RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 LOC100131303A0A0U1RQF7 123 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 GATA1P15976 413 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-204ENST00000463622 EVI2AP22794 236 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 ASIPP42127 132 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 ELOBQ15370 118 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 RHEBQ15382 184 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 C12orf74Q32Q52 190 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 UFSP1Q6NVU6 142 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 SVBPQ8N300 66 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 LINC00612Q8N6U2 182 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 TMEM263Q8WUH6 116 aaKnown RBP2.48□□□□□ -2.01
SCFD1-204ENST00000463622 RNF185Q96GF1 192 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 IMMP2LQ96T52 175 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 C20orf144Q9BQM9 153 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 KIF25-AS1Q9Y6Z4 181 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 MYCBP2O75592 4640 aa2.48□□□□□ -2.01
SCFD1-204ENST00000463622 FAT1Q14517 4588 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 TRGV1A0A0A0MS02 117 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 TRAV26-2A0A0B4J265 109 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 A0A1W2PPQ1 181 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 COLCA2A8K830 154 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 SMKR1H3BMG3 65 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 SNAPINO95295 136 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 NCR2O95944 276 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 MT-ND4LP03901 98 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 CRYGDP07320 174 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 OR5AL1P0C617 328 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 INAFM2P0DMQ5 153 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 DEFB130BP0DP73 79 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 DEFB130AP0DP74 79 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 NTF3P20783 257 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 ZNF415Q09FC8 603 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 DAZ2Q13117 558 aaKnown RBP2.47□□□□□ -2.01
SCFD1-204ENST00000463622 C1orf134Q5TEV5 83 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 AMN1Q8IY45 258 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 TMEM256Q8N2U0 113 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 C15orf54Q8N8G6 183 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 DEFB104AQ8WTQ1 72 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 C16orf74Q96GX8 76 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 CNFNQ9BYD5 112 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 NACAE9PAV3 2078 aa2.47□□□□□ -2.01
SCFD1-204ENST00000463622 A8MWL6 223 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 EPM2AB3EWF7 344 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 M0R2P5 195 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 PHOX2AO14813 284 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 RS1O15537 224 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 MIFP14174 115 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 S100A4P26447 101 aaKnown RBP2.46□□□□□ -2.02
SCFD1-204ENST00000463622 RPS10P46783 165 aaKnown RBP2.46□□□□□ -2.02
SCFD1-204ENST00000463622 CAMPP49913 170 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 SLAQ13239 276 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 CFAP126Q5VTH2 177 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 TMEM136Q6ZRR5 245 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 C14orf178Q8N769 122 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-204ENST00000463622 KCNS1Q96KK3 526 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 NAT8BQ9UHF3 227 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 HMCN2Q8NDA2 5059 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 A0A1B0GUT8 65 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 SMIM9A6NGZ8 99 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 SNURFLB1AK76 121 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 F2Z2F3 143 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 PPP1R2P9O14990 202 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 S100A1P23297 94 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 RPS20P60866 119 aaKnown RBP2.46□□□□□ -2.02
SCFD1-204ENST00000463622 FAM74A4Q5TZK3 123 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 SPANXN1Q5VSR9 72 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 ZNF493Q6ZR52 646 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 GATD1Q8NB37 220 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 RASL10AQ92737 203 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 RPL39LQ96EH5 51 aaKnown RBP2.46□□□□□ -2.02
SCFD1-204ENST00000463622 VSIG2Q96IQ7 327 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 BIN3Q9NQY0 253 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 TMEM242Q9NWH2 141 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 PHLDA3Q9Y5J5 127 aa2.46□□□□□ -2.02
SCFD1-204ENST00000463622 IGLV2-18A0A075B6J9 118 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 TRBV24-1A0A075B6N3 115 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 DEFB131BA0A096LNP1 70 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 IGLV9-49A0A0B4J1Y8 123 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 A0A0J9YY99 117 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 MGPP08493 103 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 HTN3P15516 51 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 RAB4AP20338 218 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 IQCJQ1A5X6 159 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 MRPL51Q4U2R6 128 aaKnown RBP2.45□□□□□ -2.02
SCFD1-204ENST00000463622 NEGR1Q7Z3B1 354 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 ZFP82Q8N141 532 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-204ENST00000463622 FAM210BQ96KR6 192 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 SPXQ9BT56 116 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 NDUFAF3Q9BU61 184 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 SMCO4Q9NRQ5 59 aa2.45□□□□□ -2.02
SCFD1-204ENST00000463622 FLG2Q5D862 2391 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-204ENST00000463622 TRGV2A0A075B6R0 118 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 A0A096LPF7 62 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 TRAV4A0A0B4J268 109 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 FAM231BA6NCW3 169 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 LYRM9A8MSI8 78 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 NPYP01303 97 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 LINC00694P0DN24 101 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 DAD1P61803 113 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms