RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 IFITM1P13164 125 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 COX6B1P14854 86 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 RPL13AP40429 203 aaKnown RBP1.82□□□□□ -2.12
VPS41-206ENST00000418457 FXYD7P58549 80 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 ATP5G2Q06055 141 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 BSPH1Q075Z2 132 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 PMVKQ15126 192 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 RHOHQ15669 191 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 ATXN8Q156A1 80 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 LINC01620Q4KN68 170 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 TTC32Q5I0X7 151 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 AMTNQ6UX39 209 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 LYPD2Q6UXB3 125 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 NDUFA11Q86Y39 141 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 KRTAP11-1Q8IUC1 163 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 SLC25A29Q8N8R3 303 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 LY6G5BQ8NDX9 201 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 OR10J6PQ8NGY7 276 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 Q8TAT8 98 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 BAALCQ8WXS3 180 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 EEF1AKMT3Q96AZ1 226 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 PLEKHB2Q96CS7 222 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 METTL26Q96S19 204 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 ONECUT1Q9UBC0 465 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 PRO1854Q9UHT4 67 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 CHD6Q8TD26 2715 aa1.82□□□□□ -2.12
VPS41-206ENST00000418457 TENM4Q6N022 2769 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 AHCTF1Q8WYP5 2266 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 IGHV7-81A0A0B4J1V7 117 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 TRAV8-2A0A0B4J237 113 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 TRAV8-4A0A0B4J246 113 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 A0A0J9YY99 117 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 TRBV6-5A0A0K0K1A5 114 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 TRBV30A0A0K0K1B3 111 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 TRBV10-2A0A0K0K1G8 114 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 SPAARA0A1B0GVQ0 90 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 FAM223BA6NKX1 122 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 H3BMM0 161 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 H3BVH4 76 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 J3QQQ9 107 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 M0R2P5 195 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 LEPROTO15243 131 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 BRI3O95415 125 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 TCL1BO95988 128 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 IGHV3-30P01768 117 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 TRGV3P03979 118 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 ACYP1P07311 99 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 APELAP0DMC3 54 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 IGHV3-30-5P0DP03 117 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 LGALS3P17931 250 aaKnown RBP1.81□□□□□ -2.12
VPS41-206ENST00000418457 PRTN3P24158 256 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 COX7A1P24310 79 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 S100A4P26447 101 aaKnown RBP1.81□□□□□ -2.12
VPS41-206ENST00000418457 INSL3P51460 131 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 EFNA4P52798 201 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 DLX1P56177 255 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 KRTAP12-2P59991 146 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 HES1Q14469 280 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 DEFB109BQ30KR1 87 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 C5orf47Q569G3 176 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 TMEM170BQ5T4T1 132 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 APRG1Q8IVJ8 170 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 FAM223AQ8IWN6 122 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 DYNAPQ8N1N2 210 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 ANKRD29Q8N6D5 301 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 Q8N6K4 173 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 COPS9Q8WXC6 57 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 UBE2WQ96B02 151 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 CARD19Q96LW7 228 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 IMUPQ9GZP8 106 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 TMEM126AQ9H061 195 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 AGPAT4-IT1Q9H0P7 198 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 PHLDA3Q9Y5J5 127 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 GVINP1Q7Z2Y8 2422 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 SPTBN4Q9H254 2564 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 EPG5Q9HCE0 2579 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 ZGRF1Q86YA3 2104 aa1.81□□□□□ -2.12
VPS41-206ENST00000418457 PLCE1Q9P212 2302 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 NCOR1O75376 2440 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 RELNP78509 3460 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 IGLV4-69A0A075B6H9 119 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 IGHV1OR15-1A0A075B7D0 117 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 TRAV26-2A0A0B4J265 109 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 A0A0J9YXY3 114 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 TRBV27A0A0K0K1C4 114 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 LOC100131303A0A0U1RQF7 123 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 IGIPA6NJ69 53 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 C9JAW5 83 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 E7EQL1 145 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 H3BUA1 57 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 PLXNB1O43157 2135 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 IGHV3-33P01772 117 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 IGF1P05019 195 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 MGPP08493 103 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 POLR2KP53803 58 aaKnown RBP1.8□□□□□ -2.12
VPS41-206ENST00000418457 NSUN5P1Q3KNT7 163 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 DEFB121Q5J5C9 76 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 ZFP2Q6ZN57 461 aa1.8□□□□□ -2.12
VPS41-206ENST00000418457 LINC01561Q8N1V8 128 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms