RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 HAMPP81172 84 aa11.21□□□□□ -0.61
SSBP1-207ENST00000468267 LINC00269Q8N2A0 174 aa11.21□□□□□ -0.61
SSBP1-207ENST00000468267 TMEM243Q9BU79 118 aa11.21□□□□□ -0.61
SSBP1-207ENST00000468267 TRAV26-2A0A0B4J265 109 aa11.2□□□□□ -0.62
SSBP1-207ENST00000468267 SMR3BP02814 79 aaPredicted RBP11.2□□□□□ -0.62
SSBP1-207ENST00000468267 A0A1B0GUV1 79 aa11.19□□□□□ -0.62
SSBP1-207ENST00000468267 COTL1Q14019 142 aa11.19□□□□□ -0.62
SSBP1-207ENST00000468267 C14orf177Q52M58 125 aa11.19□□□□□ -0.62
SSBP1-207ENST00000468267 Q5VSD8 79 aa11.19□□□□□ -0.62
SSBP1-207ENST00000468267 Q6ZSA8 131 aa11.19□□□□□ -0.62
SSBP1-207ENST00000468267 DEFB104AQ8WTQ1 72 aa11.19□□□□□ -0.62
SSBP1-207ENST00000468267 OSTCQ9NRP0 149 aa11.19□□□□□ -0.62
SSBP1-207ENST00000468267 LOC100996750A0A140TA64 210 aa11.18□□□□□ -0.62
SSBP1-207ENST00000468267 CLPSL2Q6UWE3 100 aa11.18□□□□□ -0.62
SSBP1-207ENST00000468267 TEX261Q6UWH6 196 aa11.18□□□□□ -0.62
SSBP1-207ENST00000468267 TSKUQ8WUA8 353 aa11.18□□□□□ -0.62
SSBP1-207ENST00000468267 KRTAP4-6Q9BYQ5 205 aa11.18□□□□□ -0.62
SSBP1-207ENST00000468267 GFRA4Q9GZZ7 299 aa11.18□□□□□ -0.62
SSBP1-207ENST00000468267 FAM231BA6NCW3 169 aa11.17□□□□□ -0.62
SSBP1-207ENST00000468267 REG3AQ06141 175 aa11.17□□□□□ -0.62
SSBP1-207ENST00000468267 LINC01620Q4KN68 170 aa11.17□□□□□ -0.62
SSBP1-207ENST00000468267 KRTAP26-1Q6PEX3 210 aa11.17□□□□□ -0.62
SSBP1-207ENST00000468267 C20orf203Q8NBC4 194 aa11.17□□□□□ -0.62
SSBP1-207ENST00000468267 BORCS7Q96B45 105 aa11.17□□□□□ -0.62
SSBP1-207ENST00000468267 RPL39LQ96EH5 51 aaKnown RBP11.17□□□□□ -0.62
SSBP1-207ENST00000468267 IGLV4-60A0A075B6I1 120 aa11.16□□□□□ -0.62
SSBP1-207ENST00000468267 A0A1B0GUT8 65 aa11.16□□□□□ -0.62
SSBP1-207ENST00000468267 HIGD1CA8MV81 97 aa11.16□□□□□ -0.62
SSBP1-207ENST00000468267 USP17L23D6RBM5 183 aa11.16□□□□□ -0.62
SSBP1-207ENST00000468267 HLA-DQA1P01909 254 aa11.16□□□□□ -0.62
SSBP1-207ENST00000468267 AMTP48728 403 aa11.16□□□□□ -0.62
SSBP1-207ENST00000468267 TMEM241Q24JQ0 296 aa11.16□□□□□ -0.62
SSBP1-207ENST00000468267 FAM74A3Q4VXF1 159 aa11.16□□□□□ -0.62
SSBP1-207ENST00000468267 FAM229AH3BQW9 127 aa11.15□□□□□ -0.62
SSBP1-207ENST00000468267 UBE2L6O14933 153 aa11.15□□□□□ -0.62
SSBP1-207ENST00000468267 FLG2Q5D862 2391 aaPredicted RBP11.14□□□□□ -0.63
SSBP1-207ENST00000468267 C9JQL5 133 aa11.14□□□□□ -0.63
SSBP1-207ENST00000468267 NCR2O95944 276 aa11.14□□□□□ -0.63
SSBP1-207ENST00000468267 ISOC2Q96AB3 205 aa11.14□□□□□ -0.63
SSBP1-207ENST00000468267 V9GYV3 84 aa11.14□□□□□ -0.63
SSBP1-207ENST00000468267 MYCBP2O75592 4640 aa11.13□□□□□ -0.63
SSBP1-207ENST00000468267 TRAV8-4A0A0B4J246 113 aa11.13□□□□□ -0.63
SSBP1-207ENST00000468267 SDHAF1A6NFY7 115 aa11.13□□□□□ -0.63
SSBP1-207ENST00000468267 INAFM2P0DMQ5 153 aa11.13□□□□□ -0.63
SSBP1-207ENST00000468267 TMEM191AQ9H0A3 160 aa11.13□□□□□ -0.63
SSBP1-207ENST00000468267 IGLV10-54A0A075B6I4 117 aa11.12□□□□□ -0.63
SSBP1-207ENST00000468267 TRBV6-5A0A0K0K1A5 114 aa11.12□□□□□ -0.63
SSBP1-207ENST00000468267 PRSS1P07477 247 aa11.12□□□□□ -0.63
SSBP1-207ENST00000468267 RPL23P62829 140 aaKnown RBP11.12□□□□□ -0.63
SSBP1-207ENST00000468267 SRSF3P84103 164 aaKnown RBP11.12□□□□□ -0.63
SSBP1-207ENST00000468267 PEA15Q15121 130 aa11.12□□□□□ -0.63
SSBP1-207ENST00000468267 SMDT1Q9H4I9 107 aa11.12□□□□□ -0.63
SSBP1-207ENST00000468267 GAS8-AS1O95177 125 aa11.11□□□□□ -0.63
SSBP1-207ENST00000468267 NUP35Q8NFH5 326 aa11.11□□□□□ -0.63
SSBP1-207ENST00000468267 NAT8Q9UHE5 227 aa11.11□□□□□ -0.63
SSBP1-207ENST00000468267 DMBT1Q9UGM3 2413 aaPredicted RBP11.11□□□□□ -0.63
SSBP1-207ENST00000468267 I3L3M4 83 aa11.1□□□□□ -0.63
SSBP1-207ENST00000468267 APCSP02743 223 aa11.1□□□□□ -0.63
SSBP1-207ENST00000468267 RAB4AP20338 218 aa11.1□□□□□ -0.63
SSBP1-207ENST00000468267 PMCHP20382 165 aa11.1□□□□□ -0.63
SSBP1-207ENST00000468267 RIGQ13278 110 aa11.1□□□□□ -0.63
SSBP1-207ENST00000468267 ADIRFQ15847 76 aa11.1□□□□□ -0.63
SSBP1-207ENST00000468267 DGAT2L7PQ6IED9 249 aa11.1□□□□□ -0.63
SSBP1-207ENST00000468267 RNF185Q96GF1 192 aa11.1□□□□□ -0.63
SSBP1-207ENST00000468267 H7C423 109 aa11.09□□□□□ -0.63
SSBP1-207ENST00000468267 CLRN3Q8NCR9 226 aa11.09□□□□□ -0.63
SSBP1-207ENST00000468267 MRAP2Q96G30 205 aa11.09□□□□□ -0.63
SSBP1-207ENST00000468267 CHAC1Q9BUX1 264 aa11.09□□□□□ -0.63
SSBP1-207ENST00000468267 ST20Q9HBF5 79 aa11.09□□□□□ -0.63
SSBP1-207ENST00000468267 NAT8BQ9UHF3 227 aa11.09□□□□□ -0.63
SSBP1-207ENST00000468267 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.08□□□□□ -0.64
SSBP1-207ENST00000468267 IGKV2-29A2NJV5 120 aaPredicted RBP11.08□□□□□ -0.64
SSBP1-207ENST00000468267 AMMECR1LQ6DCA0 310 aa11.08□□□□□ -0.64
SSBP1-207ENST00000468267 SCXQ7RTU7 201 aa11.08□□□□□ -0.64
SSBP1-207ENST00000468267 RPS10P46783 165 aaKnown RBP11.07□□□□□ -0.64
SSBP1-207ENST00000468267 POLR2KP53803 58 aaKnown RBP11.07□□□□□ -0.64
SSBP1-207ENST00000468267 AMN1Q8IY45 258 aa11.07□□□□□ -0.64
SSBP1-207ENST00000468267 HERC1Q15751 4861 aa11.07□□□□□ -0.64
SSBP1-207ENST00000468267 SMIM27A0A1W2PRY6 76 aa11.06□□□□□ -0.64
SSBP1-207ENST00000468267 TSHBP01222 138 aa11.06□□□□□ -0.64
SSBP1-207ENST00000468267 FGF6P10767 208 aa11.06□□□□□ -0.64
SSBP1-207ENST00000468267 RNASEKQ6P5S7 137 aaKnown RBP11.06□□□□□ -0.64
SSBP1-207ENST00000468267 LINC00528Q8N1L1 170 aa11.06□□□□□ -0.64
SSBP1-207ENST00000468267 C9orf163Q8N9P6 203 aa11.06□□□□□ -0.64
SSBP1-207ENST00000468267 TRBV27A0A0K0K1C4 114 aa11.05□□□□□ -0.64
SSBP1-207ENST00000468267 ESDP10768 282 aa11.05□□□□□ -0.64
SSBP1-207ENST00000468267 CIRBP-AS1Q8TBR5 109 aa11.05□□□□□ -0.64
SSBP1-207ENST00000468267 IGKV3OR2-268A0A0C4DH90 116 aa11.04□□□□□ -0.64
SSBP1-207ENST00000468267 PLA2G1BP04054 148 aaKnown RBP11.04□□□□□ -0.64
SSBP1-207ENST00000468267 ZNF25P17030 456 aaPredicted RBP11.04□□□□□ -0.64
SSBP1-207ENST00000468267 C4orf48Q5BLP8 95 aa11.04□□□□□ -0.64
SSBP1-207ENST00000468267 TMEM242Q9NWH2 141 aa11.04□□□□□ -0.64
SSBP1-207ENST00000468267 hDV102S1A0JD36 115 aa11.03□□□□□ -0.64
SSBP1-207ENST00000468267 GAGE12HA6NDE8 117 aa11.03□□□□□ -0.64
SSBP1-207ENST00000468267 SMKR1H3BMG3 65 aa11.03□□□□□ -0.64
SSBP1-207ENST00000468267 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
SSBP1-207ENST00000468267 VCYO14598 125 aa11.02□□□□□ -0.65
SSBP1-207ENST00000468267 PPP1R17O96001 155 aa11.02□□□□□ -0.65
SSBP1-207ENST00000468267 FAM104BQ5XKR9 115 aa11.02□□□□□ -0.65
SSBP1-207ENST00000468267 NRACQ8N912 160 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms