RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 LOC389332A0A1B0GUA5 103 aa14□□□□□ -0.17
PTPA-208ENST00000411917 NIT1Q86X76 327 aa14□□□□□ -0.17
PTPA-208ENST00000411917 BAGE3Q86Y29 109 aa14□□□□□ -0.17
PTPA-208ENST00000411917 URB1-AS1Q96HZ7 61 aa14□□□□□ -0.17
PTPA-208ENST00000411917 TRBV6-8A0A0A6YYG3 113 aa13.99□□□□□ -0.17
PTPA-208ENST00000411917 IGLL5B9A064 214 aa13.99□□□□□ -0.17
PTPA-208ENST00000411917 H7C423 109 aa13.99□□□□□ -0.17
PTPA-208ENST00000411917 LAGE3Q14657 143 aa13.99□□□□□ -0.17
PTPA-208ENST00000411917 FCER1GP30273 86 aa13.98□□□□□ -0.17
PTPA-208ENST00000411917 LELP1Q5T871 98 aa13.98□□□□□ -0.17
PTPA-208ENST00000411917 APLNQ9ULZ1 77 aa13.98□□□□□ -0.17
PTPA-208ENST00000411917 CSMD3Q7Z407 3707 aa13.97□□□□□ -0.17
PTPA-208ENST00000411917 TRBV25-1A0A075B6N4 114 aa13.97□□□□□ -0.17
PTPA-208ENST00000411917 C3orf84H3BNL1 204 aa13.97□□□□□ -0.17
PTPA-208ENST00000411917 NUDT3O95989 172 aa13.97□□□□□ -0.17
PTPA-208ENST00000411917 LYPD5Q6UWN5 251 aa13.97□□□□□ -0.17
PTPA-208ENST00000411917 IGHV1-24A0A0C4DH33 117 aa13.96□□□□□ -0.17
PTPA-208ENST00000411917 LINC00310P59036 64 aa13.96□□□□□ -0.17
PTPA-208ENST00000411917 PKIAP61925 76 aa13.96□□□□□ -0.17
PTPA-208ENST00000411917 NTM-AS1Q6ZSK4 140 aa13.96□□□□□ -0.17
PTPA-208ENST00000411917 IGHV3-38A0A0C4DH36 116 aa13.95□□□□□ -0.18
PTPA-208ENST00000411917 SERF1AO75920 110 aa13.95□□□□□ -0.18
PTPA-208ENST00000411917 TMEM18Q96B42 140 aa13.95□□□□□ -0.18
PTPA-208ENST00000411917 PACRGQ96M98 296 aaPredicted RBP13.95□□□□□ -0.18
PTPA-208ENST00000411917 CHCHD7Q9BUK0 85 aa13.95□□□□□ -0.18
PTPA-208ENST00000411917 NPSP0C0P6 89 aa13.94□□□□□ -0.18
PTPA-208ENST00000411917 AMTP48728 403 aa13.94□□□□□ -0.18
PTPA-208ENST00000411917 SMAGPQ0VAQ4 97 aa13.94□□□□□ -0.18
PTPA-208ENST00000411917 RNASEKQ6P5S7 137 aaKnown RBP13.94□□□□□ -0.18
PTPA-208ENST00000411917 C20orf203Q8NBC4 194 aa13.94□□□□□ -0.18
PTPA-208ENST00000411917 STARD9Q9P2P6 4700 aa13.93□□□□□ -0.18
PTPA-208ENST00000411917 S100A6P06703 90 aa13.93□□□□□ -0.18
PTPA-208ENST00000411917 UPK3BQ9BT76 320 aa13.93□□□□□ -0.18
PTPA-208ENST00000411917 TMEM243Q9BU79 118 aa13.93□□□□□ -0.18
PTPA-208ENST00000411917 PLECQ15149 4684 aaKnown RBP13.93□□□□□ -0.18
PTPA-208ENST00000411917 HSBP1O75506 76 aa13.92□□□□□ -0.18
PTPA-208ENST00000411917 CCL18P55774 89 aa13.92□□□□□ -0.18
PTPA-208ENST00000411917 ESRGQ1W209 222 aa13.92□□□□□ -0.18
PTPA-208ENST00000411917 MRPL52Q86TS9 123 aaKnown RBP13.92□□□□□ -0.18
PTPA-208ENST00000411917 TIMM21Q9BVV7 248 aa13.92□□□□□ -0.18
PTPA-208ENST00000411917 MRPS16Q9Y3D3 137 aaKnown RBP13.92□□□□□ -0.18
PTPA-208ENST00000411917 CSDC2Q9Y534 153 aaKnown RBP13.92□□□□□ -0.18
PTPA-208ENST00000411917 HBDP02042 147 aa13.91□□□□□ -0.18
PTPA-208ENST00000411917 NDUFA6P56556 154 aa13.91□□□□□ -0.18
PTPA-208ENST00000411917 TOMM6Q96B49 74 aa13.91□□□□□ -0.18
PTPA-208ENST00000411917 CYSLTR1Q9Y271 337 aa13.91□□□□□ -0.18
PTPA-208ENST00000411917 PYGO1Q9Y3Y4 419 aa13.91□□□□□ -0.18
PTPA-208ENST00000411917 TRAV8-6A0A0B4J262 113 aa13.9□□□□□ -0.18
PTPA-208ENST00000411917 A0A096LNJ9 63 aa13.89□□□□□ -0.19
PTPA-208ENST00000411917 ZNF25P17030 456 aaPredicted RBP13.89□□□□□ -0.19
PTPA-208ENST00000411917 A0A1B0GUV1 79 aa13.88□□□□□ -0.19
PTPA-208ENST00000411917 C5orf52A6NGY3 159 aa13.88□□□□□ -0.19
PTPA-208ENST00000411917 C2orf66Q6UXQ4 117 aa13.88□□□□□ -0.19
PTPA-208ENST00000411917 SPANXA1Q9NS26 97 aa13.88□□□□□ -0.19
PTPA-208ENST00000411917 NUPR1O60356 82 aa13.87□□□□□ -0.19
PTPA-208ENST00000411917 PDZD11Q5EBL8 140 aa13.87□□□□□ -0.19
PTPA-208ENST00000411917 CASC10Q5T4H9 136 aa13.87□□□□□ -0.19
PTPA-208ENST00000411917 TIMM17AQ99595 171 aa13.87□□□□□ -0.19
PTPA-208ENST00000411917 K7EP13 123 aa13.86□□□□□ -0.19
PTPA-208ENST00000411917 UBE2L6O14933 153 aa13.86□□□□□ -0.19
PTPA-208ENST00000411917 LINC00588Q9Y4M8 146 aa13.86□□□□□ -0.19
PTPA-208ENST00000411917 BTF3P20290 206 aaKnown RBP13.85□□□□□ -0.19
PTPA-208ENST00000411917 ZFAND6Q6FIF0 208 aa13.85□□□□□ -0.19
PTPA-208ENST00000411917 ERASQ7Z444 233 aa13.85□□□□□ -0.19
PTPA-208ENST00000411917 CHCHD5Q9BSY4 110 aa13.85□□□□□ -0.19
PTPA-208ENST00000411917 UBE2D4Q9Y2X8 147 aa13.85□□□□□ -0.19
PTPA-208ENST00000411917 IGIPA6NJ69 53 aa13.84□□□□□ -0.19
PTPA-208ENST00000411917 MRPS36P82909 103 aaKnown RBP13.84□□□□□ -0.19
PTPA-208ENST00000411917 HIST3H2BBQ8N257 126 aa13.84□□□□□ -0.19
PTPA-208ENST00000411917 TMEM141Q96I45 108 aa13.84□□□□□ -0.19
PTPA-208ENST00000411917 ATP5LO75964 103 aa13.83□□□□□ -0.2
PTPA-208ENST00000411917 FGF6P10767 208 aa13.83□□□□□ -0.2
PTPA-208ENST00000411917 LINC01556Q5JQF7 62 aa13.83□□□□□ -0.2
PTPA-208ENST00000411917 PAPPA-AS1Q5QFB9 102 aa13.83□□□□□ -0.2
PTPA-208ENST00000411917 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.82□□□□□ -0.2
PTPA-208ENST00000411917 IGKV2-29A2NJV5 120 aaPredicted RBP13.82□□□□□ -0.2
PTPA-208ENST00000411917 DNAH10OSP0CZ25 163 aa13.82□□□□□ -0.2
PTPA-208ENST00000411917 RPL39P62891 51 aaKnown RBP13.82□□□□□ -0.2
PTPA-208ENST00000411917 HSPB8Q9UJY1 196 aa13.82□□□□□ -0.2
PTPA-208ENST00000411917 LEPROTL1O95214 131 aa13.81□□□□□ -0.2
PTPA-208ENST00000411917 SNRPEP62304 92 aaKnown RBP13.81□□□□□ -0.2
PTPA-208ENST00000411917 FAM19A2Q8N3H0 131 aa13.81□□□□□ -0.2
PTPA-208ENST00000411917 PMCHL1Q16048 86 aa13.8□□□□□ -0.2
PTPA-208ENST00000411917 AMMECR1LQ6DCA0 310 aa13.8□□□□□ -0.2
PTPA-208ENST00000411917 LGALS9CQ6DKI2 356 aa13.8□□□□□ -0.2
PTPA-208ENST00000411917 DEFB104AQ8WTQ1 72 aa13.8□□□□□ -0.2
PTPA-208ENST00000411917 TMEM101Q96IK0 257 aa13.8□□□□□ -0.2
PTPA-208ENST00000411917 SCGB3A1Q96QR1 104 aa13.8□□□□□ -0.2
PTPA-208ENST00000411917 VPS13DQ5THJ4 4388 aa13.79□□□□□ -0.2
PTPA-208ENST00000411917 A0A087WX48 190 aa13.79□□□□□ -0.2
PTPA-208ENST00000411917 TMA7Q9Y2S6 64 aaKnown RBP13.79□□□□□ -0.2
PTPA-208ENST00000411917 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.78□□□□□ -0.2
PTPA-208ENST00000411917 SIVA1O15304 175 aa13.78□□□□□ -0.2
PTPA-208ENST00000411917 S100A2P29034 98 aa13.78□□□□□ -0.2
PTPA-208ENST00000411917 RBX1P62877 108 aa13.78□□□□□ -0.2
PTPA-208ENST00000411917 GAGE6Q13070 117 aa13.78□□□□□ -0.2
PTPA-208ENST00000411917 WFDC10BQ8IUB3 73 aa13.78□□□□□ -0.2
PTPA-208ENST00000411917 OR5A1Q8NGJ0 315 aa13.78□□□□□ -0.2
PTPA-208ENST00000411917 CDC42SE2Q9NRR3 84 aa13.78□□□□□ -0.2
PTPA-208ENST00000411917 MPV17L2Q567V2 206 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms