aa13.3□□□□□ -0.28
CHMP2B-204ENST00000472024 CHCHD5Q9BSY4 110 aa13.3□□□□□ -0.28
CHMP2B-204ENST00000472024 TRAV8-6A0A0B4J262 113 aa13.29□□□□□ -0.28
CHMP2B-204ENST00000472024 UBE2L6O14933 153 aa13.29□□□□□ -0.28
CHMP2B-204ENST00000472024 CCL18P55774 89 aa13.29□□□□□ -0.28
CHMP2B-204ENST00000472024 LINC00173Q6ZV60 143 aa13.29□□□□□ -0.28
CHMP2B-204ENST00000472024 SCGB3A1Q96QR1 104 aa13.29□□□□□ -0.28
CHMP2B-204ENST00000472024 LINC00588Q9Y4M8 146 aa13.29□□□□□ -0.28
CHMP2B-204ENST00000472024 FABP4P15090 132 aa13.28□□□□□ -0.28
CHMP2B-204ENST00000472024 IFI27L1Q96BM0 104 aa13.28□□□□□ -0.28
CHMP2B-204ENST00000472024 IGLV4-3A0A075B6K6 122 aa13.27□□□□□ -0.29
CHMP2B-204ENST00000472024 C3orf84H3BNL1 204 aa13.27□□□□□ -0.29
CHMP2B-204ENST00000472024 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.27□□□□□ -0.29
CHMP2B-204ENST00000472024 GAGE6Q13070 117 aa13.27□□□□□ -0.29
CHMP2B-204ENST00000472024 SPATA12Q7Z6I5 190 aa13.27□□□□□ -0.29
CHMP2B-204ENST00000472024 AMELXQ99217 191 aa13.26□□□□□ -0.29
CHMP2B-204ENST00000472024 CDC42SE2Q9NRR3 84 aa13.26□□□□□ -0.29
CHMP2B-204ENST00000472024 DNAH1Q9P2D7 4330 aa13.25□□□□□ -0.29
CHMP2B-204ENST00000472024 RBX1P62877 108 aa13.25□□□□□ -0.29
CHMP2B-204ENST00000472024 MPV17L2Q567V2 206 aa13.25□□□□□ -0.29
CHMP2B-204ENST00000472024 LINC01556Q5JQF7 62 aa13.25□□□□□ -0.29
CHMP2B-204ENST00000472024 PAPPA-AS1Q5QFB9 102 aa13.25□□□□□ -0.29
CHMP2B-204ENST00000472024 ZFAND6Q6FIF0 208 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms