RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 HECTD1Q9ULT8 2610 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 CENPEQ02224 2701 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 TRGV1A0A0A0MS02 117 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 NUPR1O60356 82 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 LEPROTL1O95214 131 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 IFI27P40305 119 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 KRTAP12-2P59991 146 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 PMCHL1Q16048 86 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 LBHQ53QV2 105 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 PYY3Q5JQD4 70 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 LINC00518Q8N0U6 118 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 C1orf158Q8N1D5 194 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 Q8N8P6 123 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 SMIM2Q9BVW6 85 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 MAP1LC3CQ9BXW4 147 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 ST20Q9HBF5 79 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 HSPB8Q9UJY1 196 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 U3KQK5 164 aa2.69□□□□□ -1.98
HMGB3P20-201ENST00000417997 MUC4Q99102 2169 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 CSMD1Q96PZ7 3565 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 SONP18583 2426 aaKnown RBP2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 ZANQ9Y493 2812 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 TRGV2A0A075B6R0 118 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 IGHV3-73A0A0B4J1V6 119 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 H0Y8G0 127 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 PRM2P04554 102 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 DNAH10OSP0CZ25 163 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 G0S2P27469 103 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 FCER1GP30273 86 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 EMP1P54849 157 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 LAGE3Q14657 143 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 JOSD1Q15040 202 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 DEFB135Q30KP9 77 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 HIGD2BQ4VC39 106 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 ORMDL2Q53FV1 153 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 C11orf72Q8NBR9 251 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 WFDC9Q8NEX5 89 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 OR4C5Q8NGB2 326 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 C11orf45Q8TAV5 145 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 RNASE8Q8TDE3 154 aaKnown RBP2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 PTH2Q96A98 100 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 RPL39LQ96EH5 51 aaKnown RBP2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 C20orf78Q9BR46 151 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 NDUFAF3Q9BU61 184 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 TMEM70Q9BUB7 260 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 JPT2Q9H910 190 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 NIT2Q9NQR4 276 aa2.68□□□□□ -1.98
HMGB3P20-201ENST00000417997 FN1P02751 2386 aaKnown RBP2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 TRAV4A0A0B4J268 109 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 TRGV4A0A0C4DH28 118 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 KIR2DL5BA0A0G2JN68 375 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 KIR2DL5BA0A0G2JPC4 375 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 SMIM9A6NGZ8 99 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 PCP4L1A6NKN8 68 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 HSBP1L1C9JCN9 74 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 TSTD3H0UI37 97 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 K7EMI3 77 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 TCAPO15273 167 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 RS1O15537 224 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 ATP5LO75964 103 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 IGHV3-53P01767 116 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 C3orf79P0CE67 100 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 LGALS9BQ3B8N2 356 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 CFAP126Q5VTH2 177 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 ZNF705AQ6ZN79 300 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 Q6ZN92 141 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 Q6ZTI0 123 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 KIR2DL5AQ8N109 375 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 LINC00469Q8N7U9 141 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 KIR2DL5BQ8NHK3 375 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 IFI27L1Q96BM0 104 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 C18orf15Q96N68 181 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 KIR2DL4Q99706 377 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 VAMP8Q9BV40 100 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 NOP10Q9NPE3 64 aaKnown RBP2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 KIF25-AS1Q9Y6Z4 181 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 ACANP16112 2415 aa2.67□□□□□ -1.98
HMGB3P20-201ENST00000417997 OTOGQ6ZRI0 2925 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 WNK1Q9H4A3 2382 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 ITPR2Q14571 2701 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 TLN2Q9Y4G6 2542 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 NACAE9PAV3 2078 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 IGLV2-18A0A075B6J9 118 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 TRBV6-5A0A0K0K1A5 114 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 SDHAF1A6NFY7 115 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 LINC01549A6NIU2 74 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 A8MU10 97 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 SYS1-DBNDD2H3BUS1 97 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 I3L3M4 83 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 K7EQD1 137 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 CRYGDP07320 174 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 GIG44P09565 113 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 MIFP14174 115 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 RPL32P62910 135 aaKnown RBP2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 DAZ2Q13117 558 aaKnown RBP2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 RHOHQ15669 191 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 ZFP2Q6ZN57 461 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 NEGR1Q7Z3B1 354 aa2.66□□□□□ -1.98
HMGB3P20-201ENST00000417997 CSNK1G2-AS1Q8NCQ2 148 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms