RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 TRAPPC1Q9Y5R8 145 aa8.09□□□□□ -1.11
AC004540.1-204ENST00000449537 H3BVH4 76 aa8.08□□□□□ -1.12
AC004540.1-204ENST00000449537 M0R2P5 195 aa8.08□□□□□ -1.12
AC004540.1-204ENST00000449537 CIDEAO60543 219 aa8.08□□□□□ -1.12
AC004540.1-204ENST00000449537 IGLC6P0CF74 106 aa8.08□□□□□ -1.12
AC004540.1-204ENST00000449537 RNASE3P12724 160 aaKnown RBP8.08□□□□□ -1.12
AC004540.1-204ENST00000449537 FOXA3P55318 350 aaPredicted RBP8.08□□□□□ -1.12
AC004540.1-204ENST00000449537 HBBP68871 147 aa8.08□□□□□ -1.12
AC004540.1-204ENST00000449537 SSBP4Q9BWG4 385 aaPredicted RBP8.08□□□□□ -1.12
AC004540.1-204ENST00000449537 GNB1LQ9BYB4 327 aa8.08□□□□□ -1.12
AC004540.1-204ENST00000449537 CNFNQ9BYD5 112 aa8.08□□□□□ -1.12
AC004540.1-204ENST00000449537 PHLDA3Q9Y5J5 127 aa8.08□□□□□ -1.12
AC004540.1-204ENST00000449537 A0A1B0GUT8 65 aa8.07□□□□□ -1.12
AC004540.1-204ENST00000449537 KRTAP10-8P60410 259 aa8.07□□□□□ -1.12
AC004540.1-204ENST00000449537 MRPL54Q6P161 138 aaKnown RBP8.07□□□□□ -1.12
AC004540.1-204ENST00000449537 NUP35Q8NFH5 326 aa8.07□□□□□ -1.12
AC004540.1-204ENST00000449537 RMI2Q96E14 147 aa8.07□□□□□ -1.12
AC004540.1-204ENST00000449537 LPAP08519 4548 aa8.06□□□□□ -1.12
AC004540.1-204ENST00000449537 TMSB15BA0A087X1C1 80 aa8.06□□□□□ -1.12
AC004540.1-204ENST00000449537 A0A0J9YXV3 536 aa8.06□□□□□ -1.12
AC004540.1-204ENST00000449537 TRGC2P03986 189 aa8.06□□□□□ -1.12
AC004540.1-204ENST00000449537 ARMS2P0C7Q2 107 aa8.06□□□□□ -1.12
AC004540.1-204ENST00000449537 Q6ZQT7 251 aa8.06□□□□□ -1.12
AC004540.1-204ENST00000449537 RASL10AQ92737 203 aa8.06□□□□□ -1.12
AC004540.1-204ENST00000449537 PGLYRP4Q96LB8 373 aa8.06□□□□□ -1.12
AC004540.1-204ENST00000449537 TPPP3Q9BW30 176 aa8.06□□□□□ -1.12
AC004540.1-204ENST00000449537 A8MWV9 139 aa8.05□□□□□ -1.12
AC004540.1-204ENST00000449537 RHODO00212 210 aa8.05□□□□□ -1.12
AC004540.1-204ENST00000449537 GNRH2O43555 120 aa8.05□□□□□ -1.12
AC004540.1-204ENST00000449537 TRGC1P0CF51 173 aa8.05□□□□□ -1.12
AC004540.1-204ENST00000449537 SPANXN1Q5VSR9 72 aa8.05□□□□□ -1.12
AC004540.1-204ENST00000449537 AP1S3Q96PC3 154 aa8.05□□□□□ -1.12
AC004540.1-204ENST00000449537 MRPL18Q9H0U6 180 aaKnown RBP8.05□□□□□ -1.12
AC004540.1-204ENST00000449537 MUC2Q02817 5179 aa8.04□□□□□ -1.12
AC004540.1-204ENST00000449537 GRIFINA4D1Z8 144 aa8.04□□□□□ -1.12
AC004540.1-204ENST00000449537 FABP9Q0Z7S8 132 aa8.04□□□□□ -1.12
AC004540.1-204ENST00000449537 ZNF876PQ49A33 203 aa8.04□□□□□ -1.12
AC004540.1-204ENST00000449537 SMIM15Q7Z3B0 74 aa8.04□□□□□ -1.12
AC004540.1-204ENST00000449537 DAZ4Q86SG3 579 aaKnown RBP8.04□□□□□ -1.12
AC004540.1-204ENST00000449537 Q8N3U1 123 aa8.04□□□□□ -1.12
AC004540.1-204ENST00000449537 DAZ3Q9NR90 486 aaKnown RBP8.04□□□□□ -1.12
AC004540.1-204ENST00000449537 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
AC004540.1-204ENST00000449537 TRAV4A0A0B4J268 109 aa8.03□□□□□ -1.12
AC004540.1-204ENST00000449537 APCSP02743 223 aa8.03□□□□□ -1.12
AC004540.1-204ENST00000449537 GZMBP10144 247 aa8.03□□□□□ -1.12
AC004540.1-204ENST00000449537 CAMPP49913 170 aa8.03□□□□□ -1.12
AC004540.1-204ENST00000449537 C14orf177Q52M58 125 aa8.03□□□□□ -1.12
AC004540.1-204ENST00000449537 OR4C5Q8NGB2 326 aa8.03□□□□□ -1.12
AC004540.1-204ENST00000449537 GTSF1Q8WW33 167 aa8.03□□□□□ -1.12
AC004540.1-204ENST00000449537 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.03□□□□□ -1.12
AC004540.1-204ENST00000449537 A0A1B0GXF2 115 aa8.02□□□□□ -1.13
AC004540.1-204ENST00000449537 LYZL1Q6UWQ5 148 aa8.02□□□□□ -1.13
AC004540.1-204ENST00000449537 ZFP2Q6ZN57 461 aa8.02□□□□□ -1.13
AC004540.1-204ENST00000449537 TMEM136Q6ZRR5 245 aa8.02□□□□□ -1.13
AC004540.1-204ENST00000449537 OR10AG1Q8NH19 301 aa8.02□□□□□ -1.13
AC004540.1-204ENST00000449537 GTSF1LQ9H1H1 148 aa8.02□□□□□ -1.13
AC004540.1-204ENST00000449537 M0R381 172 aa8.01□□□□□ -1.13
AC004540.1-204ENST00000449537 SMIM17P0DL12 118 aa8.01□□□□□ -1.13
AC004540.1-204ENST00000449537 HIST1H2BKO60814 126 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 HIST1H2BJP06899 126 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 GATA1P15976 413 aaPredicted RBP8□□□□□ -1.13
AC004540.1-204ENST00000449537 HIST1H2BOP23527 126 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 HIST1H2BBP33778 126 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 NDUFA6P56556 154 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 HIST1H2BDP58876 126 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 HIST1H2BCP62807 126 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 TWIST1Q15672 202 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 HIST2H2BEQ16778 126 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 HIST2H2BFQ5QNW6 126 aaPredicted RBP8□□□□□ -1.13
AC004540.1-204ENST00000449537 HIST1H2BHQ93079 126 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 DPH3Q96FX2 82 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 HIST1H2BNQ99877 126 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 HIST1H2BMQ99879 126 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 CRCT1Q9UGL9 99 aa8□□□□□ -1.13
AC004540.1-204ENST00000449537 PANO1I0J062 215 aa7.99□□□□□ -1.13
AC004540.1-204ENST00000449537 S100A2P29034 98 aa7.99□□□□□ -1.13
AC004540.1-204ENST00000449537 GATD1Q8NB37 220 aa7.99□□□□□ -1.13
AC004540.1-204ENST00000449537 PRADC1Q9BSG0 188 aa7.99□□□□□ -1.13
AC004540.1-204ENST00000449537 NTF3P20783 257 aa7.98□□□□□ -1.13
AC004540.1-204ENST00000449537 CFAP126Q5VTH2 177 aa7.98□□□□□ -1.13
AC004540.1-204ENST00000449537 DMRTA1Q5VZB9 504 aa7.98□□□□□ -1.13
AC004540.1-204ENST00000449537 C9orf163Q8N9P6 203 aa7.98□□□□□ -1.13
AC004540.1-204ENST00000449537 DNAJC30Q96LL9 226 aa7.98□□□□□ -1.13
AC004540.1-204ENST00000449537 TMEM191AQ9H0A3 160 aa7.98□□□□□ -1.13
AC004540.1-204ENST00000449537 H7C1H1 209 aa7.97□□□□□ -1.13
AC004540.1-204ENST00000449537 PHOX2AO14813 284 aa7.97□□□□□ -1.13
AC004540.1-204ENST00000449537 DGAT2L7PQ6IED9 249 aa7.97□□□□□ -1.13
AC004540.1-204ENST00000449537 REG3GQ6UW15 175 aa7.97□□□□□ -1.13
AC004540.1-204ENST00000449537 SDIM1Q6ZPB5 146 aa7.97□□□□□ -1.13
AC004540.1-204ENST00000449537 BAGE3Q86Y29 109 aa7.97□□□□□ -1.13
AC004540.1-204ENST00000449537 SLC25A29Q8N8R3 303 aa7.97□□□□□ -1.13
AC004540.1-204ENST00000449537 TRBV6-4A0A1B0GX49 114 aa7.96□□□□□ -1.14
AC004540.1-204ENST00000449537 SNRPEP62304 92 aaKnown RBP7.96□□□□□ -1.14
AC004540.1-204ENST00000449537 RHOHQ15669 191 aa7.96□□□□□ -1.14
AC004540.1-204ENST00000449537 TRBV10-1A0A0K0K1A3 114 aa7.95□□□□□ -1.14
AC004540.1-204ENST00000449537 C5orf52A6NGY3 159 aa7.95□□□□□ -1.14
AC004540.1-204ENST00000449537 PPP1R17O96001 155 aa7.95□□□□□ -1.14
AC004540.1-204ENST00000449537 PPBPP02775 128 aa7.95□□□□□ -1.14
AC004540.1-204ENST00000449537 Q0VG73 95 aa7.95□□□□□ -1.14
AC004540.1-204ENST00000449537 COA6Q5JTJ3 125 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms