RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 MRPL16Q9NX20 251 aaKnown RBP13.7□□□□□ -0.22
CROCCP3-202ENST00000420820 WNK1Q9H4A3 2382 aa13.7□□□□□ -0.22
CROCCP3-202ENST00000420820 BAHCC1Q9P281 2608 aa13.7□□□□□ -0.22
CROCCP3-202ENST00000420820 SAMD5Q5TGI4 173 aa13.7□□□□□ -0.22
CROCCP3-202ENST00000420820 DNAJC30Q96LL9 226 aa13.7□□□□□ -0.22
CROCCP3-202ENST00000420820 NDUFA7O95182 113 aa13.69□□□□□ -0.22
CROCCP3-202ENST00000420820 CRYBA4P53673 196 aa13.69□□□□□ -0.22
CROCCP3-202ENST00000420820 C12orf74Q32Q52 190 aa13.69□□□□□ -0.22
CROCCP3-202ENST00000420820 RNASE8Q8TDE3 154 aaKnown RBP13.69□□□□□ -0.22
CROCCP3-202ENST00000420820 PLEKHB2Q96CS7 222 aa13.69□□□□□ -0.22
CROCCP3-202ENST00000420820 AMELXQ99217 191 aa13.69□□□□□ -0.22
CROCCP3-202ENST00000420820 MTORP42345 2549 aa13.69□□□□□ -0.22
CROCCP3-202ENST00000420820 CMC4P56277 68 aaPredicted RBP13.68□□□□□ -0.22
CROCCP3-202ENST00000420820 TSPEAR-AS2P59090 65 aa13.68□□□□□ -0.22
CROCCP3-202ENST00000420820 ZNF418Q8TF45 676 aaPredicted RBP13.68□□□□□ -0.22
CROCCP3-202ENST00000420820 GAGE12BA1L429 117 aa13.68□□□□□ -0.22
CROCCP3-202ENST00000420820 TMEM170BQ5T4T1 132 aa13.68□□□□□ -0.22
CROCCP3-202ENST00000420820 OR5A1Q8NGJ0 315 aa13.68□□□□□ -0.22
CROCCP3-202ENST00000420820 FAM110AQ9BQ89 295 aa13.68□□□□□ -0.22
CROCCP3-202ENST00000420820 CHCHD7Q9BUK0 85 aa13.68□□□□□ -0.22
CROCCP3-202ENST00000420820 IGLV1-51P01701 117 aa13.67□□□□□ -0.22
CROCCP3-202ENST00000420820 FLNBO75369 2602 aaKnown RBP13.67□□□□□ -0.22
CROCCP3-202ENST00000420820 TMEM223A0PJW6 202 aa13.66□□□□□ -0.22
CROCCP3-202ENST00000420820 FABP2P12104 132 aa13.66□□□□□ -0.22
CROCCP3-202ENST00000420820 VCX2Q9H322 139 aa13.66□□□□□ -0.22
CROCCP3-202ENST00000420820 A0A0J9YY99 117 aa13.66□□□□□ -0.22
CROCCP3-202ENST00000420820 GIG44P09565 113 aaPredicted RBP13.66□□□□□ -0.22
CROCCP3-202ENST00000420820 ZNF22P17026 224 aaPredicted RBP13.66□□□□□ -0.22
CROCCP3-202ENST00000420820 C19orf73Q9NVV2 129 aa13.66□□□□□ -0.22
CROCCP3-202ENST00000420820 SPCS1Q9Y6A9 102 aa13.66□□□□□ -0.22
CROCCP3-202ENST00000420820 IGLL5B9A064 214 aa13.65□□□□□ -0.22
CROCCP3-202ENST00000420820 SAP30O75446 220 aa13.64□□□□□ -0.23
CROCCP3-202ENST00000420820 SCGB1D4Q6XE38 83 aa13.64□□□□□ -0.23
CROCCP3-202ENST00000420820 SMR3AQ99954 134 aa13.64□□□□□ -0.23
CROCCP3-202ENST00000420820 J3QQQ9 107 aa13.64□□□□□ -0.23
CROCCP3-202ENST00000420820 SPANXB1Q9NS25 103 aaPredicted RBP13.64□□□□□ -0.23
CROCCP3-202ENST00000420820 A0A0J9YXV3 536 aa13.63□□□□□ -0.23
CROCCP3-202ENST00000420820 LEPROTO15243 131 aa13.63□□□□□ -0.23
CROCCP3-202ENST00000420820 MRPS36P82909 103 aaKnown RBP13.63□□□□□ -0.23
CROCCP3-202ENST00000420820 SPANXA1Q9NS26 97 aa13.63□□□□□ -0.23
CROCCP3-202ENST00000420820 UBE2D4Q9Y2X8 147 aa13.63□□□□□ -0.23
CROCCP3-202ENST00000420820 OTOGQ6ZRI0 2925 aa13.62□□□□□ -0.23
CROCCP3-202ENST00000420820 TMEM263Q8WUH6 116 aaKnown RBP13.62□□□□□ -0.23
CROCCP3-202ENST00000420820 SLC25A29Q8N8R3 303 aa13.62□□□□□ -0.23
CROCCP3-202ENST00000420820 IGHV3OR16-12A0A075B7B8 117 aa13.61□□□□□ -0.23
CROCCP3-202ENST00000420820 RBX1P62877 108 aa13.61□□□□□ -0.23
CROCCP3-202ENST00000420820 CEMP1Q6PRD7 247 aaPredicted RBP13.61□□□□□ -0.23
CROCCP3-202ENST00000420820 HIVEP2P31629 2446 aa13.61□□□□□ -0.23
CROCCP3-202ENST00000420820 UBE2D1P51668 147 aa13.6□□□□□ -0.23
CROCCP3-202ENST00000420820 TRGV1A0A0A0MS02 117 aa13.6□□□□□ -0.23
CROCCP3-202ENST00000420820 RRN3P1Q2M238 152 aa13.6□□□□□ -0.23
CROCCP3-202ENST00000420820 LGALS3P17931 250 aaKnown RBP13.59□□□□□ -0.23
CROCCP3-202ENST00000420820 SRSF9Q13242 221 aaKnown RBP eCLIP13.59□□□□□ -0.23
CROCCP3-202ENST00000420820 COTL1Q14019 142 aa13.59□□□□□ -0.23
CROCCP3-202ENST00000420820 OCIAD2Q56VL3 154 aa13.59□□□□□ -0.23
CROCCP3-202ENST00000420820 ZNF479Q96JC4 524 aa13.59□□□□□ -0.23
CROCCP3-202ENST00000420820 DAZ2Q13117 558 aaKnown RBP13.58□□□□□ -0.23
CROCCP3-202ENST00000420820 SETXQ7Z333 2677 aaKnown RBP13.58□□□□□ -0.23
CROCCP3-202ENST00000420820 TMEM238LA0A1B0GVL6 79 aa13.58□□□□□ -0.24
CROCCP3-202ENST00000420820 PLAC8L1A1L4L8 177 aa13.58□□□□□ -0.24
CROCCP3-202ENST00000420820 A6NJY4 79 aa13.58□□□□□ -0.24
CROCCP3-202ENST00000420820 IGHV3-30P01768 117 aa13.58□□□□□ -0.24
CROCCP3-202ENST00000420820 IGHV3-30-5P0DP03 117 aa13.58□□□□□ -0.24
CROCCP3-202ENST00000420820 Q6ZTI0 123 aa13.58□□□□□ -0.24
CROCCP3-202ENST00000420820 CSNK1G2-AS1Q8NCQ2 148 aa13.58□□□□□ -0.24
CROCCP3-202ENST00000420820 WFDC10AQ9H1F0 79 aa13.58□□□□□ -0.24
CROCCP3-202ENST00000420820 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.57□□□□□ -0.24
CROCCP3-202ENST00000420820 TRAV4A0A0B4J268 109 aa13.57□□□□□ -0.24
CROCCP3-202ENST00000420820 IGHV3-38A0A0C4DH36 116 aa13.57□□□□□ -0.24
CROCCP3-202ENST00000420820 TRBV10-1A0A0K0K1A3 114 aa13.57□□□□□ -0.24
CROCCP3-202ENST00000420820 IGKV2-29A2NJV5 120 aaPredicted RBP13.57□□□□□ -0.24
CROCCP3-202ENST00000420820 KRTAP10-3P60369 221 aa13.57□□□□□ -0.24
CROCCP3-202ENST00000420820 LY6G6DO95868 133 aa13.56□□□□□ -0.24
CROCCP3-202ENST00000420820 TIMM21Q9BVV7 248 aa13.56□□□□□ -0.24
CROCCP3-202ENST00000420820 NIPBLQ6KC79 2804 aaeCLIP13.56□□□□□ -0.24
CROCCP3-202ENST00000420820 TINCRA0A1B0GVN0 87 aa13.56□□□□□ -0.24
CROCCP3-202ENST00000420820 SETD2Q9BYW2 2564 aaPredicted RBP13.56□□□□□ -0.24
CROCCP3-202ENST00000420820 NDUFA11Q86Y39 141 aa13.55□□□□□ -0.24
CROCCP3-202ENST00000420820 K7EQD1 137 aa13.54□□□□□ -0.24
CROCCP3-202ENST00000420820 Q6ZUT4 128 aa13.54□□□□□ -0.24
CROCCP3-202ENST00000420820 C16orf74Q96GX8 76 aa13.54□□□□□ -0.24
CROCCP3-202ENST00000420820 RNASE13Q5GAN3 156 aaKnown RBP13.54□□□□□ -0.24
CROCCP3-202ENST00000420820 C1QTNF4Q9BXJ3 329 aa13.54□□□□□ -0.24
CROCCP3-202ENST00000420820 IGHV3-30-3P0DP02 117 aa13.53□□□□□ -0.24
CROCCP3-202ENST00000420820 OVOL2Q9BRP0 275 aa13.53□□□□□ -0.24
CROCCP3-202ENST00000420820 NOP10Q9NPE3 64 aaKnown RBP13.53□□□□□ -0.24
CROCCP3-202ENST00000420820 RPL35AP18077 110 aaKnown RBP13.52□□□□□ -0.25
CROCCP3-202ENST00000420820 RPL36AP83881 106 aaKnown RBP13.52□□□□□ -0.25
CROCCP3-202ENST00000420820 C10orf126Q8N4M7 172 aa13.52□□□□□ -0.25
CROCCP3-202ENST00000420820 RPL36ALQ969Q0 106 aaKnown RBP13.52□□□□□ -0.25
CROCCP3-202ENST00000420820 CBY1Q9Y3M2 126 aa13.52□□□□□ -0.25
CROCCP3-202ENST00000420820 IGHV3-64A0A075B6Q5 118 aa13.51□□□□□ -0.25
CROCCP3-202ENST00000420820 IGHV1-58A0A0C4DH39 117 aa13.51□□□□□ -0.25
CROCCP3-202ENST00000420820 UBE2D3P61077 147 aa13.51□□□□□ -0.25
CROCCP3-202ENST00000420820 UBE2D2P62837 147 aa13.51□□□□□ -0.25
CROCCP3-202ENST00000420820 DAZ4Q86SG3 579 aaKnown RBP13.51□□□□□ -0.25
CROCCP3-202ENST00000420820 DAZ3Q9NR90 486 aaKnown RBP13.51□□□□□ -0.25
CROCCP3-202ENST00000420820 PGPEP1Q9NXJ5 209 aa13.51□□□□□ -0.25
CROCCP3-202ENST00000420820 LINC00482Q8N8I6 264 aa13.51□□□□□ -0.25
CROCCP3-202ENST00000420820 IGLV5-45A0A087WSX0 123 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms