RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 TRBV6-4A0A1B0GX49 114 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 F8W1H4 67 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 H3BQ15 152 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 SSSCA1O60232 199 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 UBE2L3P68036 154 aaKnown RBP2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 DEFB103AP81534 67 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 C5orf38Q86SI9 138 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 SBSPONQ8IVN8 264 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 TMEM141Q96I45 108 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 PRO1933Q9H354 126 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 NDUFA12Q9UI09 145 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 PKD1L2Q7Z442 2459 aa2.34□□□□□ -2.04
TM9SF3-202ENST00000443638 CPSF1Q10570 1443 aaKnown RBP2.34□□□□□ -2.04
TM9SF3-202ENST00000443638 TRAV17A0A0B4J275 112 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 RBAKDNA6NC62 111 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 NUPR1O60356 82 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 MRPS14O60783 128 aaKnown RBP2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 MT-ATP8P03928 68 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 IGLC1P0CG04 106 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 INSL4Q14641 139 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 IQCJQ1A5X6 159 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 PCOTHQ58A44 107 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 PYY3Q5JQD4 70 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 LCE3AQ5TA76 89 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 RPL7L1Q6DKI1 246 aaKnown RBP2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 LCN9Q8WX39 176 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 DPH3P1Q9H4G8 78 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 LINC00312Q9Y6C7 94 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 HTTP42858 3142 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 CENPFP49454 3210 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 LAMA3Q16787 3333 aa2.33□□□□□ -2.04
TM9SF3-202ENST00000443638 SNCAP37840 140 aa2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 POLR2JP52435 117 aaKnown RBP2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 S100A7L2Q5SY68 101 aa2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 SLC48A1Q6P1K1 146 aa2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 PPDPFLQ8WWR9 84 aa2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 ATG5Q9H1Y0 275 aa2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 CDC42SE1Q9NRR8 79 aa2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 KLK9Q9UKQ9 250 aa2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 COL11A1P12107 1806 aaPredicted RBP2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 MUC6Q6W4X9 2439 aa2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 PIEZO1Q92508 2521 aa2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 UNC79Q9P2D8 2635 aa2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 ALPK2Q86TB3 2170 aa2.32□□□□□ -2.04
TM9SF3-202ENST00000443638 MON2Q7Z3U7 1717 aa2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 MAP2P11137 1827 aaKnown RBP2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 KIAA1549LQ6ZVL6 1849 aa2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 UQCRHLA0A096LP55 91 aa2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 A6NIN4 97 aa2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 UQCRHP07919 91 aa2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 CBLN1P23435 193 aa2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 RBM3P98179 157 aaKnown RBP2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 Q0VG73 95 aa2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 FAM74A1Q5RGS3 127 aa2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 MED12LQ86YW9 2145 aa2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 ZNF625Q96I27 306 aaPredicted RBP2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 CACNA1BQ00975 2339 aa2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 MUC3AQ02505 3323 aa2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 COL5A3P25940 1745 aaPredicted RBP2.31□□□□□ -2.04
TM9SF3-202ENST00000443638 TRGV2A0A075B6R0 118 aa2.3□□□□□ -2.04
TM9SF3-202ENST00000443638 A0A0J9YY99 117 aa2.3□□□□□ -2.04
TM9SF3-202ENST00000443638 H3BQF6 201 aa2.3□□□□□ -2.04
TM9SF3-202ENST00000443638 M0R2N4 97 aa2.3□□□□□ -2.04
TM9SF3-202ENST00000443638 INE1O15225 51 aa2.3□□□□□ -2.04
TM9SF3-202ENST00000443638 SPRNQ5BIV9 151 aa2.3□□□□□ -2.04
TM9SF3-202ENST00000443638 UNQ5815/PRO19632Q6UWF5 114 aa2.3□□□□□ -2.04
TM9SF3-202ENST00000443638 COMMD6Q7Z4G1 85 aa2.3□□□□□ -2.04
TM9SF3-202ENST00000443638 AFDNP55196 1824 aaKnown RBP2.3□□□□□ -2.04
TM9SF3-202ENST00000443638 RGPD2P0DJD1 1756 aa2.29□□□□□ -2.04
TM9SF3-202ENST00000443638 NFAT5O94916 1531 aa2.29□□□□□ -2.04
TM9SF3-202ENST00000443638 LOC110117498A0A087WWA1 95 aa2.29□□□□□ -2.04
TM9SF3-202ENST00000443638 H3BRM9 83 aa2.29□□□□□ -2.04
TM9SF3-202ENST00000443638 PRB4P10163 310 aaPredicted RBP2.29□□□□□ -2.04
TM9SF3-202ENST00000443638 SLC25A6P12236 298 aa2.29□□□□□ -2.04
TM9SF3-202ENST00000443638 IL7P13232 177 aa2.29□□□□□ -2.04
TM9SF3-202ENST00000443638 UBE2G1P62253 170 aa2.29□□□□□ -2.04
TM9SF3-202ENST00000443638 RHOHQ15669 191 aa2.29□□□□□ -2.04
TM9SF3-202ENST00000443638 C9orf116Q5BN46 136 aaPredicted RBP2.29□□□□□ -2.04
TM9SF3-202ENST00000443638 BET1LQ9NYM9 111 aa2.29□□□□□ -2.04
TM9SF3-202ENST00000443638 LAMB2P55268 1798 aa2.28□□□□□ -2.04
TM9SF3-202ENST00000443638 GNGT2O14610 69 aa2.28□□□□□ -2.04
TM9SF3-202ENST00000443638 MPV17LQ2QL34 196 aa2.28□□□□□ -2.04
TM9SF3-202ENST00000443638 CSAG1Q6PB30 78 aa2.28□□□□□ -2.04
TM9SF3-202ENST00000443638 MED9Q9NWA0 146 aa2.28□□□□□ -2.04
TM9SF3-202ENST00000443638 EML5Q05BV3 1969 aa2.28□□□□□ -2.04
TM9SF3-202ENST00000443638 DLEC1Q9Y238 1755 aa2.28□□□□□ -2.04
TM9SF3-202ENST00000443638 UNC13CQ8NB66 2214 aa2.27□□□□□ -2.05
TM9SF3-202ENST00000443638 CHD8Q9HCK8 2581 aa2.27□□□□□ -2.05
TM9SF3-202ENST00000443638 PLXNA4Q9HCM2 1894 aa2.27□□□□□ -2.05
TM9SF3-202ENST00000443638 TRBV10-3A0A0K0K1G6 114 aa2.27□□□□□ -2.05
TM9SF3-202ENST00000443638 TMEM30CPA0ZSE6 113 aa2.27□□□□□ -2.05
TM9SF3-202ENST00000443638 HCRTO43612 131 aa2.27□□□□□ -2.05
TM9SF3-202ENST00000443638 ASIPP42127 132 aa2.27□□□□□ -2.05
TM9SF3-202ENST00000443638 NPVFQ9HCQ7 196 aa2.27□□□□□ -2.05
TM9SF3-202ENST00000443638 MRPL35Q9NZE8 188 aaKnown RBP2.27□□□□□ -2.05
TM9SF3-202ENST00000443638 COL4A4P53420 1690 aaPredicted RBP2.27□□□□□ -2.05
TM9SF3-202ENST00000443638 CFAP54Q96N23 3096 aa2.27□□□□□ -2.05
TM9SF3-202ENST00000443638 ANK1P16157 1881 aa2.26□□□□□ -2.05
TM9SF3-202ENST00000443638 FAM208AQ9UK61 1670 aaKnown RBP2.26□□□□□ -2.05
TM9SF3-202ENST00000443638 ZDBF2Q9HCK1 2354 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms