RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 C12orf57Q99622 126 aa4.21□□□□□ -1.74
HDAC1-204ENST00000471488 WFDC1Q9HC57 220 aa4.21□□□□□ -1.74
HDAC1-204ENST00000471488 PET100P0DJ07 73 aa4.2□□□□□ -1.74
HDAC1-204ENST00000471488 XCL1P47992 114 aa4.2□□□□□ -1.74
HDAC1-204ENST00000471488 AMTP48728 403 aa4.2□□□□□ -1.74
HDAC1-204ENST00000471488 IQCJQ1A5X6 159 aa4.2□□□□□ -1.74
HDAC1-204ENST00000471488 DNLZQ5SXM8 178 aa4.2□□□□□ -1.74
HDAC1-204ENST00000471488 PRR27Q6MZM9 219 aa4.2□□□□□ -1.74
HDAC1-204ENST00000471488 RNASEKQ6P5S7 137 aaKnown RBP4.2□□□□□ -1.74
HDAC1-204ENST00000471488 FER1L6-AS1Q8NA97 138 aa4.2□□□□□ -1.74
HDAC1-204ENST00000471488 PPP1R1CQ8WVI7 109 aa4.2□□□□□ -1.74
HDAC1-204ENST00000471488 CHCHD10Q8WYQ3 142 aaPredicted RBP4.2□□□□□ -1.74
HDAC1-204ENST00000471488 PKIGQ9Y2B9 76 aa4.2□□□□□ -1.74
HDAC1-204ENST00000471488 LINC00862A6NCI5 91 aa4.19□□□□□ -1.74
HDAC1-204ENST00000471488 ZNF561-AS1K7EIQ3 104 aa4.19□□□□□ -1.74
HDAC1-204ENST00000471488 DEFA1P59665 94 aa4.19□□□□□ -1.74
HDAC1-204ENST00000471488 RPL18AQ02543 176 aaKnown RBP4.19□□□□□ -1.74
HDAC1-204ENST00000471488 LINC01559Q495D7 138 aa4.19□□□□□ -1.74
HDAC1-204ENST00000471488 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
HDAC1-204ENST00000471488 PHF5AQ7RTV0 110 aaKnown RBP4.19□□□□□ -1.74
HDAC1-204ENST00000471488 DIRC1Q969H9 104 aa4.19□□□□□ -1.74
HDAC1-204ENST00000471488 AP1S3Q96PC3 154 aa4.19□□□□□ -1.74
HDAC1-204ENST00000471488 ACTR3CQ9C0K3 210 aaPredicted RBP4.19□□□□□ -1.74
HDAC1-204ENST00000471488 A0A087WZ39 114 aa4.18□□□□□ -1.74
HDAC1-204ENST00000471488 TRAV1-1A0A0B4J248 108 aa4.18□□□□□ -1.74
HDAC1-204ENST00000471488 A0A1W2PRE2 83 aa4.18□□□□□ -1.74
HDAC1-204ENST00000471488 SSNA1O43805 119 aa4.18□□□□□ -1.74
HDAC1-204ENST00000471488 MPC2O95563 127 aa4.18□□□□□ -1.74
HDAC1-204ENST00000471488 BCL2P10415 239 aa4.18□□□□□ -1.74
HDAC1-204ENST00000471488 CST9LP1Q5W188 147 aa4.18□□□□□ -1.74
HDAC1-204ENST00000471488 STOML3Q8TAV4 291 aa4.18□□□□□ -1.74
HDAC1-204ENST00000471488 FMC1Q96HJ9 113 aa4.18□□□□□ -1.74
HDAC1-204ENST00000471488 ZFP30Q9Y2G7 519 aa4.18□□□□□ -1.74
HDAC1-204ENST00000471488 GVQW2A0A096LPI5 108 aaPredicted RBP4.17□□□□□ -1.74
HDAC1-204ENST00000471488 LOC107984640A0A0U1RRK4 108 aa4.17□□□□□ -1.74
HDAC1-204ENST00000471488 A0A1B0GUV1 79 aa4.17□□□□□ -1.74
HDAC1-204ENST00000471488 A0A1W2PNN7 141 aa4.17□□□□□ -1.74
HDAC1-204ENST00000471488 MBP02144 154 aa4.17□□□□□ -1.74
HDAC1-204ENST00000471488 SMIM6P0DI80 62 aa4.17□□□□□ -1.74
HDAC1-204ENST00000471488 AKR1C3P42330 323 aa4.17□□□□□ -1.74
HDAC1-204ENST00000471488 PTTG1IPP53801 180 aa4.17□□□□□ -1.74
HDAC1-204ENST00000471488 SYCNQ0VAF6 134 aa4.17□□□□□ -1.74
HDAC1-204ENST00000471488 ZNF674Q2M3X9 581 aa4.17□□□□□ -1.74
HDAC1-204ENST00000471488 SUMO4Q6EEV6 95 aa4.17□□□□□ -1.74
HDAC1-204ENST00000471488 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.16□□□□□ -1.74
HDAC1-204ENST00000471488 IGKV2-29A2NJV5 120 aaPredicted RBP4.16□□□□□ -1.74
HDAC1-204ENST00000471488 H0Y9J4 135 aa4.16□□□□□ -1.74
HDAC1-204ENST00000471488 CCL25O15444 150 aa4.16□□□□□ -1.74
HDAC1-204ENST00000471488 IGLV7-43P04211 117 aa4.16□□□□□ -1.74
HDAC1-204ENST00000471488 S100PP25815 95 aa4.16□□□□□ -1.74
HDAC1-204ENST00000471488 ATP6V0CP27449 155 aa4.16□□□□□ -1.74
HDAC1-204ENST00000471488 H2BFSP57053 126 aa4.16□□□□□ -1.74
HDAC1-204ENST00000471488 C9orf116Q5BN46 136 aaPredicted RBP4.16□□□□□ -1.74
HDAC1-204ENST00000471488 S100ZQ8WXG8 99 aa4.16□□□□□ -1.74
HDAC1-204ENST00000471488 HIST1H2BAQ96A08 127 aa4.16□□□□□ -1.74
HDAC1-204ENST00000471488 IGLV1-50A0A075B6I6 118 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 IGHV1-58A0A0C4DH39 117 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 FAM74A7A6NL05 159 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 M0QY20 66 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 H2AFB1P0C5Y9 115 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 MALP21145 153 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 CAMPP49913 170 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 FOXI1Q12951 378 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 LBHQ53QV2 105 aaPredicted RBP4.15□□□□□ -1.75
HDAC1-204ENST00000471488 RASL11AQ6T310 242 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 ISOC2Q96AB3 205 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 BTF3L4Q96K17 158 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 CAMK2N2Q96S95 79 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.75
HDAC1-204ENST00000471488 A0A1B0GV50 99 aa4.14□□□□□ -1.75
HDAC1-204ENST00000471488 SCO1O75880 301 aa4.14□□□□□ -1.75
HDAC1-204ENST00000471488 LTAP01374 205 aa4.14□□□□□ -1.75
HDAC1-204ENST00000471488 S100A8P05109 93 aa4.14□□□□□ -1.75
HDAC1-204ENST00000471488 RPL13AP40429 203 aaKnown RBP4.14□□□□□ -1.75
HDAC1-204ENST00000471488 UBE2BP63146 152 aa4.14□□□□□ -1.75
HDAC1-204ENST00000471488 EIF5AL1Q6IS14 154 aaKnown RBP4.14□□□□□ -1.75
HDAC1-204ENST00000471488 FAM19A5Q7Z5A7 132 aaPredicted RBP4.14□□□□□ -1.75
HDAC1-204ENST00000471488 OR5A1Q8NGJ0 315 aa4.14□□□□□ -1.75
HDAC1-204ENST00000471488 TMEM101Q96IK0 257 aa4.14□□□□□ -1.75
HDAC1-204ENST00000471488 OPRPNQ99935 248 aaPredicted RBP4.14□□□□□ -1.75
HDAC1-204ENST00000471488 CCDC32Q9BV29 185 aa4.14□□□□□ -1.75
HDAC1-204ENST00000471488 NKX6-2Q9C056 277 aaPredicted RBP4.14□□□□□ -1.75
HDAC1-204ENST00000471488 CDIP1Q9H305 208 aa4.14□□□□□ -1.75
HDAC1-204ENST00000471488 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
HDAC1-204ENST00000471488 IGLV4-69A0A075B6H9 119 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 CTXND1A0A1B0GTU2 59 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 SNAI2O43623 268 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 APCSP02743 223 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 OR5AL1P0C617 328 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 FGF6P10767 208 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 SERF2P84101 59 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 IFITM3Q01628 133 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 SS18Q15532 418 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 AKR1C8PQ5T2L2 129 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 OR2D3Q8NGH3 330 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 RETNLBQ9BQ08 111 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 PSMG3Q9BT73 122 aaPredicted RBP4.13□□□□□ -1.75
HDAC1-204ENST00000471488 NIT2Q9NQR4 276 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 TNFSF18Q9UNG2 199 aa4.13□□□□□ -1.75
HDAC1-204ENST00000471488 LINC00959A0A1B0GUT2 108 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms