RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 NANOS2P60321 138 aaKnown RBP2.55□□□□□ -2
HMGB3P8-201ENST00000449709 DAD1P61803 113 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 ERHP84090 104 aaKnown RBP2.55□□□□□ -2
HMGB3P8-201ENST00000449709 RBM3P98179 157 aaKnown RBP2.55□□□□□ -2
HMGB3P8-201ENST00000449709 WT1-ASQ06250 92 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 Q6ZRP5 223 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 GPHB5Q86YW7 130 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 RMI2Q96E14 147 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 HES7Q9BYE0 225 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 SMAD5-AS1Q9Y6J3 95 aa2.55□□□□□ -2
HMGB3P8-201ENST00000449709 POLEQ07864 2286 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 ARHGAP32A7KAX9 2087 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 IGLV3-12A0A075B6K2 115 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 IGKV3D-20A0A0C4DH25 116 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 LOC100131303A0A0U1RQF7 123 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 A0A1B0GUV1 79 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 M0R1W7 72 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 ZNF73O43830 326 aaPredicted RBP2.54□□□□□ -2
HMGB3P8-201ENST00000449709 SAA2P0DJI9 122 aaPredicted RBP2.54□□□□□ -2
HMGB3P8-201ENST00000449709 LINC00315P59091 139 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 UBE2BP63146 152 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 RPL39P5Q59GN2 51 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 HCP5Q6MZN7 132 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 ATP11AUNQ6ZP68 121 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 LCA10Q71F78 164 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 SMIM29Q86T20 159 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 DIRC1Q969H9 104 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 PRAC1Q96KF2 57 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 OPRPNQ99935 248 aaPredicted RBP2.54□□□□□ -2
HMGB3P8-201ENST00000449709 CYP4F30PQ9H0H9 118 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 ESM1Q9NQ30 184 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 GON4LQ3T8J9 2241 aa2.54□□□□□ -2
HMGB3P8-201ENST00000449709 MALRD1Q5VYJ5 2156 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 A0A087X002 238 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 H7C2G1 150 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 IGLV2-23P01705 113 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 IGKV2-30P06310 120 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 SAA1P0DJI8 122 aaPredicted RBP2.53□□□□□ -2
HMGB3P8-201ENST00000449709 IGHV3-30-3P0DP02 117 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 RPS21P63220 83 aaKnown RBP2.53□□□□□ -2
HMGB3P8-201ENST00000449709 CXCL6P80162 114 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 CIRBPQ14011 172 aaKnown RBP2.53□□□□□ -2
HMGB3P8-201ENST00000449709 C9orf129Q5T035 196 aaKnown RBP2.53□□□□□ -2
HMGB3P8-201ENST00000449709 DYNLRB2Q8TF09 96 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 FAM104AQ969W3 186 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 ZNF625Q96I27 306 aaPredicted RBP2.53□□□□□ -2
HMGB3P8-201ENST00000449709 C11orf68Q9H3H3 251 aaKnown RBP2.53□□□□□ -2
HMGB3P8-201ENST00000449709 Q9HAA7 133 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 CCL26Q9Y258 94 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 PHLDA3Q9Y5J5 127 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 KIF25-AS1Q9Y6Z4 181 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 BRWD1Q9NSI6 2320 aa2.53□□□□□ -2
HMGB3P8-201ENST00000449709 TRAV23DV6A0A075B6W5 121 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 IGHV3-20A0A0C4DH32 117 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 I3L2K1 104 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 TMEM256-PLSCR3K7ERE1 68 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 NDUFA1O15239 70 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 LY6HO94772 140 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 IGKV1-17P01599 117 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 LINC01547P58512 204 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 SYCNQ0VAF6 134 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 KIAA0087Q14695 138 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 C17orf58Q2M2W7 97 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 DEFB110Q30KQ9 67 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 IGFL3Q6UXB1 125 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 C7orf65Q6ZTY9 151 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 C9orf106Q8NAJ2 232 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 LENEPQ9Y5L5 61 aa2.52□□□□□ -2.01
HMGB3P8-201ENST00000449709 GOLGB1Q14789 3259 aaKnown RBP2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 NAV3Q8IVL0 2385 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 LOC110117498A0A087WWA1 95 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 IGHV3-43A0A0B4J1X8 118 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 TRAV22A0A0B4J277 110 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 KLLNB2CW77 178 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 JMJD7-PLA2G4BH0Y9G9 81 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 H0YGX0 51 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 K7EQD1 137 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 UBE2L6O14933 153 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 GNRH2O43555 120 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 IGKV1-16P04430 117 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 IGHV3-43DP0DP04 118 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 C15orf32Q32M92 178 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 Q5VV11 94 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 SOSTDC1Q6X4U4 206 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 FAM19A3Q7Z5A8 133 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 TMEM254Q8TBM7 123 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 LINC00308Q8TCZ7 52 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 ZCCHC13Q8WW36 166 aaKnown RBP2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 OCR1Q9BZK8 76 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 C14orf132Q9NPU4 83 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 NDUFA12Q9UI09 145 aa2.51□□□□□ -2.01
HMGB3P8-201ENST00000449709 FREM1Q5H8C1 2179 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 ARFGEF3Q5TH69 2177 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 IGLV4-3A0A075B6K6 122 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 A8MUN3 132 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 KRTAP29-1A8MX34 341 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 DEFB108AA8MXU0 73 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 C16orf90A8MZG2 172 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 SRRM5B3KS81 715 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 KRTAP10-9P60411 292 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms