RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 I3L3M4 83 aa4.13□□□□□ -1.75
NUP98-208ENST00000461047 ATP6V1G1O75348 118 aa4.13□□□□□ -1.75
NUP98-208ENST00000461047 IGKV2-30P06310 120 aa4.13□□□□□ -1.75
NUP98-208ENST00000461047 RAB5AP20339 215 aa4.13□□□□□ -1.75
NUP98-208ENST00000461047 FCER1GP30273 86 aa4.13□□□□□ -1.75
NUP98-208ENST00000461047 TIRAPP58753 221 aa4.13□□□□□ -1.75
NUP98-208ENST00000461047 LINC00315P59091 139 aa4.13□□□□□ -1.75
NUP98-208ENST00000461047 COTL1Q14019 142 aa4.13□□□□□ -1.75
NUP98-208ENST00000461047 MRPL51Q4U2R6 128 aaKnown RBP4.13□□□□□ -1.75
NUP98-208ENST00000461047 Q8N9P0 234 aaPredicted RBP4.13□□□□□ -1.75
NUP98-208ENST00000461047 PRELID3AQ96N28 172 aa4.13□□□□□ -1.75
NUP98-208ENST00000461047 KIR2DL4Q99706 377 aa4.13□□□□□ -1.75
NUP98-208ENST00000461047 GTSF1LQ9H1H1 148 aa4.13□□□□□ -1.75
NUP98-208ENST00000461047 APLNQ9ULZ1 77 aa4.13□□□□□ -1.75
NUP98-208ENST00000461047 A0A096LPF7 62 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 TRBV6-5A0A0K0K1A5 114 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 SDHAF1A6NFY7 115 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 KRTAP29-1A8MX34 341 aaPredicted RBP4.12□□□□□ -1.75
NUP98-208ENST00000461047 D6R8Y8 96 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 K7EP13 123 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 TNFRSF6BO95407 300 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 NCR2O95944 276 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 RPS10P46783 165 aaKnown RBP4.12□□□□□ -1.75
NUP98-208ENST00000461047 UBE2D3P61077 147 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 SUMO2P61956 95 aaKnown RBP4.12□□□□□ -1.75
NUP98-208ENST00000461047 UBE2D2P62837 147 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 ATRAIDQ6UW56 229 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 LYPD5Q6UWN5 251 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 NEXN-AS1Q8NBZ9 246 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 TMEM18Q96B42 140 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 RNF185Q96GF1 192 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 MAP1LC3AQ9H492 121 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 NBEAL2Q6ZNJ1 2754 aa4.12□□□□□ -1.75
NUP98-208ENST00000461047 TRBV25-1A0A075B6N4 114 aa4.11□□□□□ -1.75
NUP98-208ENST00000461047 TRAV26-2A0A0B4J265 109 aa4.11□□□□□ -1.75
NUP98-208ENST00000461047 IGHV1-24A0A0C4DH33 117 aa4.11□□□□□ -1.75
NUP98-208ENST00000461047 LOC100131303A0A0U1RQF7 123 aa4.11□□□□□ -1.75
NUP98-208ENST00000461047 K7EMI3 77 aa4.11□□□□□ -1.75
NUP98-208ENST00000461047 UBE2L6O14933 153 aa4.11□□□□□ -1.75
NUP98-208ENST00000461047 AMTP48728 403 aa4.11□□□□□ -1.75
NUP98-208ENST00000461047 RAB5BP61020 215 aa4.11□□□□□ -1.75
NUP98-208ENST00000461047 RPL32P62910 135 aaKnown RBP4.11□□□□□ -1.75
NUP98-208ENST00000461047 LELP1Q5T871 98 aa4.11□□□□□ -1.75
NUP98-208ENST00000461047 LGALS9CQ6DKI2 356 aa4.11□□□□□ -1.75
NUP98-208ENST00000461047 CBLN2Q8IUK8 224 aa4.11□□□□□ -1.75
NUP98-208ENST00000461047 PRSS3P2Q8NHM4 247 aa4.11□□□□□ -1.75
NUP98-208ENST00000461047 NXT2Q9NPJ8 142 aaKnown RBP4.11□□□□□ -1.75
NUP98-208ENST00000461047 MRPS16Q9Y3D3 137 aaKnown RBP4.11□□□□□ -1.75
NUP98-208ENST00000461047 A0A087WX48 190 aa4.1□□□□□ -1.75
NUP98-208ENST00000461047 TRBV6-8A0A0A6YYG3 113 aa4.1□□□□□ -1.75
NUP98-208ENST00000461047 TRBV27A0A0K0K1C4 114 aa4.1□□□□□ -1.75
NUP98-208ENST00000461047 LINC01549A6NIU2 74 aa4.1□□□□□ -1.75
NUP98-208ENST00000461047 TMEM262E9PQX1 116 aa4.1□□□□□ -1.75
NUP98-208ENST00000461047 H7C423 109 aa4.1□□□□□ -1.75
NUP98-208ENST00000461047 LY6G6CO95867 125 aa4.1□□□□□ -1.75
NUP98-208ENST00000461047 ESRGQ1W209 222 aa4.1□□□□□ -1.75
NUP98-208ENST00000461047 TTC32Q5I0X7 151 aa4.1□□□□□ -1.75
NUP98-208ENST00000461047 RPL39LQ96EH5 51 aaKnown RBP4.1□□□□□ -1.75
NUP98-208ENST00000461047 CHCHD5Q9BSY4 110 aa4.1□□□□□ -1.75
NUP98-208ENST00000461047 TMEM243Q9BU79 118 aa4.1□□□□□ -1.75
NUP98-208ENST00000461047 TMEM70Q9BUB7 260 aa4.1□□□□□ -1.75
NUP98-208ENST00000461047 IGHV3-38A0A0C4DH36 116 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 LOC389332A0A1B0GUA5 103 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 PRSS47A8MTI9 375 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 SMKR1H3BMG3 65 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 SIVA1O15304 175 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 NPYP01303 97 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 POLR2KP53803 58 aaKnown RBP4.09□□□□□ -1.75
NUP98-208ENST00000461047 KIAA1644Q3SXP7 199 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 ORMDL2Q53FV1 153 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 AMMECR1LQ6DCA0 310 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 DGAT2L7PQ6IED9 249 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 FA2HQ7L5A8 372 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 C10orf126Q8N4M7 172 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 NRACQ8N912 160 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 TMEM101Q96IK0 257 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 UPK3BQ9BT76 320 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 CHCHD7Q9BUK0 85 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 SMIM2Q9BVW6 85 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 Q9H8V8 135 aa4.09□□□□□ -1.75
NUP98-208ENST00000461047 COLCA2A8K830 154 aa4.08□□□□□ -1.76
NUP98-208ENST00000461047 LINC00694P0DN24 101 aa4.08□□□□□ -1.76
NUP98-208ENST00000461047 LAGE3Q14657 143 aa4.08□□□□□ -1.76
NUP98-208ENST00000461047 IQCJQ1A5X6 159 aa4.08□□□□□ -1.76
NUP98-208ENST00000461047 BAGE3Q86Y29 109 aa4.08□□□□□ -1.76
NUP98-208ENST00000461047 Q8N8P6 123 aa4.08□□□□□ -1.76
NUP98-208ENST00000461047 DNHD1Q96M86 4753 aa4.08□□□□□ -1.76
NUP98-208ENST00000461047 YPEL4Q96NS1 127 aa4.08□□□□□ -1.76
NUP98-208ENST00000461047 MUC4Q99102 2169 aa4.08□□□□□ -1.76
NUP98-208ENST00000461047 ALKBH7Q9BT30 221 aaPredicted RBP4.08□□□□□ -1.76
NUP98-208ENST00000461047 LINC00588Q9Y4M8 146 aa4.08□□□□□ -1.76
NUP98-208ENST00000461047 C1orf196B1AJZ1 125 aa4.07□□□□□ -1.76
NUP98-208ENST00000461047 SCO1O75880 301 aa4.07□□□□□ -1.76
NUP98-208ENST00000461047 TRGC2P03986 189 aa4.07□□□□□ -1.76
NUP98-208ENST00000461047 LINC00614P0C842 121 aa4.07□□□□□ -1.76
NUP98-208ENST00000461047 ZNF25P17030 456 aaPredicted RBP4.07□□□□□ -1.76
NUP98-208ENST00000461047 BTF3P20290 206 aaKnown RBP4.07□□□□□ -1.76
NUP98-208ENST00000461047 PAPPA-AS1Q5QFB9 102 aa4.07□□□□□ -1.76
NUP98-208ENST00000461047 RNASEKQ6P5S7 137 aaKnown RBP4.07□□□□□ -1.76
NUP98-208ENST00000461047 OR5A1Q8NGJ0 315 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms