RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 LCE2CQ5TA81 110 aa6.31□□□□□ -1.4
RFFL-203ENST00000413582 SPANXN1Q5VSR9 72 aa6.31□□□□□ -1.4
RFFL-203ENST00000413582 RASL10AQ92737 203 aa6.31□□□□□ -1.4
RFFL-203ENST00000413582 TRAV4A0A0B4J268 109 aa6.3□□□□□ -1.4
RFFL-203ENST00000413582 H3BVH4 76 aa6.3□□□□□ -1.4
RFFL-203ENST00000413582 M0R2P5 195 aa6.3□□□□□ -1.4
RFFL-203ENST00000413582 HLA-DQA1P01909 254 aa6.3□□□□□ -1.4
RFFL-203ENST00000413582 TRGC1P0CF51 173 aa6.3□□□□□ -1.4
RFFL-203ENST00000413582 SMIM15Q7Z3B0 74 aa6.3□□□□□ -1.4
RFFL-203ENST00000413582 SH2D6Q7Z4S9 175 aa6.3□□□□□ -1.4
RFFL-203ENST00000413582 TPPP3Q9BW30 176 aa6.3□□□□□ -1.4
RFFL-203ENST00000413582 TMEM191AQ9H0A3 160 aa6.3□□□□□ -1.4
RFFL-203ENST00000413582 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.29□□□□□ -1.4
RFFL-203ENST00000413582 CIDEAO60543 219 aa6.29□□□□□ -1.4
RFFL-203ENST00000413582 LAGE3Q14657 143 aa6.29□□□□□ -1.4
RFFL-203ENST00000413582 TWIST1Q15672 202 aa6.29□□□□□ -1.4
RFFL-203ENST00000413582 LINC01620Q4KN68 170 aa6.29□□□□□ -1.4
RFFL-203ENST00000413582 MRPL54Q6P161 138 aaKnown RBP6.29□□□□□ -1.4
RFFL-203ENST00000413582 TMEM136Q6ZRR5 245 aa6.29□□□□□ -1.4
RFFL-203ENST00000413582 OR10AG1Q8NH19 301 aa6.29□□□□□ -1.4
RFFL-203ENST00000413582 CHAC1Q9BUX1 264 aa6.29□□□□□ -1.4
RFFL-203ENST00000413582 TRAV8-6A0A0B4J262 113 aa6.28□□□□□ -1.4
RFFL-203ENST00000413582 A8MWV9 139 aa6.28□□□□□ -1.4
RFFL-203ENST00000413582 LECT2O14960 151 aa6.28□□□□□ -1.4
RFFL-203ENST00000413582 IGHV3-30P01768 117 aa6.28□□□□□ -1.4
RFFL-203ENST00000413582 IGHV3-33P01772 117 aa6.28□□□□□ -1.4
RFFL-203ENST00000413582 IGHV3-30-3P0DP02 117 aa6.28□□□□□ -1.4
RFFL-203ENST00000413582 IGHV3-30-5P0DP03 117 aa6.28□□□□□ -1.4
RFFL-203ENST00000413582 GATA1P15976 413 aaPredicted RBP6.28□□□□□ -1.4
RFFL-203ENST00000413582 RPS10P46783 165 aaKnown RBP6.28□□□□□ -1.4
RFFL-203ENST00000413582 TM2D2Q9BX73 214 aa6.28□□□□□ -1.4
RFFL-203ENST00000413582 TRAPPC1Q9Y5R8 145 aa6.28□□□□□ -1.4
RFFL-203ENST00000413582 M0R381 172 aa6.27□□□□□ -1.41
RFFL-203ENST00000413582 RS1O15537 224 aa6.27□□□□□ -1.41
RFFL-203ENST00000413582 CAMPP49913 170 aa6.27□□□□□ -1.41
RFFL-203ENST00000413582 LRP2P98164 4655 aa6.27□□□□□ -1.41
RFFL-203ENST00000413582 ZNF876PQ49A33 203 aa6.27□□□□□ -1.41
RFFL-203ENST00000413582 OR10J3Q5JRS4 329 aa6.27□□□□□ -1.41
RFFL-203ENST00000413582 FAM104BQ5XKR9 115 aa6.27□□□□□ -1.41
RFFL-203ENST00000413582 Q8N3U1 123 aa6.27□□□□□ -1.41
RFFL-203ENST00000413582 OR4C5Q8NGB2 326 aa6.27□□□□□ -1.41
RFFL-203ENST00000413582 CIRBP-AS1Q8TBR5 109 aa6.27□□□□□ -1.41
RFFL-203ENST00000413582 AP1S3Q96PC3 154 aa6.27□□□□□ -1.41
RFFL-203ENST00000413582 DPH3P1Q9H4G8 78 aa6.27□□□□□ -1.41
RFFL-203ENST00000413582 RHODO00212 210 aa6.26□□□□□ -1.41
RFFL-203ENST00000413582 APCSP02743 223 aa6.26□□□□□ -1.41
RFFL-203ENST00000413582 PPBPP02775 128 aa6.26□□□□□ -1.41
RFFL-203ENST00000413582 SMIM17P0DL12 118 aa6.26□□□□□ -1.41
RFFL-203ENST00000413582 HNRNPA3P51991 378 aaKnown RBP6.26□□□□□ -1.41
RFFL-203ENST00000413582 RAB4BP61018 213 aa6.26□□□□□ -1.41
RFFL-203ENST00000413582 LELP1Q5T871 98 aa6.26□□□□□ -1.41
RFFL-203ENST00000413582 ZFP2Q6ZN57 461 aa6.26□□□□□ -1.41
RFFL-203ENST00000413582 C1orf196B1AJZ1 125 aa6.25□□□□□ -1.41
RFFL-203ENST00000413582 TRGC2P03986 189 aa6.25□□□□□ -1.41
RFFL-203ENST00000413582 MT1HL1P0DM35 61 aa6.25□□□□□ -1.41
RFFL-203ENST00000413582 RAB4AP20338 218 aa6.25□□□□□ -1.41
RFFL-203ENST00000413582 FABP9Q0Z7S8 132 aa6.25□□□□□ -1.41
RFFL-203ENST00000413582 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.25□□□□□ -1.41
RFFL-203ENST00000413582 MRAP2Q96G30 205 aa6.25□□□□□ -1.41
RFFL-203ENST00000413582 LAMTOR2Q9Y2Q5 125 aa6.25□□□□□ -1.41
RFFL-203ENST00000413582 KIF25-AS1Q9Y6Z4 181 aa6.25□□□□□ -1.41
RFFL-203ENST00000413582 TRAV8-3A0A0A6YYJ7 113 aa6.24□□□□□ -1.41
RFFL-203ENST00000413582 MUC21A0A0G2JKD1 596 aa6.24□□□□□ -1.41
RFFL-203ENST00000413582 MUC21A0A140T8X8 626 aa6.24□□□□□ -1.41
RFFL-203ENST00000413582 H3BS24 57 aa6.24□□□□□ -1.41
RFFL-203ENST00000413582 PHOX2AO14813 284 aa6.24□□□□□ -1.41
RFFL-203ENST00000413582 PPP1R17O96001 155 aa6.24□□□□□ -1.41
RFFL-203ENST00000413582 SLC25A29Q8N8R3 303 aa6.24□□□□□ -1.41
RFFL-203ENST00000413582 BAALCQ8WXS3 180 aa6.24□□□□□ -1.41
RFFL-203ENST00000413582 TNXBP22105 4242 aa6.23□□□□□ -1.41
RFFL-203ENST00000413582 RAB5BP61020 215 aa6.23□□□□□ -1.41
RFFL-203ENST00000413582 SSTP61278 116 aa6.23□□□□□ -1.41
RFFL-203ENST00000413582 RPL37AP61513 92 aaKnown RBP6.23□□□□□ -1.41
RFFL-203ENST00000413582 RHOHQ15669 191 aa6.23□□□□□ -1.41
RFFL-203ENST00000413582 CFAP126Q5VTH2 177 aa6.23□□□□□ -1.41
RFFL-203ENST00000413582 UFSP1Q6NVU6 142 aa6.23□□□□□ -1.41
RFFL-203ENST00000413582 AMN1Q8IY45 258 aa6.23□□□□□ -1.41
RFFL-203ENST00000413582 ORMDL3Q8N138 153 aa6.23□□□□□ -1.41
RFFL-203ENST00000413582 C14orf178Q8N769 122 aaPredicted RBP6.23□□□□□ -1.41
RFFL-203ENST00000413582 RNF185Q96GF1 192 aa6.23□□□□□ -1.41
RFFL-203ENST00000413582 PRADC1Q9BSG0 188 aa6.23□□□□□ -1.41
RFFL-203ENST00000413582 GTSF1LQ9H1H1 148 aa6.23□□□□□ -1.41
RFFL-203ENST00000413582 H7C1H1 209 aa6.22□□□□□ -1.41
RFFL-203ENST00000413582 CKS2P33552 79 aa6.22□□□□□ -1.41
RFFL-203ENST00000413582 MRPL51Q4U2R6 128 aaKnown RBP6.22□□□□□ -1.41
RFFL-203ENST00000413582 LCE2AQ5TA79 106 aaPredicted RBP6.22□□□□□ -1.41
RFFL-203ENST00000413582 DAZ4Q86SG3 579 aaKnown RBP6.22□□□□□ -1.41
RFFL-203ENST00000413582 ATP6V0E2Q8NHE4 81 aa6.22□□□□□ -1.41
RFFL-203ENST00000413582 ALKBH7Q9BT30 221 aaPredicted RBP6.22□□□□□ -1.41
RFFL-203ENST00000413582 JPT2Q9H910 190 aa6.22□□□□□ -1.41
RFFL-203ENST00000413582 DAZ3Q9NR90 486 aaKnown RBP6.22□□□□□ -1.41
RFFL-203ENST00000413582 TRBV6-4A0A1B0GX49 114 aa6.21□□□□□ -1.42
RFFL-203ENST00000413582 Q0VG73 95 aa6.21□□□□□ -1.42
RFFL-203ENST00000413582 Q8N976 141 aa6.21□□□□□ -1.42
RFFL-203ENST00000413582 SAMD10Q9BYL1 202 aa6.21□□□□□ -1.42
RFFL-203ENST00000413582 COX11Q9Y6N1 276 aa6.21□□□□□ -1.42
RFFL-203ENST00000413582 A0A087WWL8 130 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 IGHV3-73A0A0B4J1V6 119 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 TRBV6-5A0A0K0K1A5 114 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 HIST1H2BKO60814 126 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms