RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 CTRLP40313 264 aa7.18□□□□□ -1.26
SSBP3-206ENST00000420121 RBX1P62877 108 aa7.18□□□□□ -1.26
SSBP3-206ENST00000420121 CACNG7P62955 275 aa7.18□□□□□ -1.26
SSBP3-206ENST00000420121 TMEM97Q5BJF2 176 aa7.18□□□□□ -1.26
SSBP3-206ENST00000420121 KCNIP4Q6PIL6 250 aa7.18□□□□□ -1.26
SSBP3-206ENST00000420121 SCXQ7RTU7 201 aa7.18□□□□□ -1.26
SSBP3-206ENST00000420121 C1orf43Q9BWL3 253 aa7.18□□□□□ -1.26
SSBP3-206ENST00000420121 CNFNQ9BYD5 112 aa7.18□□□□□ -1.26
SSBP3-206ENST00000420121 F2Z2F3 143 aa7.17□□□□□ -1.26
SSBP3-206ENST00000420121 NTF3P20783 257 aa7.17□□□□□ -1.26
SSBP3-206ENST00000420121 KRTAP10-4P60372 401 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-206ENST00000420121 GAGE6Q13070 117 aa7.17□□□□□ -1.26
SSBP3-206ENST00000420121 MIAQ16674 131 aa7.17□□□□□ -1.26
SSBP3-206ENST00000420121 OCC1Q8TAD7 63 aa7.17□□□□□ -1.26
SSBP3-206ENST00000420121 TRBV25-1A0A075B6N4 114 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 USP17L23D6RBM5 183 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 CRPP02741 224 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 TAGLN2P37802 199 aaKnown RBP7.16□□□□□ -1.26
SSBP3-206ENST00000420121 PCP4P48539 62 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 NKX2-5P52952 324 aaPredicted RBP7.16□□□□□ -1.26
SSBP3-206ENST00000420121 PKIAP61925 76 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 WDR73Q6P4I2 378 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 RASL11AQ6T310 242 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 CLPSL2Q6UWE3 100 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 LINC00269Q8N2A0 174 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 C20orf203Q8NBC4 194 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 LYPD6BQ8NI32 183 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 GFRA4Q9GZZ7 299 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 RNASE7Q9H1E1 156 aaKnown RBP7.16□□□□□ -1.26
SSBP3-206ENST00000420121 DPH3P1Q9H4G8 78 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 PKHD1L1Q86WI1 4243 aa7.16□□□□□ -1.26
SSBP3-206ENST00000420121 IGHV1-24A0A0C4DH33 117 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 XKRY2A2RUG3 117 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 H7C1H1 209 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 PRSS1P07477 247 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 TRGC1P0CF51 173 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 ALKAL2Q6UX46 152 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.15□□□□□ -1.26
SSBP3-206ENST00000420121 CIRBP-AS1Q8TBR5 109 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 DEFB104AQ8WTQ1 72 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 GTSF1Q8WW33 167 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 PGLYRP4Q96LB8 373 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 CHAC1Q9BUX1 264 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 RPP21Q9H633 154 aaKnown RBP7.15□□□□□ -1.26
SSBP3-206ENST00000420121 NIT2Q9NQR4 276 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 BIN3Q9NQY0 253 aa7.15□□□□□ -1.26
SSBP3-206ENST00000420121 IGLV4-60A0A075B6I1 120 aa7.14□□□□□ -1.27
SSBP3-206ENST00000420121 SNAPINO95295 136 aa7.14□□□□□ -1.27
SSBP3-206ENST00000420121 HLA-DQA1P01909 254 aa7.14□□□□□ -1.27
SSBP3-206ENST00000420121 CT83Q5H943 113 aa7.14□□□□□ -1.27
SSBP3-206ENST00000420121 LINC00518Q8N0U6 118 aa7.14□□□□□ -1.27
SSBP3-206ENST00000420121 A0A1B0GUV1 79 aa7.13□□□□□ -1.27
SSBP3-206ENST00000420121 TMEM250H0YL14 139 aa7.13□□□□□ -1.27
SSBP3-206ENST00000420121 FOXA3P55318 350 aaPredicted RBP7.13□□□□□ -1.27
SSBP3-206ENST00000420121 REG3AQ06141 175 aa7.13□□□□□ -1.27
SSBP3-206ENST00000420121 C14orf177Q52M58 125 aa7.13□□□□□ -1.27
SSBP3-206ENST00000420121 GATD1Q8NB37 220 aa7.13□□□□□ -1.27
SSBP3-206ENST00000420121 LRP1Q07954 4544 aaKnown RBP7.13□□□□□ -1.27
SSBP3-206ENST00000420121 IGLV10-54A0A075B6I4 117 aa7.12□□□□□ -1.27
SSBP3-206ENST00000420121 TRAV26-2A0A0B4J265 109 aa7.12□□□□□ -1.27
SSBP3-206ENST00000420121 HSBP1L1C9JCN9 74 aa7.12□□□□□ -1.27
SSBP3-206ENST00000420121 PLA2G1BP04054 148 aaKnown RBP7.12□□□□□ -1.27
SSBP3-206ENST00000420121 TWIST1Q15672 202 aa7.12□□□□□ -1.27
SSBP3-206ENST00000420121 TMEM243Q9BU79 118 aa7.12□□□□□ -1.27
SSBP3-206ENST00000420121 PANO1I0J062 215 aa7.11□□□□□ -1.27
SSBP3-206ENST00000420121 BLOC1S1P78537 153 aa7.11□□□□□ -1.27
SSBP3-206ENST00000420121 FAM231DQ6ZW35 169 aa7.11□□□□□ -1.27
SSBP3-206ENST00000420121 C9orf163Q8N9P6 203 aa7.11□□□□□ -1.27
SSBP3-206ENST00000420121 RPL39LQ96EH5 51 aaKnown RBP7.11□□□□□ -1.27
SSBP3-206ENST00000420121 DGAT2L7PQ6IED9 249 aa7.1□□□□□ -1.27
SSBP3-206ENST00000420121 FAT3Q8TDW7 4589 aa7.1□□□□□ -1.27
SSBP3-206ENST00000420121 TRAV8-4A0A0B4J246 113 aa7.09□□□□□ -1.27
SSBP3-206ENST00000420121 GAS8-AS1O95177 125 aa7.09□□□□□ -1.27
SSBP3-206ENST00000420121 SLPIP03973 132 aa7.09□□□□□ -1.27
SSBP3-206ENST00000420121 AMTP48728 403 aa7.09□□□□□ -1.27
SSBP3-206ENST00000420121 SDIM1Q6ZPB5 146 aa7.09□□□□□ -1.27
SSBP3-206ENST00000420121 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.09□□□□□ -1.27
SSBP3-206ENST00000420121 KRTAP29-1A8MX34 341 aaPredicted RBP7.08□□□□□ -1.28
SSBP3-206ENST00000420121 NDUFS6O75380 124 aaKnown RBP7.08□□□□□ -1.28
SSBP3-206ENST00000420121 CNBPP62633 177 aaKnown RBP7.08□□□□□ -1.28
SSBP3-206ENST00000420121 FAM231BA6NCW3 169 aa7.07□□□□□ -1.28
SSBP3-206ENST00000420121 SDHAF1A6NFY7 115 aa7.07□□□□□ -1.28
SSBP3-206ENST00000420121 PCP4L1A6NKN8 68 aa7.07□□□□□ -1.28
SSBP3-206ENST00000420121 A8MWL6 223 aa7.07□□□□□ -1.28
SSBP3-206ENST00000420121 SRP19P09132 144 aaKnown RBP7.07□□□□□ -1.28
SSBP3-206ENST00000420121 CIRBPQ14011 172 aaKnown RBP7.07□□□□□ -1.28
SSBP3-206ENST00000420121 LINC01551Q86U37 167 aa7.07□□□□□ -1.28
SSBP3-206ENST00000420121 TRBV6-5A0A0K0K1A5 114 aa7.06□□□□□ -1.28
SSBP3-206ENST00000420121 UBE2L6O14933 153 aa7.06□□□□□ -1.28
SSBP3-206ENST00000420121 NCR2O95944 276 aa7.06□□□□□ -1.28
SSBP3-206ENST00000420121 HNRNPA3P51991 378 aaKnown RBP7.06□□□□□ -1.28
SSBP3-206ENST00000420121 CEBPGP53567 150 aa7.06□□□□□ -1.28
SSBP3-206ENST00000420121 C15orf56Q8N910 161 aa7.06□□□□□ -1.28
SSBP3-206ENST00000420121 RNF185Q96GF1 192 aa7.06□□□□□ -1.28
SSBP3-206ENST00000420121 SMIM7Q9BQ49 75 aa7.06□□□□□ -1.28
SSBP3-206ENST00000420121 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.05□□□□□ -1.28
SSBP3-206ENST00000420121 hDV102S1A0JD36 115 aa7.05□□□□□ -1.28
SSBP3-206ENST00000420121 IGKV2-29A2NJV5 120 aaPredicted RBP7.05□□□□□ -1.28
SSBP3-206ENST00000420121 HIGD1CA8MV81 97 aa7.05□□□□□ -1.28
SSBP3-206ENST00000420121 TEX261Q6UWH6 196 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms