RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 LINC00614P0C842 121 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 GAGE12FP0CL80 117 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 GAGE12GP0CL81 117 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 GAGE12IP0CL82 117 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 ESDP10768 282 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 S100A2P29034 98 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 DAD1P61803 113 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 SUMO2P61956 95 aaKnown RBP4.71□□□□□ -1.66
VAMP3-202ENST00000470357 UFSP1Q6NVU6 142 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 FA2HQ7L5A8 372 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 SAMD10Q9BYL1 202 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 JPT2Q9H910 190 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 NIT2Q9NQR4 276 aa4.71□□□□□ -1.66
VAMP3-202ENST00000470357 TRBV6-4A0A1B0GX49 114 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 C5orf52A6NGY3 159 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 VCYO14598 125 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 HSBP1O75506 76 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 SCGB1D1O95968 90 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 NPYP01303 97 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 ATP5G1P05496 136 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 DEFB130BP0DP73 79 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 DEFB130AP0DP74 79 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 RPL36AP83881 106 aaKnown RBP4.7□□□□□ -1.66
VAMP3-202ENST00000470357 RHOHQ15669 191 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 SBSPONQ8IVN8 264 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 Q8N8P6 123 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 NRACQ8N912 160 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 RPL36ALQ969Q0 106 aaKnown RBP4.7□□□□□ -1.66
VAMP3-202ENST00000470357 TMEM18Q96B42 140 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 PACRGQ96M98 296 aaPredicted RBP4.7□□□□□ -1.66
VAMP3-202ENST00000470357 PRADC1Q9BSG0 188 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 SMIM2Q9BVW6 85 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 TNFRSF18Q9Y5U5 241 aa4.7□□□□□ -1.66
VAMP3-202ENST00000470357 TRAV26-2A0A0B4J265 109 aa4.69□□□□□ -1.66
VAMP3-202ENST00000470357 SMKR1H3BMG3 65 aa4.69□□□□□ -1.66
VAMP3-202ENST00000470357 K7EQD1 137 aa4.69□□□□□ -1.66
VAMP3-202ENST00000470357 SERF1AO75920 110 aa4.69□□□□□ -1.66
VAMP3-202ENST00000470357 GATA1P15976 413 aaPredicted RBP4.69□□□□□ -1.66
VAMP3-202ENST00000470357 SNRPEP62304 92 aaKnown RBP4.69□□□□□ -1.66
VAMP3-202ENST00000470357 ORMDL2Q53FV1 153 aa4.69□□□□□ -1.66
VAMP3-202ENST00000470357 RNASEKQ6P5S7 137 aaKnown RBP4.69□□□□□ -1.66
VAMP3-202ENST00000470357 NIT1Q86X76 327 aa4.69□□□□□ -1.66
VAMP3-202ENST00000470357 MUC7Q8TAX7 377 aa4.69□□□□□ -1.66
VAMP3-202ENST00000470357 ZNF479Q96JC4 524 aa4.69□□□□□ -1.66
VAMP3-202ENST00000470357 KIR2DL4Q99706 377 aa4.69□□□□□ -1.66
VAMP3-202ENST00000470357 PRO0255Q9UI72 69 aa4.69□□□□□ -1.66
VAMP3-202ENST00000470357 DNAH10Q8IVF4 4471 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 TRBV7-3A0A075B6L6 115 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 IGHV3-73A0A0B4J1V6 119 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 TRBV27A0A0K0K1C4 114 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 LOC389332A0A1B0GUA5 103 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 SDHAF1A6NFY7 115 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 LINC01546A6NGU7 62 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 I3L3M4 83 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 DEFB4AO15263 64 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 IFI27P40305 119 aaPredicted RBP4.68□□□□□ -1.66
VAMP3-202ENST00000470357 POLR2KP53803 58 aaKnown RBP4.68□□□□□ -1.66
VAMP3-202ENST00000470357 IQCJQ1A5X6 159 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 TMEM97Q5BJF2 176 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 SH2D6Q7Z4S9 175 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 DAZ4Q86SG3 579 aaKnown RBP4.68□□□□□ -1.66
VAMP3-202ENST00000470357 RPL39LQ96EH5 51 aaKnown RBP4.68□□□□□ -1.66
VAMP3-202ENST00000470357 TMEM70Q9BUB7 260 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 RETNQ9HD89 108 aa4.68□□□□□ -1.66
VAMP3-202ENST00000470357 DAZ3Q9NR90 486 aaKnown RBP4.68□□□□□ -1.66
VAMP3-202ENST00000470357 FCER1GP30273 86 aa4.67□□□□□ -1.66
VAMP3-202ENST00000470357 AMTP48728 403 aa4.67□□□□□ -1.66
VAMP3-202ENST00000470357 SMAGPQ0VAQ4 97 aa4.67□□□□□ -1.66
VAMP3-202ENST00000470357 LAGE3Q14657 143 aa4.67□□□□□ -1.66
VAMP3-202ENST00000470357 HIST3H2BBQ8N257 126 aa4.67□□□□□ -1.66
VAMP3-202ENST00000470357 SLC25A29Q8N8R3 303 aa4.67□□□□□ -1.66
VAMP3-202ENST00000470357 NEXN-AS1Q8NBZ9 246 aa4.67□□□□□ -1.66
VAMP3-202ENST00000470357 C11orf45Q8TAV5 145 aa4.67□□□□□ -1.66
VAMP3-202ENST00000470357 HHLA3Q9XRX5 114 aa4.67□□□□□ -1.66
VAMP3-202ENST00000470357 KIAA1109Q2LD37 5005 aa4.67□□□□□ -1.66
VAMP3-202ENST00000470357 HECTD4Q9Y4D8 3996 aa4.66□□□□□ -1.66
VAMP3-202ENST00000470357 ALMS1Q8TCU4 4167 aa4.66□□□□□ -1.66
VAMP3-202ENST00000470357 IGLV2-18A0A075B6J9 118 aa4.66□□□□□ -1.66
VAMP3-202ENST00000470357 A0A0J9YWU9 116 aa4.66□□□□□ -1.66
VAMP3-202ENST00000470357 H3BNG1 76 aa4.66□□□□□ -1.66
VAMP3-202ENST00000470357 GAS8-AS1O95177 125 aa4.66□□□□□ -1.66
VAMP3-202ENST00000470357 HBDP02042 147 aa4.66□□□□□ -1.66
VAMP3-202ENST00000470357 CRYBA4P53673 196 aa4.66□□□□□ -1.66
VAMP3-202ENST00000470357 COTL1Q14019 142 aa4.66□□□□□ -1.66
VAMP3-202ENST00000470357 ZNRF2Q8NHG8 242 aa4.66□□□□□ -1.66
VAMP3-202ENST00000470357 HSPB8Q9UJY1 196 aa4.66□□□□□ -1.66
VAMP3-202ENST00000470357 CELA1Q9UNI1 258 aa4.66□□□□□ -1.66
VAMP3-202ENST00000470357 KMT2AQ03164 3969 aa4.65□□□□□ -1.66
VAMP3-202ENST00000470357 TRAV26-1A0A087WT03 109 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 IGHV1-24A0A0C4DH33 117 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 F5H768 121 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 TRIAP1O43715 76 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 ATP5LO75964 103 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 LEPROTL1O95214 131 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 FABP4P15090 132 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 AKR1D1P51857 326 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 UBE2D3P61077 147 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 UBE2D2P62837 147 aa4.65□□□□□ -1.67
VAMP3-202ENST00000470357 MRPL23Q16540 153 aaKnown RBP4.65□□□□□ -1.67
VAMP3-202ENST00000470357 C12orf74Q32Q52 190 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms