RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 UBE2L5PA0A1B0GUS4 154 aa0.77□□□□□ -2.29
SMC4-208ENST00000467468 FAM24AA6NFZ4 105 aa0.77□□□□□ -2.29
SMC4-208ENST00000467468 UBE2L3P68036 154 aaKnown RBP0.77□□□□□ -2.29
SMC4-208ENST00000467468 SVBPQ8N300 66 aa0.77□□□□□ -2.29
SMC4-208ENST00000467468 DPH3P1Q9H4G8 78 aa0.77□□□□□ -2.29
SMC4-208ENST00000467468 PROK2Q9HC23 129 aa0.77□□□□□ -2.29
SMC4-208ENST00000467468 TENM3Q9P273 2699 aa0.77□□□□□ -2.29
SMC4-208ENST00000467468 ABCA1O95477 2261 aa0.76□□□□□ -2.29
SMC4-208ENST00000467468 ROBO1Q9Y6N7 1651 aa0.76□□□□□ -2.29
SMC4-208ENST00000467468 LAMC3Q9Y6N6 1575 aa0.76□□□□□ -2.29
SMC4-208ENST00000467468 PZPP20742 1482 aa0.76□□□□□ -2.29
SMC4-208ENST00000467468 MRC1P22897 1456 aa0.76□□□□□ -2.29
SMC4-208ENST00000467468 GOLGA3Q08378 1498 aa0.76□□□□□ -2.29
SMC4-208ENST00000467468 TRBV7-3A0A075B6L6 115 aa0.76□□□□□ -2.29
SMC4-208ENST00000467468 GCHFRP30047 84 aa0.76□□□□□ -2.29
SMC4-208ENST00000467468 SPAG11BQ08648 103 aa0.76□□□□□ -2.29
SMC4-208ENST00000467468 SPAG11AQ6PDA7 123 aa0.76□□□□□ -2.29
SMC4-208ENST00000467468 LINC00474Q9P2X8 69 aa0.76□□□□□ -2.29
SMC4-208ENST00000467468 MED13LQ71F56 2210 aa0.76□□□□□ -2.29
SMC4-208ENST00000467468 DOCK1Q14185 1865 aa0.75□□□□□ -2.29
SMC4-208ENST00000467468 MAPKBP1O60336 1514 aa0.75□□□□□ -2.29
SMC4-208ENST00000467468 C20orf202A1L168 122 aa0.75□□□□□ -2.29
SMC4-208ENST00000467468 G3V318 75 aa0.75□□□□□ -2.29
SMC4-208ENST00000467468 IFITM1P13164 125 aa0.75□□□□□ -2.29
SMC4-208ENST00000467468 ATP5EP56381 51 aaPredicted RBP0.75□□□□□ -2.29
SMC4-208ENST00000467468 MGST2Q99735 147 aa0.75□□□□□ -2.29
SMC4-208ENST00000467468 M0R135 149 aa0.74□□□□□ -2.29
SMC4-208ENST00000467468 NMBP08949 121 aa0.74□□□□□ -2.29
SMC4-208ENST00000467468 MYOZ3Q8TDC0 251 aa0.74□□□□□ -2.29
SMC4-208ENST00000467468 TSLPQ969D9 159 aa0.74□□□□□ -2.29
SMC4-208ENST00000467468 NDUFA4L2Q9NRX3 87 aa0.74□□□□□ -2.29
SMC4-208ENST00000467468 PRDM2Q13029 1718 aa0.74□□□□□ -2.29
SMC4-208ENST00000467468 ZNF462Q96JM2 2506 aa0.74□□□□□ -2.29
SMC4-208ENST00000467468 C10orf71Q711Q0 1435 aa0.73□□□□□ -2.29
SMC4-208ENST00000467468 IFT172Q9UG01 1749 aa0.73□□□□□ -2.29
SMC4-208ENST00000467468 DCDP81605 110 aaKnown RBP0.73□□□□□ -2.29
SMC4-208ENST00000467468 DYNLRB1Q9NP97 96 aa0.73□□□□□ -2.29
SMC4-208ENST00000467468 V9GYH0 126 aa0.73□□□□□ -2.29
SMC4-208ENST00000467468 NRKQ7Z2Y5 1582 aa0.73□□□□□ -2.29
SMC4-208ENST00000467468 KCPQ6ZWJ8 1503 aa0.73□□□□□ -2.29
SMC4-208ENST00000467468 PIN1P1O15428 100 aa0.72□□□□□ -2.29
SMC4-208ENST00000467468 CFAP126Q5VTH2 177 aa0.72□□□□□ -2.29
SMC4-208ENST00000467468 GTF2H5Q6ZYL4 71 aa0.72□□□□□ -2.29
SMC4-208ENST00000467468 TCEAL7Q9BRU2 100 aa0.72□□□□□ -2.29
SMC4-208ENST00000467468 SHROOM2Q13796 1616 aa0.71□□□□□ -2.3
SMC4-208ENST00000467468 MEGF8Q7Z7M0 2845 aa0.71□□□□□ -2.3
SMC4-208ENST00000467468 PRH1P02810 166 aa0.71□□□□□ -2.3
SMC4-208ENST00000467468 HSD52Q0P140 79 aa0.71□□□□□ -2.3
SMC4-208ENST00000467468 C14orf144Q96I85 54 aa0.71□□□□□ -2.3
SMC4-208ENST00000467468 AMELXQ99217 191 aa0.71□□□□□ -2.3
SMC4-208ENST00000467468 MYH8P13535 1937 aa0.71□□□□□ -2.3
SMC4-208ENST00000467468 FRAS1Q86XX4 4008 aa0.71□□□□□ -2.3
SMC4-208ENST00000467468 F5P12259 2224 aa0.7□□□□□ -2.3
SMC4-208ENST00000467468 CTXND1A0A1B0GTU2 59 aa0.7□□□□□ -2.3
SMC4-208ENST00000467468 SPINK8P0C7L1 97 aa0.7□□□□□ -2.3
SMC4-208ENST00000467468 SMIM4Q8WVI0 70 aa0.7□□□□□ -2.3
SMC4-208ENST00000467468 C12orf57Q99622 126 aa0.7□□□□□ -2.3
SMC4-208ENST00000467468 DOCK2Q92608 1830 aa0.7□□□□□ -2.3
SMC4-208ENST00000467468 UNC13BO14795 1591 aa0.7□□□□□ -2.3
SMC4-208ENST00000467468 AHNAK2Q8IVF2 5795 aa0.7□□□□□ -2.3
SMC4-208ENST00000467468 LOC285095A0A1B0GVY8 99 aa0.69□□□□□ -2.3
SMC4-208ENST00000467468 H3BQ15 152 aa0.69□□□□□ -2.3
SMC4-208ENST00000467468 HMGN4O00479 90 aa0.69□□□□□ -2.3
SMC4-208ENST00000467468 SCAPERQ9BY12 1400 aa0.69□□□□□ -2.3
SMC4-208ENST00000467468 F8VRH5 84 aa0.68□□□□□ -2.3
SMC4-208ENST00000467468 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
SMC4-208ENST00000467468 GNG11P61952 73 aa0.68□□□□□ -2.3
SMC4-208ENST00000467468 UBE2DNLQ8IWF7 75 aa0.68□□□□□ -2.3
SMC4-208ENST00000467468 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
SMC4-208ENST00000467468 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
SMC4-208ENST00000467468 ZNF609O15014 1411 aa0.67□□□□□ -2.3
SMC4-208ENST00000467468 IGLC7A0M8Q6 106 aa0.67□□□□□ -2.3
SMC4-208ENST00000467468 TMEM262E9PQX1 116 aa0.67□□□□□ -2.3
SMC4-208ENST00000467468 UQCR11O14957 56 aa0.67□□□□□ -2.3
SMC4-208ENST00000467468 COX6A2Q02221 97 aa0.67□□□□□ -2.3
SMC4-208ENST00000467468 BAGE2Q86Y30 109 aa0.67□□□□□ -2.3
SMC4-208ENST00000467468 SMR3AQ99954 134 aa0.67□□□□□ -2.3
SMC4-208ENST00000467468 ZFYVE16Q7Z3T8 1539 aa0.67□□□□□ -2.3
SMC4-208ENST00000467468 ATP6V1G2-DDX39BF2Z307 99 aa0.66□□□□□ -2.3
SMC4-208ENST00000467468 CHKB-CPT1BH3BT56 60 aa0.66□□□□□ -2.3
SMC4-208ENST00000467468 FAM167A-AS1Q96KT0 104 aa0.66□□□□□ -2.3
SMC4-208ENST00000467468 NPVFQ9HCQ7 196 aa0.66□□□□□ -2.3
SMC4-208ENST00000467468 CDC42SE2Q9NRR3 84 aa0.66□□□□□ -2.3
SMC4-208ENST00000467468 LINC01558Q9Y6Z2 57 aa0.66□□□□□ -2.3
SMC4-208ENST00000467468 ARHGAP5Q13017 1502 aa0.65□□□□□ -2.31
SMC4-208ENST00000467468 SPHKAPQ2M3C7 1700 aa0.65□□□□□ -2.31
SMC4-208ENST00000467468 ZNF815PA8K554 130 aa0.65□□□□□ -2.31
SMC4-208ENST00000467468 COX17Q14061 63 aa0.65□□□□□ -2.31
SMC4-208ENST00000467468 TMEM170BQ5T4T1 132 aa0.65□□□□□ -2.31
SMC4-208ENST00000467468 SSBP3-AS1Q7Z2R9 100 aa0.65□□□□□ -2.31
SMC4-208ENST00000467468 UQCR10Q9UDW1 63 aa0.65□□□□□ -2.31
SMC4-208ENST00000467468 JMJD1CQ15652 2540 aa0.64□□□□□ -2.31
SMC4-208ENST00000467468 TMEM218A2RU14 115 aa0.64□□□□□ -2.31
SMC4-208ENST00000467468 NAP1L6A6NFF2 107 aa0.64□□□□□ -2.31
SMC4-208ENST00000467468 RBP2P50120 134 aa0.64□□□□□ -2.31
SMC4-208ENST00000467468 SPINK6Q6UWN8 80 aa0.64□□□□□ -2.31
SMC4-208ENST00000467468 FAM213BQ8TBF2 198 aa0.64□□□□□ -2.31
SMC4-208ENST00000467468 LINC00472Q9H8W2 130 aa0.64□□□□□ -2.31
SMC4-208ENST00000467468 MYOM1P52179 1685 aa0.64□□□□□ -2.31
SMC4-208ENST00000467468 DOCK11Q5JSL3 2073 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms