RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 CNBPP62633 177 aaKnown RBP3.8□□□□□ -1.8
HMGN1P20-201ENST00000411849 RPL36AP83881 106 aaKnown RBP3.8□□□□□ -1.8
HMGN1P20-201ENST00000411849 ODF1Q14990 250 aa3.8□□□□□ -1.8
HMGN1P20-201ENST00000411849 PRR27Q6MZM9 219 aa3.8□□□□□ -1.8
HMGN1P20-201ENST00000411849 TEX261Q6UWH6 196 aa3.8□□□□□ -1.8
HMGN1P20-201ENST00000411849 OCC1Q8TAD7 63 aa3.8□□□□□ -1.8
HMGN1P20-201ENST00000411849 RPL36ALQ969Q0 106 aaKnown RBP3.8□□□□□ -1.8
HMGN1P20-201ENST00000411849 SFRP2Q96HF1 295 aa3.8□□□□□ -1.8
HMGN1P20-201ENST00000411849 FAM210AQ96ND0 272 aa3.8□□□□□ -1.8
HMGN1P20-201ENST00000411849 Q9UF83 564 aa3.8□□□□□ -1.8
HMGN1P20-201ENST00000411849 PHLDA3Q9Y5J5 127 aa3.8□□□□□ -1.8
HMGN1P20-201ENST00000411849 KIF25-AS1Q9Y6Z4 181 aa3.8□□□□□ -1.8
HMGN1P20-201ENST00000411849 TRBV7-3A0A075B6L6 115 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 TRBV10-1A0A0K0K1A3 114 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 hDV102S1A0JD36 115 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 IGLC6P0CF74 106 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 LINC00310P59036 64 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 KRTAP10-8P60410 259 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 PRR3P79522 188 aaKnown RBP3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 MPV17L2Q567V2 206 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 FAM74A4Q5TZK3 123 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 ZFP82Q8N141 532 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 NUDT10Q8NFP7 164 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 OR10AG1Q8NH19 301 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 SPACA4Q8TDM5 124 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 NUDT11Q96G61 164 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 AP5S1Q9NUS5 200 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 PLAC8Q9NZF1 115 aa3.79□□□□□ -1.8
HMGN1P20-201ENST00000411849 PKHD1L1Q86WI1 4243 aa3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 TRBV6-8A0A0A6YYG3 113 aa3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 K7EN84 100 aa3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 M0R381 172 aa3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 SRP19P09132 144 aaKnown RBP3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 GZMBP10144 247 aa3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 UBE2D3P61077 147 aa3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 UBE2D2P62837 147 aa3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 SPINK6Q6UWN8 80 aa3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 OR2D3Q8NGH3 330 aa3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 GTSF1Q8WW33 167 aa3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 CHCHD5Q9BSY4 110 aa3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 EIF5A2Q9GZV4 153 aaKnown RBP3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 BIN3Q9NQY0 253 aa3.78□□□□□ -1.8
HMGN1P20-201ENST00000411849 A0A087WWL8 130 aa3.77□□□□□ -1.81
HMGN1P20-201ENST00000411849 MUC21A0A0G2JKD1 596 aa3.77□□□□□ -1.81
HMGN1P20-201ENST00000411849 MUC21A0A140T8X8 626 aa3.77□□□□□ -1.81
HMGN1P20-201ENST00000411849 H3BS24 57 aa3.77□□□□□ -1.81
HMGN1P20-201ENST00000411849 P01737 135 aa3.77□□□□□ -1.81
HMGN1P20-201ENST00000411849 CHTF8P0CG12 524 aa3.77□□□□□ -1.81
HMGN1P20-201ENST00000411849 RPS20P60866 119 aaKnown RBP3.77□□□□□ -1.81
HMGN1P20-201ENST00000411849 RNASE7Q9H1E1 156 aaKnown RBP3.77□□□□□ -1.81
HMGN1P20-201ENST00000411849 PRR34Q9NV39 138 aa3.77□□□□□ -1.81
HMGN1P20-201ENST00000411849 XKRY2A2RUG3 117 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 C9JQL5 133 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 F2Z2F3 143 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 CEBPGP53567 150 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 RAB4BP61018 213 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 SSTP61278 116 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 SRSF3P84103 164 aaKnown RBP3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 TMEM97Q5BJF2 176 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 SPANXN1Q5VSR9 72 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 KRTAP26-1Q6PEX3 210 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 CLPSL2Q6UWE3 100 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 LYZL1Q6UWQ5 148 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 FAM231DQ6ZW35 169 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 LINC00269Q8N2A0 174 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 FER1L6-AS1Q8NA97 138 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 OR10G8Q8NGN5 311 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 SMIM7Q9BQ49 75 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 SMDT1Q9H4I9 107 aa3.76□□□□□ -1.81
HMGN1P20-201ENST00000411849 TRAV8-4A0A0B4J246 113 aa3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 ZNF727A8MUV8 499 aa3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 GATCO43716 136 aaKnown RBP3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 NTF3P20783 257 aa3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 FOXA3P55318 350 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 RBX1P62877 108 aa3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 CACNG7P62955 275 aa3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 REG3AQ06141 175 aa3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 MAJINQ3KP22 176 aa3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 LINC01551Q86U37 167 aa3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 NEXN-AS1Q8NBZ9 246 aa3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 CNFNQ9BYD5 112 aa3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 KRTAP9-8Q9BYQ0 159 aa3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 RPP21Q9H633 154 aaKnown RBP3.75□□□□□ -1.81
HMGN1P20-201ENST00000411849 IGLV10-54A0A075B6I4 117 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 TRBV25-1A0A075B6N4 114 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 IGKV2-24A0A0C4DH68 120 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 FAM231BA6NCW3 169 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 A8MWL6 223 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 SMIM17P0DL12 118 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 CTRLP40313 264 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 RPL23P62829 140 aaKnown RBP3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 COX6A2Q02221 97 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 PEA15Q15121 130 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 ZNF56Q15929 161 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 TMEM241Q24JQ0 296 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 FAM74A3Q4VXF1 159 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 CT83Q5H943 113 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 STPG4Q8N801 248 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 AP1S3Q96PC3 154 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms