RNA–Protein interactions for RNA: ENST00000430278.5

LMBR1-205, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-205ENST00000430278 RPS20P60866 119 aaKnown RBP12.96□□□□□ -0.33
LMBR1-205ENST00000430278 GTSF1Q8WW33 167 aa12.96□□□□□ -0.33
LMBR1-205ENST00000430278 NDUFS6O75380 124 aaKnown RBP12.95□□□□□ -0.34
LMBR1-205ENST00000430278 AMTP48728 403 aa12.95□□□□□ -0.34
LMBR1-205ENST00000430278 MAJINQ3KP22 176 aa12.95□□□□□ -0.34
LMBR1-205ENST00000430278 PRSS3P2Q8NHM4 247 aa12.95□□□□□ -0.34
LMBR1-205ENST00000430278 RNF213Q63HN8 5207 aa12.95□□□□□ -0.34
LMBR1-205ENST00000430278 PRR3P79522 188 aaKnown RBP12.94□□□□□ -0.34
LMBR1-205ENST00000430278 COTL1Q14019 142 aa12.94□□□□□ -0.34
LMBR1-205ENST00000430278 C11orf52Q96A22 123 aa12.94□□□□□ -0.34
LMBR1-205ENST00000430278 IGKV2-24A0A0C4DH68 120 aa12.93□□□□□ -0.34
LMBR1-205ENST00000430278 C19orf71A6NCJ1 209 aa12.93□□□□□ -0.34
LMBR1-205ENST00000430278 F2Z2F3 143 aa12.93□□□□□ -0.34
LMBR1-205ENST00000430278 SMLR1H3BR10 107 aa12.93□□□□□ -0.34
LMBR1-205ENST00000430278 TRGC1P0CF51 173 aa12.93□□□□□ -0.34
LMBR1-205ENST00000430278 ZNF345Q14585 488 aa12.93□□□□□ -0.34
LMBR1-205ENST00000430278 HIGD2BQ4VC39 106 aa12.93□□□□□ -0.34
LMBR1-205ENST00000430278 CENPWQ5EE01 88 aa12.93□□□□□ -0.34
LMBR1-205ENST00000430278 IGKV3OR2-268A0A0C4DH90 116 aa12.92□□□□□ -0.34
LMBR1-205ENST00000430278 ODF1Q14990 250 aa12.92□□□□□ -0.34
LMBR1-205ENST00000430278 STPG4Q8N801 248 aa12.92□□□□□ -0.34
LMBR1-205ENST00000430278 NTF3P20783 257 aa12.91□□□□□ -0.34
LMBR1-205ENST00000430278 LYZL1Q6UWQ5 148 aa12.91□□□□□ -0.34
LMBR1-205ENST00000430278 XKRY2A2RUG3 117 aa12.9□□□□□ -0.34
LMBR1-205ENST00000430278 CCL20P78556 96 aa12.9□□□□□ -0.34
LMBR1-205ENST00000430278 LYPD6BQ8NI32 183 aa12.9□□□□□ -0.34
LMBR1-205ENST00000430278 MANBALQ9NQG1 85 aa12.9□□□□□ -0.34
LMBR1-205ENST00000430278 GNG13Q9P2W3 67 aa12.9□□□□□ -0.34
LMBR1-205ENST00000430278 GVQW2A0A096LPI5 108 aaPredicted RBP12.89□□□□□ -0.35
LMBR1-205ENST00000430278 A0A0J9YXV3 536 aa12.89□□□□□ -0.35
LMBR1-205ENST00000430278 IFNA1P01562 189 aa12.89□□□□□ -0.35
LMBR1-205ENST00000430278 CHCHD10Q8WYQ3 142 aaPredicted RBP12.89□□□□□ -0.35
LMBR1-205ENST00000430278 RAB19A4D1S5 217 aa12.88□□□□□ -0.35
LMBR1-205ENST00000430278 GNG4P50150 75 aa12.88□□□□□ -0.35
LMBR1-205ENST00000430278 C9orf62Q8N4C0 152 aa12.88□□□□□ -0.35
LMBR1-205ENST00000430278 SMIM12Q96EX1 92 aa12.88□□□□□ -0.35
LMBR1-205ENST00000430278 A0A096LNI7 61 aa12.87□□□□□ -0.35
LMBR1-205ENST00000430278 KRTAP10-8P60410 259 aa12.87□□□□□ -0.35
LMBR1-205ENST00000430278 AMMECR1LQ6DCA0 310 aa12.87□□□□□ -0.35
LMBR1-205ENST00000430278 BCL2L11O43521 198 aa12.86□□□□□ -0.35
LMBR1-205ENST00000430278 SPINK6Q6UWN8 80 aa12.86□□□□□ -0.35
LMBR1-205ENST00000430278 GATD1Q8NB37 220 aa12.86□□□□□ -0.35
LMBR1-205ENST00000430278 KANTRA0A1W2PQU2 76 aa12.85□□□□□ -0.35
LMBR1-205ENST00000430278 HMSDA8MTL9 139 aa12.85□□□□□ -0.35
LMBR1-205ENST00000430278 Q6ZNX1 250 aa12.85□□□□□ -0.35
LMBR1-205ENST00000430278 TRAV1-1A0A0B4J248 108 aa12.84□□□□□ -0.35
LMBR1-205ENST00000430278 TRAV26-2A0A0B4J265 109 aa12.84□□□□□ -0.35
LMBR1-205ENST00000430278 CTRLP40313 264 aa12.84□□□□□ -0.35
LMBR1-205ENST00000430278 TWIST1Q15672 202 aa12.84□□□□□ -0.35
LMBR1-205ENST00000430278 RNASEKQ6P5S7 137 aaKnown RBP12.84□□□□□ -0.35
LMBR1-205ENST00000430278 REG3GQ6UW15 175 aa12.84□□□□□ -0.35
LMBR1-205ENST00000430278 TRBV20OR9-2A0A075B6H5 130 aa12.83□□□□□ -0.36
LMBR1-205ENST00000430278 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.83□□□□□ -0.36
LMBR1-205ENST00000430278 IGKV2-29A2NJV5 120 aaPredicted RBP12.83□□□□□ -0.36
LMBR1-205ENST00000430278 H7C423 109 aa12.83□□□□□ -0.36
LMBR1-205ENST00000430278 NCR2O95944 276 aa12.83□□□□□ -0.36
LMBR1-205ENST00000430278 EIF5AP63241 154 aaKnown RBP12.83□□□□□ -0.36
LMBR1-205ENST00000430278 FOXI1Q12951 378 aa12.83□□□□□ -0.36
LMBR1-205ENST00000430278 CNFNQ9BYD5 112 aa12.83□□□□□ -0.36
LMBR1-205ENST00000430278 BIN3Q9NQY0 253 aa12.83□□□□□ -0.36
LMBR1-205ENST00000430278 LINC00474Q9P2X8 69 aa12.83□□□□□ -0.36
LMBR1-205ENST00000430278 hCG_2014768A0A024R1R8 64 aa12.82□□□□□ -0.36
LMBR1-205ENST00000430278 FGF6P10767 208 aa12.82□□□□□ -0.36
LMBR1-205ENST00000430278 SRSF9Q13242 221 aaKnown RBP eCLIP12.82□□□□□ -0.36
LMBR1-205ENST00000430278 NUDT10Q8NFP7 164 aa12.82□□□□□ -0.36
LMBR1-205ENST00000430278 NUDT11Q96G61 164 aa12.82□□□□□ -0.36
LMBR1-205ENST00000430278 RPL39LQ96EH5 51 aaKnown RBP12.81□□□□□ -0.36
LMBR1-205ENST00000430278 PDE6DO43924 150 aa12.8□□□□□ -0.36
LMBR1-205ENST00000430278 APCSP02743 223 aa12.8□□□□□ -0.36
LMBR1-205ENST00000430278 MEF2BQ02080 365 aaPredicted RBP12.8□□□□□ -0.36
LMBR1-205ENST00000430278 MED9Q9NWA0 146 aa12.8□□□□□ -0.36
LMBR1-205ENST00000430278 PKIGQ9Y2B9 76 aa12.8□□□□□ -0.36
LMBR1-205ENST00000430278 XCL1P47992 114 aa12.79□□□□□ -0.36
LMBR1-205ENST00000430278 OR5A1Q8NGJ0 315 aa12.79□□□□□ -0.36
LMBR1-205ENST00000430278 LINC00526Q96FQ7 95 aa12.79□□□□□ -0.36
LMBR1-205ENST00000430278 TEX46H3BTG2 121 aa12.78□□□□□ -0.36
LMBR1-205ENST00000430278 Q6ZRP5 223 aa12.78□□□□□ -0.36
LMBR1-205ENST00000430278 IGHV1-58A0A0C4DH39 117 aa12.77□□□□□ -0.37
LMBR1-205ENST00000430278 SDHAF1A6NFY7 115 aa12.77□□□□□ -0.37
LMBR1-205ENST00000430278 ZNF25P17030 456 aaPredicted RBP12.77□□□□□ -0.37
LMBR1-205ENST00000430278 CARD19Q96LW7 228 aa12.77□□□□□ -0.37
LMBR1-205ENST00000430278 LINC00959A0A1B0GUT2 108 aa12.76□□□□□ -0.37
LMBR1-205ENST00000430278 CCL25O15444 150 aa12.76□□□□□ -0.37
LMBR1-205ENST00000430278 FOXA3P55318 350 aaPredicted RBP12.76□□□□□ -0.37
LMBR1-205ENST00000430278 TEX261Q6UWH6 196 aa12.76□□□□□ -0.37
LMBR1-205ENST00000430278 AKAP14Q86UN6 197 aa12.76□□□□□ -0.37
LMBR1-205ENST00000430278 RPP21Q9H633 154 aaKnown RBP12.76□□□□□ -0.37
LMBR1-205ENST00000430278 FAM231BA6NCW3 169 aa12.75□□□□□ -0.37
LMBR1-205ENST00000430278 TMEM101Q96IK0 257 aa12.75□□□□□ -0.37
LMBR1-205ENST00000430278 BTF3L4Q96K17 158 aa12.75□□□□□ -0.37
LMBR1-205ENST00000430278 RNASE7Q9H1E1 156 aaKnown RBP12.75□□□□□ -0.37
LMBR1-205ENST00000430278 I3L3M4 83 aa12.74□□□□□ -0.37
LMBR1-205ENST00000430278 SMIM15Q7Z3B0 74 aa12.74□□□□□ -0.37
LMBR1-205ENST00000430278 BCL2P10415 239 aa12.73□□□□□ -0.37
LMBR1-205ENST00000430278 PMCHP20382 165 aa12.73□□□□□ -0.37
LMBR1-205ENST00000430278 SYCNQ0VAF6 134 aa12.73□□□□□ -0.37
LMBR1-205ENST00000430278 ZNF561-AS1K7EIQ3 104 aa12.72□□□□□ -0.37
LMBR1-205ENST00000430278 K7EN84 100 aa12.72□□□□□ -0.37
LMBR1-205ENST00000430278 TRBV6-5A0A0K0K1A5 114 aa12.71□□□□□ -0.37
LMBR1-205ENST00000430278 GAS8-AS1O95177 125 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms