RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 C6orf223Q8N319 242 aa12.05□□□□□ -0.48
CCDC188-201ENST00000439765 RPL36ALQ969Q0 106 aaKnown RBP12.05□□□□□ -0.48
CCDC188-201ENST00000439765 TNFRSF18Q9Y5U5 241 aa12.05□□□□□ -0.48
CCDC188-201ENST00000439765 NPYP01303 97 aa12.04□□□□□ -0.48
CCDC188-201ENST00000439765 TIRAPP58753 221 aa12.04□□□□□ -0.48
CCDC188-201ENST00000439765 PCLOQ9Y6V0 5065 aa12.04□□□□□ -0.48
CCDC188-201ENST00000439765 GTSF1LQ9H1H1 148 aa12.03□□□□□ -0.48
CCDC188-201ENST00000439765 ST20Q9HBF5 79 aa12.03□□□□□ -0.48
CCDC188-201ENST00000439765 C20orf78Q9BR46 151 aa12.02□□□□□ -0.48
CCDC188-201ENST00000439765 POLR2KP53803 58 aaKnown RBP12.02□□□□□ -0.49
CCDC188-201ENST00000439765 UBE2D3P61077 147 aa12.02□□□□□ -0.49
CCDC188-201ENST00000439765 SUMO2P61956 95 aaKnown RBP12.02□□□□□ -0.49
CCDC188-201ENST00000439765 UBE2D2P62837 147 aa12.02□□□□□ -0.49
CCDC188-201ENST00000439765 TRAV8-6A0A0B4J262 113 aa12.01□□□□□ -0.49
CCDC188-201ENST00000439765 SDHAF1A6NFY7 115 aa12.01□□□□□ -0.49
CCDC188-201ENST00000439765 PRSS47A8MTI9 375 aa12.01□□□□□ -0.49
CCDC188-201ENST00000439765 DNAH10OSP0CZ25 163 aa12.01□□□□□ -0.49
CCDC188-201ENST00000439765 LELP1Q5T871 98 aa12.01□□□□□ -0.49
CCDC188-201ENST00000439765 TMEM70Q9BUB7 260 aa12.01□□□□□ -0.49
CCDC188-201ENST00000439765 IGHV3-38A0A0C4DH36 116 aa12□□□□□ -0.49
CCDC188-201ENST00000439765 MAP1LC3AQ9H492 121 aa12□□□□□ -0.49
CCDC188-201ENST00000439765 LOC389332A0A1B0GUA5 103 aa11.99□□□□□ -0.49
CCDC188-201ENST00000439765 RPL32P62910 135 aaKnown RBP11.99□□□□□ -0.49
CCDC188-201ENST00000439765 C18orf32Q8TCD1 76 aa11.99□□□□□ -0.49
CCDC188-201ENST00000439765 VCYO14598 125 aa11.98□□□□□ -0.49
CCDC188-201ENST00000439765 DAZ4Q86SG3 579 aaKnown RBP11.98□□□□□ -0.49
CCDC188-201ENST00000439765 DAZ3Q9NR90 486 aaKnown RBP11.98□□□□□ -0.49
CCDC188-201ENST00000439765 TRBV27A0A0K0K1C4 114 aa11.97□□□□□ -0.49
CCDC188-201ENST00000439765 C1orf196B1AJZ1 125 aa11.97□□□□□ -0.49
CCDC188-201ENST00000439765 PMCHP20382 165 aa11.97□□□□□ -0.49
CCDC188-201ENST00000439765 TNP2Q05952 138 aa11.97□□□□□ -0.49
CCDC188-201ENST00000439765 Q8N3U1 123 aa11.97□□□□□ -0.49
CCDC188-201ENST00000439765 SMIM2Q9BVW6 85 aa11.97□□□□□ -0.49
CCDC188-201ENST00000439765 TRAV9-2A0A087WT02 112 aa11.96□□□□□ -0.49
CCDC188-201ENST00000439765 I3L3M4 83 aa11.96□□□□□ -0.49
CCDC188-201ENST00000439765 IGHV3-30P01768 117 aa11.96□□□□□ -0.49
CCDC188-201ENST00000439765 IGHV3-33P01772 117 aa11.96□□□□□ -0.49
CCDC188-201ENST00000439765 IGHV3-30-3P0DP02 117 aa11.96□□□□□ -0.49
CCDC188-201ENST00000439765 IGHV3-30-5P0DP03 117 aa11.96□□□□□ -0.49
CCDC188-201ENST00000439765 IQCJQ1A5X6 159 aa11.96□□□□□ -0.49
CCDC188-201ENST00000439765 RYR1P21817 5038 aa11.96□□□□□ -0.49
CCDC188-201ENST00000439765 HIST1H2BKO60814 126 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 HIST1H2BJP06899 126 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 HIST1H2BOP23527 126 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 HIST1H2BBP33778 126 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 IFI27P40305 119 aaPredicted RBP11.95□□□□□ -0.5
CCDC188-201ENST00000439765 HIST1H2BDP58876 126 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 HIST1H2BCP62807 126 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 HIST2H2BEQ16778 126 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 LINC01556Q5JQF7 62 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.95□□□□□ -0.5
CCDC188-201ENST00000439765 Q8N8P6 123 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 HIST1H2BHQ93079 126 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 HIST1H2BNQ99877 126 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 HIST1H2BMQ99879 126 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 Q0VG73 95 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 PRSS3P2Q8NHM4 247 aa11.95□□□□□ -0.5
CCDC188-201ENST00000439765 NXT2Q9NPJ8 142 aaKnown RBP11.95□□□□□ -0.5
CCDC188-201ENST00000439765 C10orf126Q8N4M7 172 aa11.94□□□□□ -0.5
CCDC188-201ENST00000439765 KIR2DL4Q99706 377 aa11.94□□□□□ -0.5
CCDC188-201ENST00000439765 K7EP13 123 aa11.93□□□□□ -0.5
CCDC188-201ENST00000439765 COTL1Q14019 142 aa11.93□□□□□ -0.5
CCDC188-201ENST00000439765 Q6ZRN7 208 aaPredicted RBP11.93□□□□□ -0.5
CCDC188-201ENST00000439765 DEFB104AQ8WTQ1 72 aa11.93□□□□□ -0.5
CCDC188-201ENST00000439765 TSHBP01222 138 aa11.92□□□□□ -0.5
CCDC188-201ENST00000439765 BTF3P20290 206 aaKnown RBP11.92□□□□□ -0.5
CCDC188-201ENST00000439765 RAB5BP61020 215 aa11.92□□□□□ -0.5
CCDC188-201ENST00000439765 TMEM97Q5BJF2 176 aa11.92□□□□□ -0.5
CCDC188-201ENST00000439765 NIT1Q86X76 327 aa11.92□□□□□ -0.5
CCDC188-201ENST00000439765 TCAPO15273 167 aa11.91□□□□□ -0.5
CCDC188-201ENST00000439765 NTM-AS1Q6ZSK4 140 aa11.91□□□□□ -0.5
CCDC188-201ENST00000439765 BAGE3Q86Y29 109 aa11.91□□□□□ -0.5
CCDC188-201ENST00000439765 URB1-AS1Q96HZ7 61 aa11.91□□□□□ -0.5
CCDC188-201ENST00000439765 LINC01546A6NGU7 62 aa11.9□□□□□ -0.5
CCDC188-201ENST00000439765 K7EMI3 77 aa11.9□□□□□ -0.5
CCDC188-201ENST00000439765 LINC00614P0C842 121 aa11.9□□□□□ -0.5
CCDC188-201ENST00000439765 FCER1GP30273 86 aa11.9□□□□□ -0.5
CCDC188-201ENST00000439765 FA2HQ7L5A8 372 aa11.9□□□□□ -0.5
CCDC188-201ENST00000439765 Q9HAA7 133 aa11.9□□□□□ -0.5
CCDC188-201ENST00000439765 TRBV6-8A0A0A6YYG3 113 aa11.89□□□□□ -0.51
CCDC188-201ENST00000439765 LAGE3Q14657 143 aa11.89□□□□□ -0.51
CCDC188-201ENST00000439765 NFE4Q86UQ8 179 aa11.89□□□□□ -0.51
CCDC188-201ENST00000439765 LRP1BQ9NZR2 4599 aa11.88□□□□□ -0.51
CCDC188-201ENST00000439765 TRBV25-1A0A075B6N4 114 aa11.88□□□□□ -0.51
CCDC188-201ENST00000439765 IGHV1-24A0A0C4DH33 117 aa11.88□□□□□ -0.51
CCDC188-201ENST00000439765 C16orf90A8MZG2 172 aa11.88□□□□□ -0.51
CCDC188-201ENST00000439765 IBA57-AS1B1ANH7 110 aa11.88□□□□□ -0.51
CCDC188-201ENST00000439765 AMTP48728 403 aa11.88□□□□□ -0.51
CCDC188-201ENST00000439765 CHCHD1Q96BP2 118 aaKnown RBP11.88□□□□□ -0.51
CCDC188-201ENST00000439765 AP5S1Q9NUS5 200 aa11.88□□□□□ -0.51
CCDC188-201ENST00000439765 ESDP10768 282 aa11.87□□□□□ -0.51
CCDC188-201ENST00000439765 ORMDL2Q53FV1 153 aa11.87□□□□□ -0.51
CCDC188-201ENST00000439765 RNASEKQ6P5S7 137 aaKnown RBP11.87□□□□□ -0.51
CCDC188-201ENST00000439765 CHCHD7Q9BUK0 85 aa11.87□□□□□ -0.51
CCDC188-201ENST00000439765 HSPG2P98160 4391 aa11.86□□□□□ -0.51
CCDC188-201ENST00000439765 A0A087WX48 190 aa11.86□□□□□ -0.51
CCDC188-201ENST00000439765 NDUFA6P56556 154 aa11.86□□□□□ -0.51
CCDC188-201ENST00000439765 LINC00310P59036 64 aa11.86□□□□□ -0.51
CCDC188-201ENST00000439765 CHCHD5Q9BSY4 110 aa11.86□□□□□ -0.51
CCDC188-201ENST00000439765 SERF1AO75920 110 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms