RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 B4DEV8 164 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 ARMS2P0C7Q2 107 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 BCL2P10415 239 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 RAB4BP61018 213 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 GNG5P63218 68 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 PPP1R1AQ13522 171 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 IAH1Q2TAA2 248 aaPredicted RBP3.69□□□□□ -1.82
SDCBP-203ENST00000424270 NTM-AS1Q6ZSK4 140 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 PRNTQ86SH4 94 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 OR10G8Q8NGN5 311 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 CHCHD10Q8WYQ3 142 aaPredicted RBP3.69□□□□□ -1.82
SDCBP-203ENST00000424270 FAM167A-AS1Q96KT0 104 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 TMEM243Q9BU79 118 aa3.69□□□□□ -1.82
SDCBP-203ENST00000424270 GRIFINA4D1Z8 144 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 M0R036 132 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 PLA2G10O15496 165 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 LYRM1O43325 122 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 FAUP35544 74 aaKnown RBP3.68□□□□□ -1.82
SDCBP-203ENST00000424270 AP3S2P59780 193 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 KRTAP10-6P60371 365 aaPredicted RBP3.68□□□□□ -1.82
SDCBP-203ENST00000424270 HBG1P69891 147 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 HBG2P69892 147 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 MT1HP80294 61 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 KHDC3LQ587J8 217 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 AKAP14Q86UN6 197 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 STX12Q86Y82 276 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 ZFP82Q8N141 532 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 LINC00304Q8N9R0 145 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 ENKURQ8TC29 256 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 SMIM4Q8WVI0 70 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 DEDD2Q8WXF8 326 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 ALKBH7Q9BT30 221 aaPredicted RBP3.68□□□□□ -1.82
SDCBP-203ENST00000424270 IL36BQ9NZH7 164 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 MBD2Q9UBB5 411 aa3.68□□□□□ -1.82
SDCBP-203ENST00000424270 LSM5Q9Y4Y9 91 aaKnown RBP3.68□□□□□ -1.82
SDCBP-203ENST00000424270 TMSB15BA0A087X1C1 80 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 IGHV1-58A0A0C4DH39 117 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 C7orf66A4D0T2 115 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 NAP1L6A6NFF2 107 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 TSHBP01222 138 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 STAG3L2P0CL84 134 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 PVALBP20472 110 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-203ENST00000424270 S100A11P31949 105 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 XCL1P47992 114 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 TAS2R45P59539 299 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 IQCJQ1A5X6 159 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 AMMECR1LQ6DCA0 310 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 FAM19A5Q7Z5A7 132 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-203ENST00000424270 TOMM5Q8N4H5 51 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 THAP6Q8TBB0 222 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 MARVELD1Q9BSK0 173 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 NPCDR1Q9BY65 106 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 KRTAP4-1Q9BYQ7 146 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 RPP21Q9H633 154 aaKnown RBP3.67□□□□□ -1.82
SDCBP-203ENST00000424270 KCNIP2Q9NS61 270 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 PSG8Q9UQ74 426 aa3.67□□□□□ -1.82
SDCBP-203ENST00000424270 IGKV3D-20A0A0C4DH25 116 aa3.66□□□□□ -1.82
SDCBP-203ENST00000424270 ANKRD20A5PA0PJZ0 165 aa3.66□□□□□ -1.82
SDCBP-203ENST00000424270 INMT-MINDY4F8WBC2 141 aa3.66□□□□□ -1.82
SDCBP-203ENST00000424270 APOMO95445 188 aa3.66□□□□□ -1.82
SDCBP-203ENST00000424270 SMIM17P0DL12 118 aa3.66□□□□□ -1.82
SDCBP-203ENST00000424270 LBHQ53QV2 105 aaPredicted RBP3.66□□□□□ -1.82
SDCBP-203ENST00000424270 CAMK2N2Q96S95 79 aa3.66□□□□□ -1.82
SDCBP-203ENST00000424270 USH2AO75445 5202 aa3.65□□□□□ -1.82
SDCBP-203ENST00000424270 A0A087X002 238 aa3.65□□□□□ -1.83
SDCBP-203ENST00000424270 A0A0U1RRA0 63 aa3.65□□□□□ -1.83
SDCBP-203ENST00000424270 A0A1B0GUV1 79 aa3.65□□□□□ -1.83
SDCBP-203ENST00000424270 FABP5P3A8MUU1 101 aa3.65□□□□□ -1.83
SDCBP-203ENST00000424270 C17orf112F2Z3M2 114 aa3.65□□□□□ -1.83
SDCBP-203ENST00000424270 TRIAP1O43715 76 aa3.65□□□□□ -1.83
SDCBP-203ENST00000424270 MBPP02686 304 aaPredicted RBP3.65□□□□□ -1.83
SDCBP-203ENST00000424270 FLI1Q01543 452 aaPredicted RBP3.65□□□□□ -1.83
SDCBP-203ENST00000424270 FOXI1Q12951 378 aa3.65□□□□□ -1.83
SDCBP-203ENST00000424270 LRRC37A5PQ49AS3 106 aa3.65□□□□□ -1.83
SDCBP-203ENST00000424270 SAPCD1Q5SSQ6 148 aa3.65□□□□□ -1.83
SDCBP-203ENST00000424270 RNASEKQ6P5S7 137 aaKnown RBP3.65□□□□□ -1.83
SDCBP-203ENST00000424270 NUDT10Q8NFP7 164 aa3.65□□□□□ -1.83
SDCBP-203ENST00000424270 IGLV4-69A0A075B6H9 119 aa3.64□□□□□ -1.83
SDCBP-203ENST00000424270 MBP02144 154 aa3.64□□□□□ -1.83
SDCBP-203ENST00000424270 SULT1A1P50225 295 aa3.64□□□□□ -1.83
SDCBP-203ENST00000424270 ATP6V1FQ16864 119 aa3.64□□□□□ -1.83
SDCBP-203ENST00000424270 TCTE3Q8IZS6 198 aa3.64□□□□□ -1.83
SDCBP-203ENST00000424270 NUDT11Q96G61 164 aa3.64□□□□□ -1.83
SDCBP-203ENST00000424270 MED28Q9H204 178 aa3.64□□□□□ -1.83
SDCBP-203ENST00000424270 UBE2D4Q9Y2X8 147 aa3.64□□□□□ -1.83
SDCBP-203ENST00000424270 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
SDCBP-203ENST00000424270 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 C9orf170A2RU37 121 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 M0QXV9 152 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 CCL25O15444 150 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 ZNF861PO60384 105 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 TCRAP04437 139 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 MGPP08493 103 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 NDUFA5Q16718 116 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 CD164L2Q6UWJ8 174 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 ERASQ7Z444 233 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 KRTAP11-1Q8IUC1 163 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 OR5A1Q8NGJ0 315 aa3.63□□□□□ -1.83
SDCBP-203ENST00000424270 OPRPNQ99935 248 aaPredicted RBP3.63□□□□□ -1.83
SDCBP-203ENST00000424270 SLC25A21Q9BQT8 299 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms