RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 IGHV4-38-2P0DP08 117 aa14.12□□□□□ -0.15
SHANK3-203ENST00000445220 C5orf56Q8N8D9 126 aa14.12□□□□□ -0.15
SHANK3-203ENST00000445220 DEFB136Q30KP8 78 aa14.11□□□□□ -0.15
SHANK3-203ENST00000445220 ZNF106Q9H2Y7 1883 aaKnown RBP14.11□□□□□ -0.15
SHANK3-203ENST00000445220 SPAG11BQ08648 103 aa14.11□□□□□ -0.15
SHANK3-203ENST00000445220 COX7BP24311 80 aa14.11□□□□□ -0.15
SHANK3-203ENST00000445220 SLURP1P55000 103 aa14.11□□□□□ -0.15
SHANK3-203ENST00000445220 TRBV10-1A0A0K0K1A3 114 aa14.11□□□□□ -0.15
SHANK3-203ENST00000445220 NDUFC1O43677 76 aa14.11□□□□□ -0.15
SHANK3-203ENST00000445220 USP17L23D6RBM5 183 aa14.11□□□□□ -0.15
SHANK3-203ENST00000445220 TMEM89A2RUT3 159 aa14.1□□□□□ -0.15
SHANK3-203ENST00000445220 INSL3P51460 131 aa14.1□□□□□ -0.15
SHANK3-203ENST00000445220 Q6Q795 121 aa14.1□□□□□ -0.15
SHANK3-203ENST00000445220 LINC00308Q8TCZ7 52 aa14.1□□□□□ -0.15
SHANK3-203ENST00000445220 OBSL1O75147 1896 aa14.1□□□□□ -0.15
SHANK3-203ENST00000445220 IGHV3-30P01768 117 aa14.09□□□□□ -0.15
SHANK3-203ENST00000445220 IGHV3-30-5P0DP03 117 aa14.09□□□□□ -0.15
SHANK3-203ENST00000445220 BLCAPP62952 87 aa14.09□□□□□ -0.15
SHANK3-203ENST00000445220 GPHB5Q86YW7 130 aa14.09□□□□□ -0.15
SHANK3-203ENST00000445220 TNRC6BQ9UPQ9 1833 aaKnown RBP14.09□□□□□ -0.15
SHANK3-203ENST00000445220 A0A0J9YX75 114 aa14.09□□□□□ -0.15
SHANK3-203ENST00000445220 CRIP3Q6Q6R5 217 aa14.09□□□□□ -0.15
SHANK3-203ENST00000445220 NCKAP5O14513 1909 aa14.08□□□□□ -0.15
SHANK3-203ENST00000445220 Q8N7P7 452 aa14.08□□□□□ -0.16
SHANK3-203ENST00000445220 UFSP1Q6NVU6 142 aa14.08□□□□□ -0.16
SHANK3-203ENST00000445220 RNF185Q96GF1 192 aa14.08□□□□□ -0.16
SHANK3-203ENST00000445220 CDKN2A-AS1Q9UH64 79 aa14.08□□□□□ -0.16
SHANK3-203ENST00000445220 MSMPQ1L6U9 139 aa14.07□□□□□ -0.16
SHANK3-203ENST00000445220 EIF4EBP1Q13541 118 aaPredicted RBP14.07□□□□□ -0.16
SHANK3-203ENST00000445220 IGLV4-3A0A075B6K6 122 aa14.07□□□□□ -0.16
SHANK3-203ENST00000445220 CGB3P0DN86 165 aa14.07□□□□□ -0.16
SHANK3-203ENST00000445220 TIRAPP58753 221 aa14.07□□□□□ -0.16
SHANK3-203ENST00000445220 LINC00574Q9H8X3 128 aa14.07□□□□□ -0.16
SHANK3-203ENST00000445220 MYCNOSP40205 109 aa14.06□□□□□ -0.16
SHANK3-203ENST00000445220 DSCAML1Q8TD84 2053 aa14.06□□□□□ -0.16
SHANK3-203ENST00000445220 M0QXV9 152 aa14.06□□□□□ -0.16
SHANK3-203ENST00000445220 CGB7P0DN87 165 aa14.06□□□□□ -0.16
SHANK3-203ENST00000445220 HHLA3Q9XRX5 114 aa14.06□□□□□ -0.16
SHANK3-203ENST00000445220 CRIP1P50238 77 aa14.06□□□□□ -0.16
SHANK3-203ENST00000445220 LST1O00453 97 aa14.05□□□□□ -0.16
SHANK3-203ENST00000445220 SIRPDQ9H106 197 aa14.05□□□□□ -0.16
SHANK3-203ENST00000445220 ANKHD1Q8IWZ3 2542 aaKnown RBP14.05□□□□□ -0.16
SHANK3-203ENST00000445220 WFDC11Q8NEX6 87 aa14.05□□□□□ -0.16
SHANK3-203ENST00000445220 UNQ9165/PRO28630Q6UXU0 137 aa14.04□□□□□ -0.16
SHANK3-203ENST00000445220 Q8N976 141 aa14.04□□□□□ -0.16
SHANK3-203ENST00000445220 PLA2G2AP14555 144 aa14.04□□□□□ -0.16
SHANK3-203ENST00000445220 LINC00310P59036 64 aa14.04□□□□□ -0.16
SHANK3-203ENST00000445220 NCOA6Q14686 2063 aaPredicted RBP14.04□□□□□ -0.16
SHANK3-203ENST00000445220 LINC00694P0DN24 101 aa14.04□□□□□ -0.16
SHANK3-203ENST00000445220 ZFP36P26651 326 aaKnown RBP14.04□□□□□ -0.16
SHANK3-203ENST00000445220 PIK3CD-AS1Q5SR53 167 aa14.04□□□□□ -0.16
SHANK3-203ENST00000445220 Q8NA96 180 aa14.04□□□□□ -0.16
SHANK3-203ENST00000445220 HIVEP2P31629 2446 aa14.03□□□□□ -0.16
SHANK3-203ENST00000445220 FREM1Q5H8C1 2179 aa14.03□□□□□ -0.16
SHANK3-203ENST00000445220 IGHV4OR15-8A0A075B7B6 117 aa14.03□□□□□ -0.16
SHANK3-203ENST00000445220 A0A087WW49 117 aa14.03□□□□□ -0.16
SHANK3-203ENST00000445220 C9orf66Q5T8R8 295 aa14.03□□□□□ -0.16
SHANK3-203ENST00000445220 TMEM131Q92545 1883 aa14.03□□□□□ -0.16
SHANK3-203ENST00000445220 SLPIP03973 132 aa14.02□□□□□ -0.16
SHANK3-203ENST00000445220 C1orf195Q5TG92 126 aa14.02□□□□□ -0.16
SHANK3-203ENST00000445220 SPART-AS1P0CW21 52 aa14.02□□□□□ -0.17
SHANK3-203ENST00000445220 TIMM17BO60830 172 aa14.01□□□□□ -0.17
SHANK3-203ENST00000445220 ODF3Q96PU9 254 aa14.01□□□□□ -0.17
SHANK3-203ENST00000445220 SONP18583 2426 aaKnown RBP14.01□□□□□ -0.17
SHANK3-203ENST00000445220 ZFAND2AQ8N6M9 145 aa14.01□□□□□ -0.17
SHANK3-203ENST00000445220 SCXQ7RTU7 201 aa14□□□□□ -0.17
SHANK3-203ENST00000445220 IBA57-AS1B1ANH7 110 aa14□□□□□ -0.17
SHANK3-203ENST00000445220 LINC00467Q9BRT7 94 aa14□□□□□ -0.17
SHANK3-203ENST00000445220 SMIM9A6NGZ8 99 aa13.99□□□□□ -0.17
SHANK3-203ENST00000445220 FSTL3O95633 263 aa13.99□□□□□ -0.17
SHANK3-203ENST00000445220 CCDC140Q96MF4 163 aa13.99□□□□□ -0.17
SHANK3-203ENST00000445220 TMEM263Q8WUH6 116 aaKnown RBP13.99□□□□□ -0.17
SHANK3-203ENST00000445220 FAM222AQ5U5X8 452 aa13.99□□□□□ -0.17
SHANK3-203ENST00000445220 WISP2O76076 250 aa13.98□□□□□ -0.17
SHANK3-203ENST00000445220 IGLV2-11P01706 119 aa13.98□□□□□ -0.17
SHANK3-203ENST00000445220 FASNP49327 2511 aaKnown RBP13.97□□□□□ -0.17
SHANK3-203ENST00000445220 SMIM26A0A096LP01 95 aa13.97□□□□□ -0.17
SHANK3-203ENST00000445220 KIAA1549LQ6ZVL6 1849 aa13.97□□□□□ -0.17
SHANK3-203ENST00000445220 H0Y9J4 135 aa13.97□□□□□ -0.17
SHANK3-203ENST00000445220 SNURFQ9Y675 71 aa13.97□□□□□ -0.17
SHANK3-203ENST00000445220 H7C423 109 aa13.96□□□□□ -0.17
SHANK3-203ENST00000445220 C1orf229Q6ZS94 237 aaPredicted RBP13.96□□□□□ -0.17
SHANK3-203ENST00000445220 TRBV27A0A0K0K1C4 114 aa13.96□□□□□ -0.17
SHANK3-203ENST00000445220 NRACQ8N912 160 aa13.96□□□□□ -0.17
SHANK3-203ENST00000445220 C20orf173Q96LM9 149 aa13.96□□□□□ -0.17
SHANK3-203ENST00000445220 COL4A4P53420 1690 aaPredicted RBP13.96□□□□□ -0.17
SHANK3-203ENST00000445220 M0QY20 66 aa13.96□□□□□ -0.18
SHANK3-203ENST00000445220 HRCT1Q6UXD1 115 aa13.96□□□□□ -0.18
SHANK3-203ENST00000445220 KLK12Q9UKR0 248 aa13.96□□□□□ -0.18
SHANK3-203ENST00000445220 PYGO1Q9Y3Y4 419 aa13.96□□□□□ -0.18
SHANK3-203ENST00000445220 A6NDX4 124 aa13.95□□□□□ -0.18
SHANK3-203ENST00000445220 ODF3BA8MYP8 253 aa13.95□□□□□ -0.18
SHANK3-203ENST00000445220 ESM1Q9NQ30 184 aa13.95□□□□□ -0.18
SHANK3-203ENST00000445220 SEC61GP60059 68 aa13.95□□□□□ -0.18
SHANK3-203ENST00000445220 Q6JHZ5 121 aa13.95□□□□□ -0.18
SHANK3-203ENST00000445220 CCDC168Q8NDH2 2452 aa13.95□□□□□ -0.18
SHANK3-203ENST00000445220 ZMAT4Q9H898 229 aa13.94□□□□□ -0.18
SHANK3-203ENST00000445220 FAM19A3Q7Z5A8 133 aa13.94□□□□□ -0.18
SHANK3-203ENST00000445220 TRBV6-5A0A0K0K1A5 114 aa13.94□□□□□ -0.18
SHANK3-203ENST00000445220 ADAMTS9Q9P2N4 1935 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms