RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 COX6CP09669 75 aa8.37□□□□□ -1.07
SEC61A1-202ENST00000424880 PRORYQ9H606 182 aa8.37□□□□□ -1.07
SEC61A1-202ENST00000424880 SDIM1Q6ZPB5 146 aa8.37□□□□□ -1.07
SEC61A1-202ENST00000424880 TIMM21Q9BVV7 248 aa8.37□□□□□ -1.07
SEC61A1-202ENST00000424880 KIF25-AS1Q9Y6Z4 181 aa8.37□□□□□ -1.07
SEC61A1-202ENST00000424880 TRAV13-1A0A0B4J241 112 aa8.37□□□□□ -1.07
SEC61A1-202ENST00000424880 GRNP28799 593 aaKnown RBP8.37□□□□□ -1.07
SEC61A1-202ENST00000424880 KLRB1Q12918 225 aa8.37□□□□□ -1.07
SEC61A1-202ENST00000424880 LITAFQ99732 161 aa8.37□□□□□ -1.07
SEC61A1-202ENST00000424880 ITPR1Q14643 2758 aa8.36□□□□□ -1.07
SEC61A1-202ENST00000424880 COX7CP15954 63 aa8.36□□□□□ -1.07
SEC61A1-202ENST00000424880 PROK1P58294 105 aa8.36□□□□□ -1.07
SEC61A1-202ENST00000424880 Q8N9W7 124 aa8.36□□□□□ -1.07
SEC61A1-202ENST00000424880 TMEM141Q96I45 108 aa8.36□□□□□ -1.07
SEC61A1-202ENST00000424880 NDUFA12Q9UI09 145 aa8.36□□□□□ -1.07
SEC61A1-202ENST00000424880 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.36□□□□□ -1.07
SEC61A1-202ENST00000424880 HOXD3P31249 432 aaPredicted RBP8.36□□□□□ -1.07
SEC61A1-202ENST00000424880 C2orf48Q96LS8 159 aa8.36□□□□□ -1.07
SEC61A1-202ENST00000424880 CELSR2Q9HCU4 2923 aa8.36□□□□□ -1.07
SEC61A1-202ENST00000424880 M0R1W7 72 aa8.35□□□□□ -1.07
SEC61A1-202ENST00000424880 TIMM17AQ99595 171 aa8.35□□□□□ -1.07
SEC61A1-202ENST00000424880 A0A0J9YX75 114 aa8.35□□□□□ -1.07
SEC61A1-202ENST00000424880 PPP1R17O96001 155 aa8.35□□□□□ -1.07
SEC61A1-202ENST00000424880 Q8N2B8 174 aa8.35□□□□□ -1.07
SEC61A1-202ENST00000424880 CSPG4Q6UVK1 2322 aa8.35□□□□□ -1.07
SEC61A1-202ENST00000424880 LST1O00453 97 aa8.35□□□□□ -1.07
SEC61A1-202ENST00000424880 CXCL5P42830 114 aa8.35□□□□□ -1.07
SEC61A1-202ENST00000424880 LINC00643Q86TS7 51 aa8.35□□□□□ -1.07
SEC61A1-202ENST00000424880 GAGE2AQ6NT46 116 aa8.34□□□□□ -1.07
SEC61A1-202ENST00000424880 C5orf38Q86SI9 138 aa8.34□□□□□ -1.07
SEC61A1-202ENST00000424880 Q9HAA7 133 aa8.34□□□□□ -1.07
SEC61A1-202ENST00000424880 USP24Q9UPU5 2620 aa8.34□□□□□ -1.07
SEC61A1-202ENST00000424880 EPG5Q9HCE0 2579 aa8.34□□□□□ -1.07
SEC61A1-202ENST00000424880 PKD1L2Q7Z442 2459 aa8.34□□□□□ -1.07
SEC61A1-202ENST00000424880 IGLV4-3A0A075B6K6 122 aa8.34□□□□□ -1.07
SEC61A1-202ENST00000424880 CD28P10747 220 aa8.34□□□□□ -1.07
SEC61A1-202ENST00000424880 KNCNA6PVL3 124 aa8.33□□□□□ -1.08
SEC61A1-202ENST00000424880 DAZ2Q13117 558 aaKnown RBP8.33□□□□□ -1.08
SEC61A1-202ENST00000424880 DAZ4Q86SG3 579 aaKnown RBP8.33□□□□□ -1.08
SEC61A1-202ENST00000424880 MRPL53Q96EL3 112 aaKnown RBP8.33□□□□□ -1.08
SEC61A1-202ENST00000424880 DSCR8Q96T75 97 aa8.33□□□□□ -1.08
SEC61A1-202ENST00000424880 DAZ1Q9NQZ3 744 aaKnown RBP8.33□□□□□ -1.08
SEC61A1-202ENST00000424880 DAZ3Q9NR90 486 aaKnown RBP8.33□□□□□ -1.08
SEC61A1-202ENST00000424880 A0A087WVE0 104 aa8.33□□□□□ -1.08
SEC61A1-202ENST00000424880 HIST1H4AP62805 103 aaKnown RBP8.33□□□□□ -1.08
SEC61A1-202ENST00000424880 CDSNQ15517 529 aa8.33□□□□□ -1.08
SEC61A1-202ENST00000424880 IGKV3D-7A0A0C4DH55 119 aa8.32□□□□□ -1.08
SEC61A1-202ENST00000424880 OVOL1O14753 267 aa8.32□□□□□ -1.08
SEC61A1-202ENST00000424880 ITLN2Q8WWU7 325 aaPredicted RBP8.32□□□□□ -1.08
SEC61A1-202ENST00000424880 C4orf26Q17RF5 130 aa8.32□□□□□ -1.08
SEC61A1-202ENST00000424880 IGHV3-38A0A0C4DH36 116 aa8.31□□□□□ -1.08
SEC61A1-202ENST00000424880 TRBV27A0A0K0K1C4 114 aa8.31□□□□□ -1.08
SEC61A1-202ENST00000424880 ZFP36P26651 326 aaKnown RBP8.31□□□□□ -1.08
SEC61A1-202ENST00000424880 TMEM61Q8N0U2 210 aa8.31□□□□□ -1.08
SEC61A1-202ENST00000424880 IGHV4OR15-8A0A075B7B6 117 aa8.31□□□□□ -1.08
SEC61A1-202ENST00000424880 A0A087WW49 117 aa8.31□□□□□ -1.08
SEC61A1-202ENST00000424880 M0QY20 66 aa8.31□□□□□ -1.08
SEC61A1-202ENST00000424880 RNF152Q8N8N0 203 aa8.31□□□□□ -1.08
SEC61A1-202ENST00000424880 C20orf203Q8NBC4 194 aa8.31□□□□□ -1.08
SEC61A1-202ENST00000424880 MRAPQ8TCY5 172 aa8.31□□□□□ -1.08
SEC61A1-202ENST00000424880 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.3□□□□□ -1.08
SEC61A1-202ENST00000424880 IGKV2-29A2NJV5 120 aaPredicted RBP8.3□□□□□ -1.08
SEC61A1-202ENST00000424880 F5H768 121 aa8.3□□□□□ -1.08
SEC61A1-202ENST00000424880 FAM110DQ8TAY7 271 aaPredicted RBP8.3□□□□□ -1.08
SEC61A1-202ENST00000424880 DCANP1Q8TF63 244 aa8.3□□□□□ -1.08
SEC61A1-202ENST00000424880 DPH3Q96FX2 82 aa8.3□□□□□ -1.08
SEC61A1-202ENST00000424880 TMEM258P61165 79 aa8.3□□□□□ -1.08
SEC61A1-202ENST00000424880 C9orf139Q6ZV77 190 aa8.3□□□□□ -1.08
SEC61A1-202ENST00000424880 B9A039 149 aa8.29□□□□□ -1.08
SEC61A1-202ENST00000424880 C9orf129Q5T035 196 aaKnown RBP8.29□□□□□ -1.08
SEC61A1-202ENST00000424880 LENEPQ9Y5L5 61 aa8.29□□□□□ -1.08
SEC61A1-202ENST00000424880 ODF3BA8MYP8 253 aa8.29□□□□□ -1.08
SEC61A1-202ENST00000424880 MIAQ16674 131 aa8.29□□□□□ -1.08
SEC61A1-202ENST00000424880 Q8N6K4 173 aa8.29□□□□□ -1.08
SEC61A1-202ENST00000424880 FAM218AQ96MZ4 157 aa8.29□□□□□ -1.08
SEC61A1-202ENST00000424880 MED14OSP0DP75 135 aa8.29□□□□□ -1.08
SEC61A1-202ENST00000424880 TIRAPP58753 221 aa8.29□□□□□ -1.08
SEC61A1-202ENST00000424880 HRCT1Q6UXD1 115 aa8.29□□□□□ -1.08
SEC61A1-202ENST00000424880 ATOX1O00244 68 aa8.28□□□□□ -1.08
SEC61A1-202ENST00000424880 OXTP01178 125 aa8.28□□□□□ -1.08
SEC61A1-202ENST00000424880 BAALC-AS2P0C853 105 aa8.28□□□□□ -1.08
SEC61A1-202ENST00000424880 SYNJ2BPP57105 145 aa8.28□□□□□ -1.08
SEC61A1-202ENST00000424880 LY6G5BQ8NDX9 201 aa8.28□□□□□ -1.08
SEC61A1-202ENST00000424880 FAM104AQ969W3 186 aa8.28□□□□□ -1.08
SEC61A1-202ENST00000424880 SPINK13Q1W4C9 94 aa8.28□□□□□ -1.08
SEC61A1-202ENST00000424880 IGHV1-69P01742 117 aa8.27□□□□□ -1.08
SEC61A1-202ENST00000424880 Q5XG85 94 aa8.27□□□□□ -1.08
SEC61A1-202ENST00000424880 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.08
SEC61A1-202ENST00000424880 TRBV7-1A0A0A6YYK4 115 aa8.27□□□□□ -1.09
SEC61A1-202ENST00000424880 IGHV1-58A0A0C4DH39 117 aa8.27□□□□□ -1.09
SEC61A1-202ENST00000424880 TRACP01848 142 aa8.27□□□□□ -1.09
SEC61A1-202ENST00000424880 SAA4P35542 130 aa8.27□□□□□ -1.09
SEC61A1-202ENST00000424880 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.27□□□□□ -1.09
SEC61A1-202ENST00000424880 RHPN1-AS1Q9BWJ2 59 aa8.27□□□□□ -1.09
SEC61A1-202ENST00000424880 PEMTQ9UBM1 199 aa8.27□□□□□ -1.09
SEC61A1-202ENST00000424880 CCL21O00585 134 aa8.27□□□□□ -1.09
SEC61A1-202ENST00000424880 ADORA2A-AS1P86434 159 aa8.27□□□□□ -1.09
SEC61A1-202ENST00000424880 U3KQE9 123 aa8.26□□□□□ -1.09
SEC61A1-202ENST00000424880 IGHG2P01859 326 aa8.26□□□□□ -1.09
SEC61A1-202ENST00000424880 LY6EQ16553 131 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms