RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 BTF3L4Q96K17 158 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 WFDC10AQ9H1F0 79 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 PRO1933Q9H354 126 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 EDA2RQ9HAV5 297 aa3.69□□□□□ -1.82
HMGB1P4-201ENST00000455362 IGHV3OR16-9A0A0B4J2B5 98 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 GRIFINA4D1Z8 144 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 HIGD1CA8MV81 97 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 GNRH2O43555 120 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 SPINK4O60575 86 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 AMBPP02760 352 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 GIG44P09565 113 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 IGLC6P0CF74 106 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 FXYD7P58549 80 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 FABP9Q0Z7S8 132 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 TDRG1Q3Y452 100 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 COA6Q5JTJ3 125 aaKnown RBP3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 LYZL1Q6UWQ5 148 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 LINC00173Q6ZV60 143 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 GTSCR1Q86UQ5 136 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 NAT8BQ9UHF3 227 aa3.68□□□□□ -1.82
HMGB1P4-201ENST00000455362 TENM3Q9P273 2699 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 IGLV8-61A0A075B6I0 122 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 A0A1B0GUT8 65 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 A0A1B0GXF2 115 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 F2Z2F3 143 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 CCL25O15444 150 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 RPS10P46783 165 aaKnown RBP3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 CRYBA4P53673 196 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 KRTAP10-11P60412 298 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 CXCL6P80162 114 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 EGFEM1PQ0D2K5 195 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 RBMY1FQ15415 496 aaKnown RBP3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 TTC32Q5I0X7 151 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 MRPL54Q6P161 138 aaKnown RBP3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 FER1L6-AS1Q8NA97 138 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 KCNS1Q96KK3 526 aa3.67□□□□□ -1.82
HMGB1P4-201ENST00000455362 MUC21A0A0G2JKD1 596 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 MUC21A0A140T8X8 626 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 PHOX2AO14813 284 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 INSP01308 110 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 ARMS2P0C7Q2 107 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 RNASE3P12724 160 aaKnown RBP3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 CTRLP40313 264 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 ASIPP42127 132 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 PSMB2P49721 201 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 NANOS2P60321 138 aaKnown RBP3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 PRR3P79522 188 aaKnown RBP3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 REG3AQ06141 175 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 MORN3Q6PF18 240 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 RASL11AQ6T310 242 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 ZNF493Q6ZR52 646 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 TMEM136Q6ZRR5 245 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 NOTCH2NLQ7Z3S9 236 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 ATP5L2Q7Z4Y8 100 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 FAM19A5Q7Z5A7 132 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 C1orf158Q8N1D5 194 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 LINC01587Q99440 93 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 LINC00467Q9BRT7 94 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 GNB1LQ9BYB4 327 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 CNFNQ9BYD5 112 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 MAP1LC3AQ9H492 121 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 SCRT2Q9NQ03 307 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 MDFICQ9P1T7 246 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 TP53TG3Q9ULZ0 132 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 TP53TG1Q9Y2A0 90 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 NACAE9PAV3 2078 aa3.66□□□□□ -1.82
HMGB1P4-201ENST00000455362 TRAV8-6A0A0B4J262 113 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 H0Y9J4 135 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 H3BVH4 76 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 TRGC2P03986 189 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 PRM2P04554 102 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 HTN1P15515 57 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 NTF3P20783 257 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 S100A4P26447 101 aaKnown RBP3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 RIPPLY3P57055 190 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 RAB5BP61020 215 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 HBBP68871 147 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 C4orf26Q17RF5 130 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 TMEM256Q8N2U0 113 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 C11orf72Q8NBR9 251 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 OR10AG1Q8NH19 301 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 BORCS7Q96B45 105 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 TRAPPC1Q9Y5R8 145 aa3.65□□□□□ -1.83
HMGB1P4-201ENST00000455362 STAB2Q8WWQ8 2551 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 DNHD1Q96M86 4753 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 LOC102724200A0A096LPH7 203 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 C1orf196B1AJZ1 125 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 HLA-DQA1P01909 254 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 APCSP02743 223 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 MT-ND6P03923 174 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 CHTF8P0CG12 524 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 AZU1P20160 251 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 RPL36AP83881 106 aaKnown RBP3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 SPANXN1Q5VSR9 72 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 ZNF705AQ6ZN79 300 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 ZNF664Q8N3J9 261 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 GATD1Q8NB37 220 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 FRZBQ92765 325 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 RNF185Q96GF1 192 aa3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 PHLDA3Q9Y5J5 127 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms