RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 TSKUQ8WUA8 353 aa13.95□□□□□ -0.18
RTN4R-205ENST00000469601 OSTCQ9NRP0 149 aa13.95□□□□□ -0.18
RTN4R-205ENST00000469601 FAM30AQ9NZY2 134 aa13.95□□□□□ -0.18
RTN4R-205ENST00000469601 TRAV26-2A0A0B4J265 109 aa13.94□□□□□ -0.18
RTN4R-205ENST00000469601 REG3AQ06141 175 aa13.94□□□□□ -0.18
RTN4R-205ENST00000469601 FAM74A3Q4VXF1 159 aa13.94□□□□□ -0.18
RTN4R-205ENST00000469601 CLPSL2Q6UWE3 100 aa13.94□□□□□ -0.18
RTN4R-205ENST00000469601 Q6ZSA8 131 aa13.94□□□□□ -0.18
RTN4R-205ENST00000469601 TRAV8-4A0A0B4J246 113 aa13.93□□□□□ -0.18
RTN4R-205ENST00000469601 A0A1B0GUT8 65 aa13.93□□□□□ -0.18
RTN4R-205ENST00000469601 NCR2O95944 276 aa13.93□□□□□ -0.18
RTN4R-205ENST00000469601 HAMPP81172 84 aa13.93□□□□□ -0.18
RTN4R-205ENST00000469601 USP17L23D6RBM5 183 aa13.92□□□□□ -0.18
RTN4R-205ENST00000469601 INAFM2P0DMQ5 153 aa13.92□□□□□ -0.18
RTN4R-205ENST00000469601 TMEM241Q24JQ0 296 aa13.92□□□□□ -0.18
RTN4R-205ENST00000469601 C20orf203Q8NBC4 194 aa13.92□□□□□ -0.18
RTN4R-205ENST00000469601 HIGD1CA8MV81 97 aa13.91□□□□□ -0.18
RTN4R-205ENST00000469601 ABCA13Q86UQ4 5058 aa13.91□□□□□ -0.18
RTN4R-205ENST00000469601 RPL39LQ96EH5 51 aaKnown RBP13.9□□□□□ -0.18
RTN4R-205ENST00000469601 IGLV4-60A0A075B6I1 120 aa13.89□□□□□ -0.19
RTN4R-205ENST00000469601 PEA15Q15121 130 aa13.89□□□□□ -0.19
RTN4R-205ENST00000469601 LINC01620Q4KN68 170 aa13.89□□□□□ -0.19
RTN4R-205ENST00000469601 TMEM191AQ9H0A3 160 aa13.89□□□□□ -0.19
RTN4R-205ENST00000469601 SMDT1Q9H4I9 107 aa13.89□□□□□ -0.19
RTN4R-205ENST00000469601 SDHAF1A6NFY7 115 aa13.88□□□□□ -0.19
RTN4R-205ENST00000469601 H7C423 109 aa13.88□□□□□ -0.19
RTN4R-205ENST00000469601 DGAT2L7PQ6IED9 249 aa13.88□□□□□ -0.19
RTN4R-205ENST00000469601 KRTAP26-1Q6PEX3 210 aa13.88□□□□□ -0.19
RTN4R-205ENST00000469601 CLRN3Q8NCR9 226 aa13.88□□□□□ -0.19
RTN4R-205ENST00000469601 DEFB104AQ8WTQ1 72 aa13.88□□□□□ -0.19
RTN4R-205ENST00000469601 TRBV6-5A0A0K0K1A5 114 aa13.87□□□□□ -0.19
RTN4R-205ENST00000469601 AMMECR1LQ6DCA0 310 aa13.87□□□□□ -0.19
RTN4R-205ENST00000469601 ISOC2Q96AB3 205 aa13.87□□□□□ -0.19
RTN4R-205ENST00000469601 IGLV10-54A0A075B6I4 117 aa13.86□□□□□ -0.19
RTN4R-205ENST00000469601 I3L3M4 83 aa13.86□□□□□ -0.19
RTN4R-205ENST00000469601 APCSP02743 223 aa13.86□□□□□ -0.19
RTN4R-205ENST00000469601 RIGQ13278 110 aa13.86□□□□□ -0.19
RTN4R-205ENST00000469601 MRAP2Q96G30 205 aa13.86□□□□□ -0.19
RTN4R-205ENST00000469601 NAT8Q9UHE5 227 aa13.86□□□□□ -0.19
RTN4R-205ENST00000469601 V9GYV3 84 aa13.86□□□□□ -0.19
RTN4R-205ENST00000469601 PRSS1P07477 247 aa13.85□□□□□ -0.19
RTN4R-205ENST00000469601 PMCHP20382 165 aa13.85□□□□□ -0.19
RTN4R-205ENST00000469601 RPL23P62829 140 aaKnown RBP13.85□□□□□ -0.19
RTN4R-205ENST00000469601 ST20Q9HBF5 79 aa13.85□□□□□ -0.19
RTN4R-205ENST00000469601 NAT8BQ9UHF3 227 aa13.85□□□□□ -0.19
RTN4R-205ENST00000469601 PLA2G1BP04054 148 aaKnown RBP13.84□□□□□ -0.19
RTN4R-205ENST00000469601 ADIRFQ15847 76 aa13.84□□□□□ -0.19
RTN4R-205ENST00000469601 CHAC1Q9BUX1 264 aa13.84□□□□□ -0.19
RTN4R-205ENST00000469601 C9JQL5 133 aa13.82□□□□□ -0.2
RTN4R-205ENST00000469601 PPP1R17O96001 155 aa13.82□□□□□ -0.2
RTN4R-205ENST00000469601 ZNF25P17030 456 aaPredicted RBP13.82□□□□□ -0.2
RTN4R-205ENST00000469601 RAB4AP20338 218 aa13.82□□□□□ -0.2
RTN4R-205ENST00000469601 RNASEKQ6P5S7 137 aaKnown RBP13.82□□□□□ -0.2
RTN4R-205ENST00000469601 SCXQ7RTU7 201 aa13.82□□□□□ -0.2
RTN4R-205ENST00000469601 NUP35Q8NFH5 326 aa13.82□□□□□ -0.2
RTN4R-205ENST00000469601 LINC00528Q8N1L1 170 aa13.81□□□□□ -0.2
RTN4R-205ENST00000469601 RNF185Q96GF1 192 aa13.81□□□□□ -0.2
RTN4R-205ENST00000469601 BTF3L4Q96K17 158 aa13.81□□□□□ -0.2
RTN4R-205ENST00000469601 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.8□□□□□ -0.2
RTN4R-205ENST00000469601 IGKV2-29A2NJV5 120 aaPredicted RBP13.8□□□□□ -0.2
RTN4R-205ENST00000469601 FGF6P10767 208 aa13.8□□□□□ -0.2
RTN4R-205ENST00000469601 AMN1Q8IY45 258 aa13.8□□□□□ -0.2
RTN4R-205ENST00000469601 C9orf163Q8N9P6 203 aa13.8□□□□□ -0.2
RTN4R-205ENST00000469601 TMEM101Q96IK0 257 aa13.8□□□□□ -0.2
RTN4R-205ENST00000469601 hDV102S1A0JD36 115 aa13.79□□□□□ -0.2
RTN4R-205ENST00000469601 SRSF3P84103 164 aaKnown RBP13.79□□□□□ -0.2
RTN4R-205ENST00000469601 CFAP161Q6P656 301 aa13.79□□□□□ -0.2
RTN4R-205ENST00000469601 AP5S1Q9NUS5 200 aa13.79□□□□□ -0.2
RTN4R-205ENST00000469601 TRBV27A0A0K0K1C4 114 aa13.78□□□□□ -0.2
RTN4R-205ENST00000469601 A0A1B0GW15 77 aa13.78□□□□□ -0.2
RTN4R-205ENST00000469601 CNBPP62633 177 aaKnown RBP13.78□□□□□ -0.2
RTN4R-205ENST00000469601 CIRBP-AS1Q8TBR5 109 aa13.78□□□□□ -0.2
RTN4R-205ENST00000469601 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.77□□□□□ -0.21
RTN4R-205ENST00000469601 IGKV3OR2-268A0A0C4DH90 116 aa13.77□□□□□ -0.21
RTN4R-205ENST00000469601 SMIM27A0A1W2PRY6 76 aa13.77□□□□□ -0.21
RTN4R-205ENST00000469601 GAS8-AS1O95177 125 aa13.77□□□□□ -0.21
RTN4R-205ENST00000469601 TSHBP01222 138 aa13.77□□□□□ -0.21
RTN4R-205ENST00000469601 POLR2KP53803 58 aaKnown RBP13.77□□□□□ -0.21
RTN4R-205ENST00000469601 GAGE12HA6NDE8 117 aa13.76□□□□□ -0.21
RTN4R-205ENST00000469601 VCYO14598 125 aa13.76□□□□□ -0.21
RTN4R-205ENST00000469601 ESDP10768 282 aa13.76□□□□□ -0.21
RTN4R-205ENST00000469601 RPS10P46783 165 aaKnown RBP13.76□□□□□ -0.21
RTN4R-205ENST00000469601 TMEM242Q9NWH2 141 aa13.76□□□□□ -0.21
RTN4R-205ENST00000469601 OR5A1Q8NGJ0 315 aa13.75□□□□□ -0.21
RTN4R-205ENST00000469601 PPP1R2P9O14990 202 aa13.74□□□□□ -0.21
RTN4R-205ENST00000469601 S100A8P05109 93 aa13.74□□□□□ -0.21
RTN4R-205ENST00000469601 FCER1GP30273 86 aa13.74□□□□□ -0.21
RTN4R-205ENST00000469601 CHCHD10Q8WYQ3 142 aaPredicted RBP13.74□□□□□ -0.21
RTN4R-205ENST00000469601 C7orf77A4D0Y5 90 aa13.73□□□□□ -0.21
RTN4R-205ENST00000469601 LINC00862A6NCI5 91 aa13.73□□□□□ -0.21
RTN4R-205ENST00000469601 SUMO2P61956 95 aaKnown RBP13.73□□□□□ -0.21
RTN4R-205ENST00000469601 SMAGPQ0VAQ4 97 aa13.73□□□□□ -0.21
RTN4R-205ENST00000469601 FAM104BQ5XKR9 115 aa13.73□□□□□ -0.21
RTN4R-205ENST00000469601 MRPL52Q86TS9 123 aaKnown RBP13.73□□□□□ -0.21
RTN4R-205ENST00000469601 KIR2DL4Q99706 377 aa13.73□□□□□ -0.21
RTN4R-205ENST00000469601 CAMPP49913 170 aa13.72□□□□□ -0.21
RTN4R-205ENST00000469601 RAB14P61106 215 aa13.72□□□□□ -0.21
RTN4R-205ENST00000469601 SRRM2Q9UQ35 2752 aaKnown RBP13.71□□□□□ -0.21
RTN4R-205ENST00000469601 IGHV3-64A0A075B6Q5 118 aa13.71□□□□□ -0.21
RTN4R-205ENST00000469601 F8W036 122 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms