RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 RNF185Q96GF1 192 aa7.26□□□□□ -1.25
UBR4-208ENST00000459947 TMEM262E9PQX1 116 aa7.26□□□□□ -1.25
UBR4-208ENST00000459947 RTL8CO15255 209 aa7.26□□□□□ -1.25
UBR4-208ENST00000459947 CKS2P33552 79 aa7.26□□□□□ -1.25
UBR4-208ENST00000459947 AMN1Q8IY45 258 aa7.26□□□□□ -1.25
UBR4-208ENST00000459947 KIR2DL4Q99706 377 aa7.26□□□□□ -1.25
UBR4-208ENST00000459947 ZNF25P17030 456 aaPredicted RBP7.25□□□□□ -1.25
UBR4-208ENST00000459947 A0A1B0GUV1 79 aa7.25□□□□□ -1.25
UBR4-208ENST00000459947 IGHV3-30P01768 117 aa7.25□□□□□ -1.25
UBR4-208ENST00000459947 IGHV3-33P01772 117 aa7.25□□□□□ -1.25
UBR4-208ENST00000459947 IGHV3-30-3P0DP02 117 aa7.25□□□□□ -1.25
UBR4-208ENST00000459947 IGHV3-30-5P0DP03 117 aa7.25□□□□□ -1.25
UBR4-208ENST00000459947 CLRN3Q8NCR9 226 aa7.25□□□□□ -1.25
UBR4-208ENST00000459947 TENM2Q9NT68 2774 aa7.25□□□□□ -1.25
UBR4-208ENST00000459947 ADCYAP1P18509 176 aa7.25□□□□□ -1.25
UBR4-208ENST00000459947 MRPL51Q4U2R6 128 aaKnown RBP7.25□□□□□ -1.25
UBR4-208ENST00000459947 ORMDL3Q8N138 153 aa7.25□□□□□ -1.25
UBR4-208ENST00000459947 MT-ND6P03923 174 aa7.24□□□□□ -1.25
UBR4-208ENST00000459947 TRBV27A0A0K0K1C4 114 aa7.24□□□□□ -1.25
UBR4-208ENST00000459947 PSCAO43653 123 aa7.24□□□□□ -1.25
UBR4-208ENST00000459947 HLA-DQA1P01909 254 aa7.24□□□□□ -1.25
UBR4-208ENST00000459947 SUMO2P61956 95 aaKnown RBP7.24□□□□□ -1.25
UBR4-208ENST00000459947 TRBV24-1A0A075B6N3 115 aa7.24□□□□□ -1.25
UBR4-208ENST00000459947 MIAQ16674 131 aa7.24□□□□□ -1.25
UBR4-208ENST00000459947 TMEM70Q9BUB7 260 aa7.24□□□□□ -1.25
UBR4-208ENST00000459947 FCER1GP30273 86 aa7.23□□□□□ -1.25
UBR4-208ENST00000459947 AMMECR1LQ6DCA0 310 aa7.23□□□□□ -1.25
UBR4-208ENST00000459947 VPS13DQ5THJ4 4388 aa7.23□□□□□ -1.25
UBR4-208ENST00000459947 C7orf77A4D0Y5 90 aa7.23□□□□□ -1.25
UBR4-208ENST00000459947 POLR2KP53803 58 aaKnown RBP7.23□□□□□ -1.25
UBR4-208ENST00000459947 TMEM101Q96IK0 257 aa7.23□□□□□ -1.25
UBR4-208ENST00000459947 KRTAP1-5Q9BYS1 174 aa7.23□□□□□ -1.25
UBR4-208ENST00000459947 K7EMI3 77 aa7.23□□□□□ -1.25
UBR4-208ENST00000459947 S100A12P80511 92 aa7.23□□□□□ -1.25
UBR4-208ENST00000459947 C14orf177Q52M58 125 aa7.23□□□□□ -1.25
UBR4-208ENST00000459947 CDPF1Q6NVV7 123 aa7.23□□□□□ -1.25
UBR4-208ENST00000459947 ATRAIDQ6UW56 229 aa7.23□□□□□ -1.25
UBR4-208ENST00000459947 RPL39LQ96EH5 51 aaKnown RBP7.23□□□□□ -1.25
UBR4-208ENST00000459947 Q9UF83 564 aa7.23□□□□□ -1.25
UBR4-208ENST00000459947 TRAV8-4A0A0B4J246 113 aa7.22□□□□□ -1.25
UBR4-208ENST00000459947 TRAV26-2A0A0B4J265 109 aa7.22□□□□□ -1.25
UBR4-208ENST00000459947 RPS10P5Q9NQ39 176 aa7.22□□□□□ -1.25
UBR4-208ENST00000459947 GAGE6Q13070 117 aa7.22□□□□□ -1.25
UBR4-208ENST00000459947 NTM-AS1Q6ZSK4 140 aa7.22□□□□□ -1.25
UBR4-208ENST00000459947 NTN5Q8WTR8 489 aaPredicted RBP7.22□□□□□ -1.25
UBR4-208ENST00000459947 C1orf43Q9BWL3 253 aa7.22□□□□□ -1.25
UBR4-208ENST00000459947 NRACQ8N912 160 aa7.21□□□□□ -1.25
UBR4-208ENST00000459947 PRELID3AQ96N28 172 aa7.21□□□□□ -1.25
UBR4-208ENST00000459947 MAP1LC3AQ9H492 121 aa7.21□□□□□ -1.25
UBR4-208ENST00000459947 ANGP03950 147 aaKnown RBP7.21□□□□□ -1.26
UBR4-208ENST00000459947 RBX1P62877 108 aa7.21□□□□□ -1.26
UBR4-208ENST00000459947 Q6ZRN7 208 aaPredicted RBP7.21□□□□□ -1.26
UBR4-208ENST00000459947 TMEM136Q6ZRR5 245 aa7.21□□□□□ -1.26
UBR4-208ENST00000459947 LINC01549A6NIU2 74 aa7.21□□□□□ -1.26
UBR4-208ENST00000459947 TNFRSF6BO95407 300 aa7.21□□□□□ -1.26
UBR4-208ENST00000459947 SMIM2Q9BVW6 85 aa7.21□□□□□ -1.26
UBR4-208ENST00000459947 GNB1LQ9BYB4 327 aa7.21□□□□□ -1.26
UBR4-208ENST00000459947 KLK12Q9UKR0 248 aa7.21□□□□□ -1.26
UBR4-208ENST00000459947 CCL25O15444 150 aa7.2□□□□□ -1.26
UBR4-208ENST00000459947 APOC3P02656 99 aa7.2□□□□□ -1.26
UBR4-208ENST00000459947 TIMM21Q9BVV7 248 aa7.2□□□□□ -1.26
UBR4-208ENST00000459947 MRPL52Q86TS9 123 aaKnown RBP7.2□□□□□ -1.26
UBR4-208ENST00000459947 D6R8Y8 96 aa7.2□□□□□ -1.26
UBR4-208ENST00000459947 UBE2WQ96B02 151 aa7.2□□□□□ -1.26
UBR4-208ENST00000459947 ESDP10768 282 aa7.19□□□□□ -1.26
UBR4-208ENST00000459947 PGPEP1Q9NXJ5 209 aa7.19□□□□□ -1.26
UBR4-208ENST00000459947 CSMD3Q7Z407 3707 aa7.19□□□□□ -1.26
UBR4-208ENST00000459947 TSHBP01222 138 aa7.19□□□□□ -1.26
UBR4-208ENST00000459947 RNF151Q2KHN1 245 aa7.19□□□□□ -1.26
UBR4-208ENST00000459947 MPV17L2Q567V2 206 aa7.19□□□□□ -1.26
UBR4-208ENST00000459947 Q9HAA7 133 aa7.19□□□□□ -1.26
UBR4-208ENST00000459947 PRR34Q9NV39 138 aa7.19□□□□□ -1.26
UBR4-208ENST00000459947 SACSQ9NZJ4 4579 aa7.19□□□□□ -1.26
UBR4-208ENST00000459947 RAB5AP20339 215 aa7.19□□□□□ -1.26
UBR4-208ENST00000459947 OR5A1Q8NGJ0 315 aa7.19□□□□□ -1.26
UBR4-208ENST00000459947 NXT2Q9NPJ8 142 aaKnown RBP7.19□□□□□ -1.26
UBR4-208ENST00000459947 RYR2Q92736 4967 aa7.18□□□□□ -1.26
UBR4-208ENST00000459947 LOC105371267A0A1B0GV96 52 aa7.18□□□□□ -1.26
UBR4-208ENST00000459947 A0A1B0GVY2 172 aa7.18□□□□□ -1.26
UBR4-208ENST00000459947 DGAT2L7PQ6IED9 249 aa7.18□□□□□ -1.26
UBR4-208ENST00000459947 CSDC2Q9Y534 153 aaKnown RBP7.18□□□□□ -1.26
UBR4-208ENST00000459947 IGKV2D-24A0A075B6R9 120 aa7.18□□□□□ -1.26
UBR4-208ENST00000459947 TNP2Q05952 138 aa7.18□□□□□ -1.26
UBR4-208ENST00000459947 Q8N976 141 aa7.18□□□□□ -1.26
UBR4-208ENST00000459947 FGF6P10767 208 aa7.17□□□□□ -1.26
UBR4-208ENST00000459947 RPS10P46783 165 aaKnown RBP7.17□□□□□ -1.26
UBR4-208ENST00000459947 SPANXA1Q9NS26 97 aa7.17□□□□□ -1.26
UBR4-208ENST00000459947 A0A087WTM6 91 aa7.17□□□□□ -1.26
UBR4-208ENST00000459947 SMKR1H3BMG3 65 aa7.17□□□□□ -1.26
UBR4-208ENST00000459947 NPSP0C0P6 89 aa7.17□□□□□ -1.26
UBR4-208ENST00000459947 ORMDL2Q53FV1 153 aa7.17□□□□□ -1.26
UBR4-208ENST00000459947 RNASEKQ6P5S7 137 aaKnown RBP7.17□□□□□ -1.26
UBR4-208ENST00000459947 CFAP161Q6P656 301 aa7.17□□□□□ -1.26
UBR4-208ENST00000459947 REG3AQ06141 175 aa7.17□□□□□ -1.26
UBR4-208ENST00000459947 Q8N8P6 123 aa7.17□□□□□ -1.26
UBR4-208ENST00000459947 NPYP01303 97 aa7.16□□□□□ -1.26
UBR4-208ENST00000459947 SMCO4Q9NRQ5 59 aa7.16□□□□□ -1.26
UBR4-208ENST00000459947 C20orf203Q8NBC4 194 aa7.15□□□□□ -1.26
UBR4-208ENST00000459947 CTAG1AP78358 180 aa7.15□□□□□ -1.26
UBR4-208ENST00000459947 PKIGQ9Y2B9 76 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms