RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 OR10G2Q8NGC3 310 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 OR4C16Q8NGL9 310 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 SLC25A38Q96DW6 304 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 RNASE7Q9H1E1 156 aaKnown RBP3.04□□□□□ -1.92
SDCBP-205ENST00000447267 NRN1Q9NPD7 142 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 RPRMQ9NS64 109 aa3.04□□□□□ -1.92
SDCBP-205ENST00000447267 RCL1Q9Y2P8 373 aaKnown RBP3.04□□□□□ -1.92
SDCBP-205ENST00000447267 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 C17orf112F2Z3M2 114 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 F8W1H4 67 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 H3BNG1 76 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 NDUFB4O95168 129 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 IGLC6P0CF74 106 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 HLA-DRB4P13762 266 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 CRYBB3P26998 211 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 RPL27AP46776 148 aaKnown RBP3.03□□□□□ -1.92
SDCBP-205ENST00000447267 GALR1P47211 349 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 Q0VG73 95 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 ZNF506Q5JVG8 444 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 Q6Q795 121 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 TBC1D26Q86UD7 250 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 MMD2Q8IY49 270 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 TMEM229BQ8NBD8 167 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 ATP6V0E2Q8NHE4 81 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 C18orf32Q8TCD1 76 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 IL1F10Q8WWZ1 152 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 RASL10AQ92737 203 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 VSIG2Q96IQ7 327 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 LITAFQ99732 161 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 C20orf78Q9BR46 151 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 LINC00467Q9BRT7 94 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 MRPL32Q9BYC8 188 aaKnown RBP3.03□□□□□ -1.92
SDCBP-205ENST00000447267 SLC25A39Q9BZJ4 359 aaPredicted RBP3.03□□□□□ -1.92
SDCBP-205ENST00000447267 FGF20Q9NP95 211 aaPredicted RBP3.03□□□□□ -1.92
SDCBP-205ENST00000447267 HLA-DRB4X5D2U9 266 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
SDCBP-205ENST00000447267 TRBV20-1A0A075B6N2 111 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 A0A087X0K7 114 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 MEIS3P1A6NDR6 274 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 FAM90A26D6RGX4 464 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 SERF1AO75920 110 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 CTSGP08311 255 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 CRYGAP11844 174 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 RND3P61587 244 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 CYCSP99999 105 aaKnown RBP3.02□□□□□ -1.93
SDCBP-205ENST00000447267 SLC38A11Q08AI6 406 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 GAGE2BQ13066 116 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 PMVKQ15126 192 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 GAGE2EQ4V326 116 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 GDF5OSQ5U4N7 250 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 Q5XG85 94 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 C12orf73Q69YU5 71 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 SLC25A34Q6PIV7 304 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 LYPD5Q6UWN5 251 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 GATD1Q8NB37 220 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 OR5D14Q8NGL3 314 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 OR5H2Q8NGV7 314 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 NMES1Q9C002 83 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 COMMD5Q9GZQ3 224 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 GAGE2DQ9UEU5 116 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 TP53TG3Q9ULZ0 132 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 TRAPPC1Q9Y5R8 145 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 PXMP4Q9Y6I8 212 aa3.02□□□□□ -1.93
SDCBP-205ENST00000447267 TRAV5A0A0B4J249 113 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 FAM236DA0A1B0GTK5 79 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 PGLYRP1O75594 196 aaPredicted RBP3.01□□□□□ -1.93
SDCBP-205ENST00000447267 CXorf1O96002 111 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 SLC25A5P05141 298 aaKnown RBP3.01□□□□□ -1.93
SDCBP-205ENST00000447267 GPX1P07203 203 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 KRTAP2-3P0C7H8 128 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 C3orf79P0CE67 100 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 FAM236CP0DP71 79 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 DEFA4P12838 97 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 NKX2-1P43699 371 aaPredicted RBP3.01□□□□□ -1.93
SDCBP-205ENST00000447267 RTL8BQ17RB0 113 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 GOLT1AQ6ZVE7 132 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 VGLL1Q99990 258 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 PMCHL2Q9BQD1 86 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 KRTAP2-4Q9BYR9 128 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 SH3BGRL3Q9H299 93 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 JPT2Q9H910 190 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 C21orf62Q9NYP8 219 aa3.01□□□□□ -1.93
SDCBP-205ENST00000447267 GGTLC3B5MD39 225 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 SYS1-DBNDD2H3BUS1 97 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 K7EIM0 57 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 MPDU1O75352 247 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 MT-ND6P03923 174 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 CHTF8P0CG12 524 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 NMUP48645 174 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 SEC61BP60468 96 aaKnown RBP3□□□□□ -1.93
SDCBP-205ENST00000447267 HERVK_113P63121 156 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 ZNF85Q03923 595 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 SPINK6Q6UWN8 80 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 BAGE3Q86Y29 109 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 BAGE2Q86Y30 109 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 VKORC1L1Q8N0U8 176 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 ATOH7Q8N100 152 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 EXOC3-AS1Q8N2X6 119 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 LINC00612Q8N6U2 182 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 FAM213BQ8TBF2 198 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms