RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 RPL39LQ96EH5 51 aaKnown RBP6.94□□□□□ -1.3
MCF2L-216ENST00000439475 MRAP2Q96G30 205 aa6.94□□□□□ -1.3
MCF2L-216ENST00000439475 ST20Q9HBF5 79 aa6.94□□□□□ -1.3
MCF2L-216ENST00000439475 TRAV8-4A0A0B4J246 113 aa6.93□□□□□ -1.3
MCF2L-216ENST00000439475 TRBV6-5A0A0K0K1A5 114 aa6.93□□□□□ -1.3
MCF2L-216ENST00000439475 SDHAF1A6NFY7 115 aa6.93□□□□□ -1.3
MCF2L-216ENST00000439475 H7C423 109 aa6.93□□□□□ -1.3
MCF2L-216ENST00000439475 PPP1R2P9O14990 202 aa6.93□□□□□ -1.3
MCF2L-216ENST00000439475 APCSP02743 223 aa6.93□□□□□ -1.3
MCF2L-216ENST00000439475 S100A8P05109 93 aa6.93□□□□□ -1.3
MCF2L-216ENST00000439475 RAB4AP20338 218 aa6.93□□□□□ -1.3
MCF2L-216ENST00000439475 AMMECR1LQ6DCA0 310 aa6.93□□□□□ -1.3
MCF2L-216ENST00000439475 LINC00269Q8N2A0 174 aa6.93□□□□□ -1.3
MCF2L-216ENST00000439475 MAPKAPK5-AS1Q8N8E1 139 aa6.93□□□□□ -1.3
MCF2L-216ENST00000439475 PRR34Q9NV39 138 aa6.93□□□□□ -1.3
MCF2L-216ENST00000439475 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.92□□□□□ -1.3
MCF2L-216ENST00000439475 SMIM27A0A1W2PRY6 76 aa6.92□□□□□ -1.3
MCF2L-216ENST00000439475 LECT2O14960 151 aa6.92□□□□□ -1.3
MCF2L-216ENST00000439475 KRTAP10-1P60331 282 aa6.92□□□□□ -1.3
MCF2L-216ENST00000439475 REG3AQ06141 175 aa6.92□□□□□ -1.3
MCF2L-216ENST00000439475 PNRC1Q12796 327 aaPredicted RBP6.92□□□□□ -1.3
MCF2L-216ENST00000439475 AMN1Q8IY45 258 aa6.92□□□□□ -1.3
MCF2L-216ENST00000439475 C20orf203Q8NBC4 194 aa6.92□□□□□ -1.3
MCF2L-216ENST00000439475 BTF3L4Q96K17 158 aa6.92□□□□□ -1.3
MCF2L-216ENST00000439475 LRP1BQ9NZR2 4599 aa6.91□□□□□ -1.3
MCF2L-216ENST00000439475 VCYO14598 125 aa6.91□□□□□ -1.3
MCF2L-216ENST00000439475 CAMPP49913 170 aa6.91□□□□□ -1.3
MCF2L-216ENST00000439475 CLLU1Q5K131 121 aa6.91□□□□□ -1.3
MCF2L-216ENST00000439475 CLPSL2Q6UWE3 100 aa6.91□□□□□ -1.3
MCF2L-216ENST00000439475 DEFB104AQ8WTQ1 72 aa6.91□□□□□ -1.3
MCF2L-216ENST00000439475 RNF185Q96GF1 192 aa6.91□□□□□ -1.3
MCF2L-216ENST00000439475 TMEM70Q9BUB7 260 aa6.91□□□□□ -1.3
MCF2L-216ENST00000439475 LINC00862A6NCI5 91 aa6.9□□□□□ -1.3
MCF2L-216ENST00000439475 F8W036 122 aa6.9□□□□□ -1.3
MCF2L-216ENST00000439475 HLA-DQA1P01909 254 aa6.9□□□□□ -1.3
MCF2L-216ENST00000439475 SMAGPQ0VAQ4 97 aa6.9□□□□□ -1.3
MCF2L-216ENST00000439475 WFDC2Q14508 124 aa6.9□□□□□ -1.3
MCF2L-216ENST00000439475 FAM104BQ5XKR9 115 aa6.9□□□□□ -1.3
MCF2L-216ENST00000439475 RNASEKQ6P5S7 137 aaKnown RBP6.9□□□□□ -1.3
MCF2L-216ENST00000439475 Q8N1X5 172 aa6.9□□□□□ -1.3
MCF2L-216ENST00000439475 ANAPC16Q96DE5 110 aa6.9□□□□□ -1.3
MCF2L-216ENST00000439475 TMEM101Q96IK0 257 aa6.9□□□□□ -1.3
MCF2L-216ENST00000439475 KIAA1109Q2LD37 5005 aa6.9□□□□□ -1.31
MCF2L-216ENST00000439475 IGLV4-60A0A075B6I1 120 aa6.89□□□□□ -1.31
MCF2L-216ENST00000439475 MT-ND4LP03901 98 aa6.89□□□□□ -1.31
MCF2L-216ENST00000439475 ZNF25P17030 456 aaPredicted RBP6.89□□□□□ -1.31
MCF2L-216ENST00000439475 CKS2P33552 79 aa6.89□□□□□ -1.31
MCF2L-216ENST00000439475 POLR2KP53803 58 aaKnown RBP6.89□□□□□ -1.31
MCF2L-216ENST00000439475 CLRN3Q8NCR9 226 aa6.89□□□□□ -1.31
MCF2L-216ENST00000439475 KIR2DL4Q99706 377 aa6.89□□□□□ -1.31
MCF2L-216ENST00000439475 PKHD1P08F94 4074 aa6.88□□□□□ -1.31
MCF2L-216ENST00000439475 IGLV10-54A0A075B6I4 117 aa6.88□□□□□ -1.31
MCF2L-216ENST00000439475 TRBV27A0A0K0K1C4 114 aa6.88□□□□□ -1.31
MCF2L-216ENST00000439475 FGF6P10767 208 aa6.88□□□□□ -1.31
MCF2L-216ENST00000439475 FCER1GP30273 86 aa6.88□□□□□ -1.31
MCF2L-216ENST00000439475 XGP55808 180 aa6.88□□□□□ -1.31
MCF2L-216ENST00000439475 SUMO2P61956 95 aaKnown RBP6.88□□□□□ -1.31
MCF2L-216ENST00000439475 HBBP68871 147 aa6.88□□□□□ -1.31
MCF2L-216ENST00000439475 MRPL54Q6P161 138 aaKnown RBP6.88□□□□□ -1.31
MCF2L-216ENST00000439475 TMEM18Q96B42 140 aa6.88□□□□□ -1.31
MCF2L-216ENST00000439475 DNAH5Q8TE73 4624 aa6.88□□□□□ -1.31
MCF2L-216ENST00000439475 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.87□□□□□ -1.31
MCF2L-216ENST00000439475 IGKV3OR2-268A0A0C4DH90 116 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 IGKV2-29A2NJV5 120 aaPredicted RBP6.87□□□□□ -1.31
MCF2L-216ENST00000439475 EPM2AB3EWF7 344 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 USP17L23D6RBM5 183 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 TCAPO15273 167 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 GAS8-AS1O95177 125 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 ESDP10768 282 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 RPS10P46783 165 aaKnown RBP6.87□□□□□ -1.31
MCF2L-216ENST00000439475 MRPL51Q4U2R6 128 aaKnown RBP6.87□□□□□ -1.31
MCF2L-216ENST00000439475 DGAT2L7PQ6IED9 249 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 CFAP161Q6P656 301 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 UQCC3Q6UW78 93 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 ATP5L2Q7Z4Y8 100 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 C20orf78Q9BR46 151 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 TMEM242Q9NWH2 141 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 HERC2O95714 4834 aa6.87□□□□□ -1.31
MCF2L-216ENST00000439475 C7orf77A4D0Y5 90 aa6.86□□□□□ -1.31
MCF2L-216ENST00000439475 SMKR1H3BMG3 65 aa6.86□□□□□ -1.31
MCF2L-216ENST00000439475 PPBPP02775 128 aa6.86□□□□□ -1.31
MCF2L-216ENST00000439475 OR5A1Q8NGJ0 315 aa6.86□□□□□ -1.31
MCF2L-216ENST00000439475 AP5S1Q9NUS5 200 aa6.86□□□□□ -1.31
MCF2L-216ENST00000439475 TRBV24-1A0A075B6N3 115 aa6.85□□□□□ -1.31
MCF2L-216ENST00000439475 FAM229AH3BQW9 127 aa6.85□□□□□ -1.31
MCF2L-216ENST00000439475 PHOX2AO14813 284 aa6.85□□□□□ -1.31
MCF2L-216ENST00000439475 TSHBP01222 138 aa6.85□□□□□ -1.31
MCF2L-216ENST00000439475 KRTAP26-1Q6PEX3 210 aa6.85□□□□□ -1.31
MCF2L-216ENST00000439475 NRACQ8N912 160 aa6.85□□□□□ -1.31
MCF2L-216ENST00000439475 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.31
MCF2L-216ENST00000439475 A0A1B0GXF2 115 aa6.84□□□□□ -1.31
MCF2L-216ENST00000439475 TNFRSF6BO95407 300 aa6.84□□□□□ -1.31
MCF2L-216ENST00000439475 RPL32P62910 135 aaKnown RBP6.84□□□□□ -1.31
MCF2L-216ENST00000439475 SS18Q15532 418 aa6.84□□□□□ -1.31
MCF2L-216ENST00000439475 hDV102S1A0JD36 115 aa6.83□□□□□ -1.32
MCF2L-216ENST00000439475 TMEM218A2RU14 115 aa6.83□□□□□ -1.32
MCF2L-216ENST00000439475 GAGE12HA6NDE8 117 aa6.83□□□□□ -1.32
MCF2L-216ENST00000439475 D6R8Y8 96 aa6.83□□□□□ -1.32
MCF2L-216ENST00000439475 PRSS1P07477 247 aa6.83□□□□□ -1.32
MCF2L-216ENST00000439475 IFITM2Q01629 132 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms