RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 KRTAP10-8P60410 259 aa10.81□□□□□ -0.68
HMGN1-210ENST00000464078 RPS20P60866 119 aaKnown RBP10.81□□□□□ -0.68
HMGN1-210ENST00000464078 FAM213BQ8TBF2 198 aa10.81□□□□□ -0.68
HMGN1-210ENST00000464078 GTSF1Q8WW33 167 aa10.81□□□□□ -0.68
HMGN1-210ENST00000464078 TPPP3Q9BW30 176 aa10.81□□□□□ -0.68
HMGN1-210ENST00000464078 IGKV2-24A0A0C4DH68 120 aa10.8□□□□□ -0.68
HMGN1-210ENST00000464078 COTL1Q14019 142 aa10.8□□□□□ -0.68
HMGN1-210ENST00000464078 ODF1Q14990 250 aa10.8□□□□□ -0.68
HMGN1-210ENST00000464078 STPG4Q8N801 248 aa10.8□□□□□ -0.68
HMGN1-210ENST00000464078 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
HMGN1-210ENST00000464078 A0A1B0GV50 99 aa10.79□□□□□ -0.68
HMGN1-210ENST00000464078 F2Z2F3 143 aa10.79□□□□□ -0.68
HMGN1-210ENST00000464078 TRGC1P0CF51 173 aa10.79□□□□□ -0.68
HMGN1-210ENST00000464078 REG3GQ6UW15 175 aa10.79□□□□□ -0.68
HMGN1-210ENST00000464078 SPINK6Q6UWN8 80 aa10.79□□□□□ -0.68
HMGN1-210ENST00000464078 KCNRGQ8N5I3 272 aa10.79□□□□□ -0.68
HMGN1-210ENST00000464078 OR2D3Q8NGH3 330 aa10.79□□□□□ -0.68
HMGN1-210ENST00000464078 A0A096LNI7 61 aa10.78□□□□□ -0.68
HMGN1-210ENST00000464078 C19orf71A6NCJ1 209 aa10.78□□□□□ -0.68
HMGN1-210ENST00000464078 ZNF345Q14585 488 aa10.78□□□□□ -0.68
HMGN1-210ENST00000464078 HIGD2BQ4VC39 106 aa10.78□□□□□ -0.68
HMGN1-210ENST00000464078 LINC00474Q9P2X8 69 aa10.78□□□□□ -0.68
HMGN1-210ENST00000464078 CENPWQ5EE01 88 aa10.77□□□□□ -0.69
HMGN1-210ENST00000464078 CHCHD10Q8WYQ3 142 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-210ENST00000464078 SMIM12Q96EX1 92 aa10.77□□□□□ -0.69
HMGN1-210ENST00000464078 PKIGQ9Y2B9 76 aa10.77□□□□□ -0.69
HMGN1-210ENST00000464078 XKRY2A2RUG3 117 aa10.76□□□□□ -0.69
HMGN1-210ENST00000464078 H2AFB1P0C5Y9 115 aa10.76□□□□□ -0.69
HMGN1-210ENST00000464078 CTRLP40313 264 aa10.75□□□□□ -0.69
HMGN1-210ENST00000464078 LYPD6BQ8NI32 183 aa10.75□□□□□ -0.69
HMGN1-210ENST00000464078 MANBALQ9NQG1 85 aa10.75□□□□□ -0.69
HMGN1-210ENST00000464078 IGKV3OR2-268A0A0C4DH90 116 aa10.74□□□□□ -0.69
HMGN1-210ENST00000464078 H7C423 109 aa10.74□□□□□ -0.69
HMGN1-210ENST00000464078 NTF3P20783 257 aa10.74□□□□□ -0.69
HMGN1-210ENST00000464078 SRSF9Q13242 221 aaKnown RBP eCLIP10.74□□□□□ -0.69
HMGN1-210ENST00000464078 LYZL1Q6UWQ5 148 aa10.74□□□□□ -0.69
HMGN1-210ENST00000464078 CNFNQ9BYD5 112 aa10.74□□□□□ -0.69
HMGN1-210ENST00000464078 NCR2O95944 276 aa10.73□□□□□ -0.69
HMGN1-210ENST00000464078 IFNA1P01562 189 aa10.73□□□□□ -0.69
HMGN1-210ENST00000464078 FOXI1Q12951 378 aa10.73□□□□□ -0.69
HMGN1-210ENST00000464078 AMMECR1LQ6DCA0 310 aa10.73□□□□□ -0.69
HMGN1-210ENST00000464078 C9orf62Q8N4C0 152 aa10.73□□□□□ -0.69
HMGN1-210ENST00000464078 GNG4P50150 75 aa10.72□□□□□ -0.69
HMGN1-210ENST00000464078 CCL20P78556 96 aa10.72□□□□□ -0.69
HMGN1-210ENST00000464078 Q6ZRP5 223 aa10.72□□□□□ -0.69
HMGN1-210ENST00000464078 TRAV1-1A0A0B4J248 108 aa10.71□□□□□ -0.69
HMGN1-210ENST00000464078 Q6ZNX1 250 aa10.71□□□□□ -0.69
HMGN1-210ENST00000464078 GATD1Q8NB37 220 aa10.71□□□□□ -0.69
HMGN1-210ENST00000464078 GNG13Q9P2W3 67 aa10.71□□□□□ -0.69
HMGN1-210ENST00000464078 TRBV20OR9-2A0A075B6H5 130 aa10.7□□□□□ -0.7
HMGN1-210ENST00000464078 FGF6P10767 208 aa10.7□□□□□ -0.7
HMGN1-210ENST00000464078 ZNF25P17030 456 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-210ENST00000464078 HMSDA8MTL9 139 aa10.69□□□□□ -0.7
HMGN1-210ENST00000464078 SMLR1H3BR10 107 aa10.69□□□□□ -0.7
HMGN1-210ENST00000464078 BCL2L11O43521 198 aa10.69□□□□□ -0.7
HMGN1-210ENST00000464078 APCSP02743 223 aa10.69□□□□□ -0.7
HMGN1-210ENST00000464078 RNASEKQ6P5S7 137 aaKnown RBP10.69□□□□□ -0.7
HMGN1-210ENST00000464078 OR5A1Q8NGJ0 315 aa10.69□□□□□ -0.7
HMGN1-210ENST00000464078 CARD19Q96LW7 228 aa10.69□□□□□ -0.7
HMGN1-210ENST00000464078 BIN3Q9NQY0 253 aa10.69□□□□□ -0.7
HMGN1-210ENST00000464078 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-210ENST00000464078 TRAV26-2A0A0B4J265 109 aa10.68□□□□□ -0.7
HMGN1-210ENST00000464078 IGHV1-58A0A0C4DH39 117 aa10.68□□□□□ -0.7
HMGN1-210ENST00000464078 IGKV2-29A2NJV5 120 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-210ENST00000464078 RAB19A4D1S5 217 aa10.68□□□□□ -0.7
HMGN1-210ENST00000464078 GAS8-AS1O95177 125 aa10.68□□□□□ -0.7
HMGN1-210ENST00000464078 KANTRA0A1W2PQU2 76 aa10.67□□□□□ -0.7
HMGN1-210ENST00000464078 PDE6DO43924 150 aa10.67□□□□□ -0.7
HMGN1-210ENST00000464078 XCL1P47992 114 aa10.67□□□□□ -0.7
HMGN1-210ENST00000464078 EIF5AP63241 154 aaKnown RBP10.67□□□□□ -0.7
HMGN1-210ENST00000464078 MEF2BQ02080 365 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-210ENST00000464078 TWIST1Q15672 202 aa10.67□□□□□ -0.7
HMGN1-210ENST00000464078 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
HMGN1-210ENST00000464078 SDHAF1A6NFY7 115 aa10.66□□□□□ -0.7
HMGN1-210ENST00000464078 TEX261Q6UWH6 196 aa10.66□□□□□ -0.7
HMGN1-210ENST00000464078 LINC00959A0A1B0GUT2 108 aa10.65□□□□□ -0.7
HMGN1-210ENST00000464078 CCL25O15444 150 aa10.65□□□□□ -0.7
HMGN1-210ENST00000464078 SYCNQ0VAF6 134 aa10.65□□□□□ -0.7
HMGN1-210ENST00000464078 NUDT10Q8NFP7 164 aa10.65□□□□□ -0.7
HMGN1-210ENST00000464078 LINC00526Q96FQ7 95 aa10.65□□□□□ -0.7
HMGN1-210ENST00000464078 NUDT11Q96G61 164 aa10.65□□□□□ -0.7
HMGN1-210ENST00000464078 BATF3Q9NR55 127 aa10.65□□□□□ -0.7
HMGN1-210ENST00000464078 PTTG1IPP53801 180 aa10.64□□□□□ -0.71
HMGN1-210ENST00000464078 BTF3L4Q96K17 158 aa10.64□□□□□ -0.71
HMGN1-210ENST00000464078 TRBV6-5A0A0K0K1A5 114 aa10.63□□□□□ -0.71
HMGN1-210ENST00000464078 FAM231BA6NCW3 169 aa10.63□□□□□ -0.71
HMGN1-210ENST00000464078 TEX46H3BTG2 121 aa10.63□□□□□ -0.71
HMGN1-210ENST00000464078 TMEM101Q96IK0 257 aa10.63□□□□□ -0.71
HMGN1-210ENST00000464078 FAM210AQ96ND0 272 aa10.63□□□□□ -0.71
HMGN1-210ENST00000464078 RPP21Q9H633 154 aaKnown RBP10.63□□□□□ -0.71
HMGN1-210ENST00000464078 I3L3M4 83 aa10.62□□□□□ -0.71
HMGN1-210ENST00000464078 ZNF561-AS1K7EIQ3 104 aa10.62□□□□□ -0.71
HMGN1-210ENST00000464078 ESDP10768 282 aa10.62□□□□□ -0.71
HMGN1-210ENST00000464078 CD164L2Q6UWJ8 174 aa10.62□□□□□ -0.71
HMGN1-210ENST00000464078 MED9Q9NWA0 146 aa10.62□□□□□ -0.71
HMGN1-210ENST00000464078 LOC107984640A0A0U1RRK4 108 aa10.61□□□□□ -0.71
HMGN1-210ENST00000464078 CAMPP49913 170 aa10.61□□□□□ -0.71
HMGN1-210ENST00000464078 RGS21Q2M5E4 152 aa10.61□□□□□ -0.71
HMGN1-210ENST00000464078 SMIM15Q7Z3B0 74 aa10.61□□□□□ -0.71
HMGN1-210ENST00000464078 MRPL52Q86TS9 123 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms