RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 ZNF876PQ49A33 203 aa11.48□□□□□ -0.57
TVP23C-203ENST00000428082 PIK3CD-AS1Q5SR53 167 aa11.48□□□□□ -0.57
TVP23C-203ENST00000428082 SCGB1D4Q6XE38 83 aa11.48□□□□□ -0.57
TVP23C-203ENST00000428082 ZNF479Q96JC4 524 aa11.48□□□□□ -0.57
TVP23C-203ENST00000428082 IGLV4-69A0A075B6H9 119 aa11.47□□□□□ -0.57
TVP23C-203ENST00000428082 PCP4P48539 62 aa11.47□□□□□ -0.57
TVP23C-203ENST00000428082 ANK2Q01484 3957 aa11.47□□□□□ -0.57
TVP23C-203ENST00000428082 WFDC9Q8NEX5 89 aa11.47□□□□□ -0.57
TVP23C-203ENST00000428082 NOTCH3Q9UM47 2321 aa11.46□□□□□ -0.57
TVP23C-203ENST00000428082 IGLV1-51P01701 117 aa11.46□□□□□ -0.58
TVP23C-203ENST00000428082 PTH2Q96A98 100 aa11.46□□□□□ -0.58
TVP23C-203ENST00000428082 RPL39P62891 51 aaKnown RBP11.45□□□□□ -0.58
TVP23C-203ENST00000428082 SORL1Q92673 2214 aa11.45□□□□□ -0.58
TVP23C-203ENST00000428082 SRSF9Q13242 221 aaKnown RBP eCLIP11.45□□□□□ -0.58
TVP23C-203ENST00000428082 RRN3P1Q2M238 152 aa11.45□□□□□ -0.58
TVP23C-203ENST00000428082 MORN3Q6PF18 240 aaPredicted RBP11.45□□□□□ -0.58
TVP23C-203ENST00000428082 NFE4Q86UQ8 179 aa11.45□□□□□ -0.58
TVP23C-203ENST00000428082 A8MWV9 139 aa11.44□□□□□ -0.58
TVP23C-203ENST00000428082 F8W1H4 67 aa11.44□□□□□ -0.58
TVP23C-203ENST00000428082 DEFB131AP59861 70 aa11.44□□□□□ -0.58
TVP23C-203ENST00000428082 C20orf203Q8NBC4 194 aa11.44□□□□□ -0.58
TVP23C-203ENST00000428082 H3BMM0 161 aa11.43□□□□□ -0.58
TVP23C-203ENST00000428082 ZNF415Q09FC8 603 aa11.43□□□□□ -0.58
TVP23C-203ENST00000428082 TMEM170BQ5T4T1 132 aa11.43□□□□□ -0.58
TVP23C-203ENST00000428082 C9orf66Q5T8R8 295 aa11.43□□□□□ -0.58
TVP23C-203ENST00000428082 SPAG8Q99932 426 aaPredicted RBP11.43□□□□□ -0.58
TVP23C-203ENST00000428082 SPANXB1Q9NS25 103 aaPredicted RBP11.43□□□□□ -0.58
TVP23C-203ENST00000428082 TRAV25A0A0B4J276 109 aa11.43□□□□□ -0.58
TVP23C-203ENST00000428082 G3V4G9 280 aa11.43□□□□□ -0.58
TVP23C-203ENST00000428082 CRYBA4P53673 196 aa11.43□□□□□ -0.58
TVP23C-203ENST00000428082 LINC00467Q9BRT7 94 aa11.43□□□□□ -0.58
TVP23C-203ENST00000428082 PKD1L1Q8TDX9 2849 aa11.42□□□□□ -0.58
TVP23C-203ENST00000428082 KNCNA6PVL3 124 aa11.42□□□□□ -0.58
TVP23C-203ENST00000428082 M0R2P5 195 aa11.42□□□□□ -0.58
TVP23C-203ENST00000428082 INSL3P51460 131 aa11.42□□□□□ -0.58
TVP23C-203ENST00000428082 LGALS3P17931 250 aaKnown RBP11.41□□□□□ -0.58
TVP23C-203ENST00000428082 LYRM7Q5U5X0 104 aa11.41□□□□□ -0.58
TVP23C-203ENST00000428082 PYGO1Q9Y3Y4 419 aa11.41□□□□□ -0.58
TVP23C-203ENST00000428082 CMYA5Q8N3K9 4069 aa11.4□□□□□ -0.58
TVP23C-203ENST00000428082 A0A0J9YY99 117 aa11.4□□□□□ -0.58
TVP23C-203ENST00000428082 RHODO00212 210 aa11.4□□□□□ -0.58
TVP23C-203ENST00000428082 LEPROTO15243 131 aa11.4□□□□□ -0.58
TVP23C-203ENST00000428082 VCX2Q9H322 139 aa11.4□□□□□ -0.58
TVP23C-203ENST00000428082 P0DMU3 169 aa11.39□□□□□ -0.59
TVP23C-203ENST00000428082 FAM231AP0DMU4 169 aa11.39□□□□□ -0.59
TVP23C-203ENST00000428082 FAM231CP0DMU5 169 aa11.39□□□□□ -0.59
TVP23C-203ENST00000428082 ZNRF2Q8NHG8 242 aa11.39□□□□□ -0.59
TVP23C-203ENST00000428082 PLEKHB2Q96CS7 222 aa11.39□□□□□ -0.59
TVP23C-203ENST00000428082 CLUHP3Q96NS8 147 aa11.39□□□□□ -0.59
TVP23C-203ENST00000428082 SPXQ9BT56 116 aa11.39□□□□□ -0.59
TVP23C-203ENST00000428082 TNFRSF18Q9Y5U5 241 aa11.39□□□□□ -0.59
TVP23C-203ENST00000428082 J3QQQ9 107 aa11.39□□□□□ -0.59
TVP23C-203ENST00000428082 UBE2D1P51668 147 aa11.39□□□□□ -0.59
TVP23C-203ENST00000428082 EMP1P54849 157 aa11.39□□□□□ -0.59
TVP23C-203ENST00000428082 J3QR89 54 aa11.38□□□□□ -0.59
TVP23C-203ENST00000428082 RBMY1A1P0DJD3 496 aaKnown RBP11.38□□□□□ -0.59
TVP23C-203ENST00000428082 RBMY1CP0DJD4 496 aa11.38□□□□□ -0.59
TVP23C-203ENST00000428082 RBMY1FQ15415 496 aaKnown RBP11.38□□□□□ -0.59
TVP23C-203ENST00000428082 SLC25A29Q8N8R3 303 aa11.38□□□□□ -0.59
TVP23C-203ENST00000428082 DNAJC30Q96LL9 226 aa11.38□□□□□ -0.59
TVP23C-203ENST00000428082 MRPL16Q9NX20 251 aaKnown RBP11.38□□□□□ -0.59
TVP23C-203ENST00000428082 TMEM223A0PJW6 202 aa11.37□□□□□ -0.59
TVP23C-203ENST00000428082 INSP01308 110 aa11.37□□□□□ -0.59
TVP23C-203ENST00000428082 OXLD1Q5BKU9 147 aa11.37□□□□□ -0.59
TVP23C-203ENST00000428082 MAP6D1Q9H9H5 199 aa11.37□□□□□ -0.59
TVP23C-203ENST00000428082 IGLV4-3A0A075B6K6 122 aa11.37□□□□□ -0.59
TVP23C-203ENST00000428082 WIPF1O43516 503 aa11.37□□□□□ -0.59
TVP23C-203ENST00000428082 BEAN1Q3B7T3 259 aa11.37□□□□□ -0.59
TVP23C-203ENST00000428082 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
TVP23C-203ENST00000428082 HTN1P15515 57 aa11.36□□□□□ -0.59
TVP23C-203ENST00000428082 RPL24P83731 157 aaKnown RBP11.36□□□□□ -0.59
TVP23C-203ENST00000428082 ODF3L2Q3SX64 289 aa11.36□□□□□ -0.59
TVP23C-203ENST00000428082 GAGE13Q4V321 117 aa11.36□□□□□ -0.59
TVP23C-203ENST00000428082 AGRNO00468 2067 aa11.35□□□□□ -0.59
TVP23C-203ENST00000428082 KRTAP21-3Q3LHN1 58 aa11.35□□□□□ -0.59
TVP23C-203ENST00000428082 DEFB104AQ8WTQ1 72 aa11.35□□□□□ -0.59
TVP23C-203ENST00000428082 LINC01587Q99440 93 aa11.35□□□□□ -0.59
TVP23C-203ENST00000428082 RBMY1BA6NDE4 496 aaKnown RBP11.35□□□□□ -0.59
TVP23C-203ENST00000428082 RBMY1EA6NEQ0 496 aaKnown RBP11.35□□□□□ -0.59
TVP23C-203ENST00000428082 RBMY1DP0C7P1 496 aaKnown RBP11.35□□□□□ -0.59
TVP23C-203ENST00000428082 IGHV3-30P01768 117 aa11.34□□□□□ -0.59
TVP23C-203ENST00000428082 IGHV3-30-5P0DP03 117 aa11.34□□□□□ -0.59
TVP23C-203ENST00000428082 ZNF22P17026 224 aaPredicted RBP11.34□□□□□ -0.59
TVP23C-203ENST00000428082 AMELXQ99217 191 aa11.34□□□□□ -0.59
TVP23C-203ENST00000428082 SPANXA1Q9NS26 97 aa11.34□□□□□ -0.59
TVP23C-203ENST00000428082 H3BMG7 143 aa11.33□□□□□ -0.6
TVP23C-203ENST00000428082 COTL1Q14019 142 aa11.33□□□□□ -0.6
TVP23C-203ENST00000428082 TSPEAR-AS2P59090 65 aa11.33□□□□□ -0.6
TVP23C-203ENST00000428082 CFAP126Q5VTH2 177 aa11.33□□□□□ -0.6
TVP23C-203ENST00000428082 OPRPNQ99935 248 aaPredicted RBP11.33□□□□□ -0.6
TVP23C-203ENST00000428082 WFDC10AQ9H1F0 79 aa11.32□□□□□ -0.6
TVP23C-203ENST00000428082 C19orf73Q9NVV2 129 aa11.32□□□□□ -0.6
TVP23C-203ENST00000428082 IGHV3-73A0A0B4J1V6 119 aa11.31□□□□□ -0.6
TVP23C-203ENST00000428082 TMEM238C9JI98 176 aa11.31□□□□□ -0.6
TVP23C-203ENST00000428082 IGHV3-53P01767 116 aa11.31□□□□□ -0.6
TVP23C-203ENST00000428082 CMC4P56277 68 aaPredicted RBP11.31□□□□□ -0.6
TVP23C-203ENST00000428082 MRPS36P82909 103 aaKnown RBP11.31□□□□□ -0.6
TVP23C-203ENST00000428082 A0A0J9YXV3 536 aa11.31□□□□□ -0.6
TVP23C-203ENST00000428082 TEX48A0A1B0GUV7 120 aa11.31□□□□□ -0.6
TVP23C-203ENST00000428082 RS1O15537 224 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms