RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 IGHV7-4-1A0A0J9YVY3 117 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 B4DSR2 109 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 H3BVH4 76 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 OVOL1O14753 267 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 IGHG2P01859 326 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 COX8AP10176 69 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 TCTAP57738 103 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 DEFB1P60022 68 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 LGALS9BQ3B8N2 356 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 RNASE13Q5GAN3 156 aaKnown RBP2.62□□□□□ -1.99
VPS29-202ENST00000447578 PRR9Q5T870 116 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 SPANXN1Q5VSR9 72 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 LGALS9CQ6DKI2 356 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 Q6ZQT7 251 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 OR2K2Q8NGT1 345 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 ORAOV1Q8WV07 137 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 LINC00477Q96M19 166 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 RHPN1-AS1Q9BWJ2 59 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 CNFNQ9BYD5 112 aa2.62□□□□□ -1.99
VPS29-202ENST00000447578 NXT2Q9NPJ8 142 aaKnown RBP2.62□□□□□ -1.99
VPS29-202ENST00000447578 URB1O60287 2271 aaKnown RBP2.62□□□□□ -1.99
VPS29-202ENST00000447578 SVILO95425 2214 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 FREM2Q5SZK8 3169 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 TRAV26-2A0A0B4J265 109 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 LINC01546A6NGU7 62 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 M0R381 172 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 PRB2P02812 416 aaPredicted RBP2.61□□□□□ -1.99
VPS29-202ENST00000447578 MGPP08493 103 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 COX6B1P14854 86 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 SLC25A16P16260 332 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 S100A4P26447 101 aaKnown RBP2.61□□□□□ -1.99
VPS29-202ENST00000447578 FCER1GP30273 86 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 RNASE4P34096 147 aaKnown RBP2.61□□□□□ -1.99
VPS29-202ENST00000447578 ASIPP42127 132 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 DEFB112Q30KQ8 113 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 BVES-AS1Q5T3Y7 98 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 GPHB5Q86YW7 130 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 ZFAND2AQ8N6M9 145 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 Q8N8P6 123 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 MRAP2Q96G30 205 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 SMPXQ9UHP9 88 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 LENEPQ9Y5L5 61 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 MALRD1Q5VYJ5 2156 aa2.61□□□□□ -1.99
VPS29-202ENST00000447578 ZGRF1Q86YA3 2104 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 IGLV2-18A0A075B6J9 118 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 C7orf71A4D174 169 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 J3QLI3 93 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 TAX1BP3O14907 124 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 GNRH2O43555 120 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 PRB1P04280 392 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 FGF6P10767 208 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 C10orf99Q6UWK7 81 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 ZFP2Q6ZN57 461 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 C2orf91Q6ZV80 131 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 CIRBP-AS1Q8TBR5 109 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 MYOZ3Q8TDC0 251 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 DPH3P1Q9H4G8 78 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 DAZ1Q9NQZ3 744 aaKnown RBP2.6□□□□□ -1.99
VPS29-202ENST00000447578 PHLDA3Q9Y5J5 127 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 FAM186AA6NE01 2351 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 CACNA1HO95180 2353 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 EP300Q09472 2414 aaPredicted RBP2.6□□□□□ -1.99
VPS29-202ENST00000447578 TNCP24821 2201 aa2.6□□□□□ -1.99
VPS29-202ENST00000447578 COL6A3P12111 3177 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 CCL25O15444 150 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 DPM2O94777 84 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 IGKCP01834 107 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 SMIM17P0DL12 118 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 RNASE3P12724 160 aaKnown RBP2.59□□□□□ -1.99
VPS29-202ENST00000447578 PSMB8P28062 276 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 HSD52Q0P140 79 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 TMEM97Q5BJF2 176 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 PSMG4Q5JS54 123 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 SAMD13Q5VXD3 122 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 DEFB125Q8N687 156 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 SLC25A29Q8N8R3 303 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 RPL39LQ96EH5 51 aaKnown RBP2.59□□□□□ -1.99
VPS29-202ENST00000447578 CHCHD7Q9BUK0 85 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 SMIM2Q9BVW6 85 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 ANAPC11Q9NYG5 84 aa2.59□□□□□ -1.99
VPS29-202ENST00000447578 ICE1Q9Y2F5 2266 aa2.58□□□□□ -2
VPS29-202ENST00000447578 A0A087WX48 190 aa2.58□□□□□ -2
VPS29-202ENST00000447578 A0A096LNT2 108 aa2.58□□□□□ -2
VPS29-202ENST00000447578 IGKV2D-26A0A0A0MRZ7 120 aa2.58□□□□□ -2
VPS29-202ENST00000447578 TRAV12-3A0A0B4J271 114 aa2.58□□□□□ -2
VPS29-202ENST00000447578 LGALS1P09382 135 aaKnown RBP2.58□□□□□ -2
VPS29-202ENST00000447578 CD7P09564 240 aa2.58□□□□□ -2
VPS29-202ENST00000447578 CMC4P56277 68 aaPredicted RBP2.58□□□□□ -2
VPS29-202ENST00000447578 SEC11AP67812 179 aa2.58□□□□□ -2
VPS29-202ENST00000447578 LUZP6Q538Z0 58 aa2.58□□□□□ -2
VPS29-202ENST00000447578 AMMECR1LQ6DCA0 310 aa2.58□□□□□ -2
VPS29-202ENST00000447578 LINC00337Q8N6G1 96 aa2.58□□□□□ -2
VPS29-202ENST00000447578 Q8N9L7 120 aa2.58□□□□□ -2
VPS29-202ENST00000447578 DCANP1Q8TF63 244 aa2.58□□□□□ -2
VPS29-202ENST00000447578 AP1S3Q96PC3 154 aa2.58□□□□□ -2
VPS29-202ENST00000447578 SCGB3A1Q96QR1 104 aa2.58□□□□□ -2
VPS29-202ENST00000447578 C20orf78Q9BR46 151 aa2.58□□□□□ -2
VPS29-202ENST00000447578 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
VPS29-202ENST00000447578 MRPL35Q9NZE8 188 aaKnown RBP2.58□□□□□ -2
VPS29-202ENST00000447578 VPREB3Q9UKI3 123 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms