RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 AKAIN1P0CW23 69 aa0.41□□□□□ -2.34
RNU2-28P-201ENST00000410457 R4GMQ9 66 aa0.41□□□□□ -2.34
RNU2-28P-201ENST00000410457 AHCTF1Q8WYP5 2266 aa0.4□□□□□ -2.34
RNU2-28P-201ENST00000410457 SPTBN2O15020 2390 aa0.4□□□□□ -2.34
RNU2-28P-201ENST00000410457 PPIP5K1Q6PFW1 1433 aa0.4□□□□□ -2.34
RNU2-28P-201ENST00000410457 DOCK1Q14185 1865 aa0.4□□□□□ -2.35
RNU2-28P-201ENST00000410457 MIF4GDA9UHW6 222 aaKnown RBP0.4□□□□□ -2.35
RNU2-28P-201ENST00000410457 PIN1P1O15428 100 aa0.4□□□□□ -2.35
RNU2-28P-201ENST00000410457 DLEU1O43261 78 aa0.4□□□□□ -2.35
RNU2-28P-201ENST00000410457 PPP1R17O96001 155 aa0.4□□□□□ -2.35
RNU2-28P-201ENST00000410457 C8orf59Q8N0T1 100 aaPredicted RBP0.4□□□□□ -2.35
RNU2-28P-201ENST00000410457 LENEPQ9Y5L5 61 aa0.4□□□□□ -2.35
RNU2-28P-201ENST00000410457 ARAP2Q8WZ64 1704 aa0.4□□□□□ -2.35
RNU2-28P-201ENST00000410457 IFT172Q9UG01 1749 aa0.4□□□□□ -2.35
RNU2-28P-201ENST00000410457 CELSR2Q9HCU4 2923 aa0.39□□□□□ -2.35
RNU2-28P-201ENST00000410457 UBE2DNLQ8IWF7 75 aa0.39□□□□□ -2.35
RNU2-28P-201ENST00000410457 TTC9CQ8N5M4 171 aa0.39□□□□□ -2.35
RNU2-28P-201ENST00000410457 SPANXDQ9BXN6 97 aa0.39□□□□□ -2.35
RNU2-28P-201ENST00000410457 A2ML1A8K2U0 1454 aa0.39□□□□□ -2.35
RNU2-28P-201ENST00000410457 PRDM2Q13029 1718 aa0.38□□□□□ -2.35
RNU2-28P-201ENST00000410457 A0A1B0GV90 55 aa0.38□□□□□ -2.35
RNU2-28P-201ENST00000410457 TNFP01375 233 aa0.38□□□□□ -2.35
RNU2-28P-201ENST00000410457 IFNGP01579 166 aa0.38□□□□□ -2.35
RNU2-28P-201ENST00000410457 CATR1Q13166 79 aa0.38□□□□□ -2.35
RNU2-28P-201ENST00000410457 CYP4F30PQ9H0H9 118 aa0.38□□□□□ -2.35
RNU2-28P-201ENST00000410457 SCN3BQ9NY72 215 aa0.38□□□□□ -2.35
RNU2-28P-201ENST00000410457 MAST4O15021 2626 aa0.38□□□□□ -2.35
RNU2-28P-201ENST00000410457 NALCNQ8IZF0 1738 aa0.38□□□□□ -2.35
RNU2-28P-201ENST00000410457 SYNE1Q8NF91 8797 aaKnown RBP0.37□□□□□ -2.35
RNU2-28P-201ENST00000410457 IGSF10Q6WRI0 2623 aa0.37□□□□□ -2.35
RNU2-28P-201ENST00000410457 MRC1P22897 1456 aa0.37□□□□□ -2.35
RNU2-28P-201ENST00000410457 DOCK2Q92608 1830 aa0.37□□□□□ -2.35
RNU2-28P-201ENST00000410457 CFAP126Q5VTH2 177 aa0.37□□□□□ -2.35
RNU2-28P-201ENST00000410457 CPSF1Q10570 1443 aaKnown RBP0.37□□□□□ -2.35
RNU2-28P-201ENST00000410457 QRICH2Q9H0J4 1663 aa0.37□□□□□ -2.35
RNU2-28P-201ENST00000410457 KTN1Q86UP2 1357 aaKnown RBP0.36□□□□□ -2.35
RNU2-28P-201ENST00000410457 M0R135 149 aa0.36□□□□□ -2.35
RNU2-28P-201ENST00000410457 SSSCA1O60232 199 aa0.36□□□□□ -2.35
RNU2-28P-201ENST00000410457 SPAG11BQ08648 103 aa0.36□□□□□ -2.35
RNU2-28P-201ENST00000410457 Q5BKY6 102 aa0.36□□□□□ -2.35
RNU2-28P-201ENST00000410457 SPAG11AQ6PDA7 123 aa0.36□□□□□ -2.35
RNU2-28P-201ENST00000410457 SSBP3-AS1Q7Z2R9 100 aa0.36□□□□□ -2.35
RNU2-28P-201ENST00000410457 C5orf38Q86SI9 138 aa0.36□□□□□ -2.35
RNU2-28P-201ENST00000410457 OTOGQ6ZRI0 2925 aa0.35□□□□□ -2.35
RNU2-28P-201ENST00000410457 SMIM4Q8WVI0 70 aa0.35□□□□□ -2.35
RNU2-28P-201ENST00000410457 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
RNU2-28P-201ENST00000410457 C2CD3Q4AC94 2353 aa0.35□□□□□ -2.35
RNU2-28P-201ENST00000410457 ZNF815PA8K554 130 aa0.34□□□□□ -2.36
RNU2-28P-201ENST00000410457 ZNF609O15014 1411 aa0.34□□□□□ -2.36
RNU2-28P-201ENST00000410457 SPINK8P0C7L1 97 aa0.34□□□□□ -2.36
RNU2-28P-201ENST00000410457 MRPL54Q6P161 138 aaKnown RBP0.34□□□□□ -2.36
RNU2-28P-201ENST00000410457 COMMD6Q7Z4G1 85 aa0.34□□□□□ -2.36
RNU2-28P-201ENST00000410457 V9GYH0 126 aa0.34□□□□□ -2.36
RNU2-28P-201ENST00000410457 NCOR2Q9Y618 2525 aa0.34□□□□□ -2.36
RNU2-28P-201ENST00000410457 UNC79Q9P2D8 2635 aa0.34□□□□□ -2.36
RNU2-28P-201ENST00000410457 CHD9Q3L8U1 2897 aa0.33□□□□□ -2.36
RNU2-28P-201ENST00000410457 SMG6Q86US8 1419 aaKnown RBP0.33□□□□□ -2.36
RNU2-28P-201ENST00000410457 TRBV7-3A0A075B6L6 115 aa0.33□□□□□ -2.36
RNU2-28P-201ENST00000410457 OOSP1A8MZH6 123 aa0.33□□□□□ -2.36
RNU2-28P-201ENST00000410457 AMELXQ99217 191 aa0.33□□□□□ -2.36
RNU2-28P-201ENST00000410457 MGST2Q99735 147 aa0.33□□□□□ -2.36
RNU2-28P-201ENST00000410457 C2orf88Q9BSF0 95 aa0.33□□□□□ -2.36
RNU2-28P-201ENST00000410457 IER3IP1Q9Y5U9 82 aa0.33□□□□□ -2.36
RNU2-28P-201ENST00000410457 PLCE1Q9P212 2302 aa0.32□□□□□ -2.36
RNU2-28P-201ENST00000410457 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
RNU2-28P-201ENST00000410457 ANK2Q01484 3957 aa0.32□□□□□ -2.36
RNU2-28P-201ENST00000410457 A0A0D9SFI3 127 aa0.32□□□□□ -2.36
RNU2-28P-201ENST00000410457 SPINK1P00995 79 aa0.32□□□□□ -2.36
RNU2-28P-201ENST00000410457 TPPP2P59282 170 aa0.32□□□□□ -2.36
RNU2-28P-201ENST00000410457 NDUFA4L2Q9NRX3 87 aa0.32□□□□□ -2.36
RNU2-28P-201ENST00000410457 MYOM2P54296 1465 aa0.31□□□□□ -2.36
RNU2-28P-201ENST00000410457 CTXND1A0A1B0GTU2 59 aa0.31□□□□□ -2.36
RNU2-28P-201ENST00000410457 CORTO00230 105 aa0.31□□□□□ -2.36
RNU2-28P-201ENST00000410457 C9orf153Q5TBE3 101 aa0.31□□□□□ -2.36
RNU2-28P-201ENST00000410457 FAM213BQ8TBF2 198 aa0.31□□□□□ -2.36
RNU2-28P-201ENST00000410457 TMEM203Q969S6 136 aa0.31□□□□□ -2.36
RNU2-28P-201ENST00000410457 CNFNQ9BYD5 112 aa0.31□□□□□ -2.36
RNU2-28P-201ENST00000410457 NPVFQ9HCQ7 196 aa0.31□□□□□ -2.36
RNU2-28P-201ENST00000410457 DYNLRB1Q9NP97 96 aa0.31□□□□□ -2.36
RNU2-28P-201ENST00000410457 PLXNB2O15031 1838 aa0.3□□□□□ -2.36
RNU2-28P-201ENST00000410457 WNK3Q9BYP7 1800 aa0.3□□□□□ -2.36
RNU2-28P-201ENST00000410457 SNAPC5O75971 98 aa0.3□□□□□ -2.36
RNU2-28P-201ENST00000410457 GNG4P50150 75 aa0.3□□□□□ -2.36
RNU2-28P-201ENST00000410457 ZNF292O60281 2723 aa0.29□□□□□ -2.36
RNU2-28P-201ENST00000410457 DMBT1Q9UGM3 2413 aaPredicted RBP0.29□□□□□ -2.36
RNU2-28P-201ENST00000410457 WDR7Q9Y4E6 1490 aa0.29□□□□□ -2.36
RNU2-28P-201ENST00000410457 EIF4G3O43432 1585 aaKnown RBP0.29□□□□□ -2.36
RNU2-28P-201ENST00000410457 UBE2L5PA0A1B0GUS4 154 aa0.29□□□□□ -2.36
RNU2-28P-201ENST00000410457 UBE2L3P68036 154 aaKnown RBP0.29□□□□□ -2.36
RNU2-28P-201ENST00000410457 COX17Q14061 63 aa0.29□□□□□ -2.36
RNU2-28P-201ENST00000410457 MYOZ3Q8TDC0 251 aa0.29□□□□□ -2.36
RNU2-28P-201ENST00000410457 TSLPQ969D9 159 aa0.29□□□□□ -2.36
RNU2-28P-201ENST00000410457 CUL7Q14999 1698 aa0.29□□□□□ -2.36
RNU2-28P-201ENST00000410457 LRRC37A2A6NM11 1700 aa0.29□□□□□ -2.36
RNU2-28P-201ENST00000410457 KDM3BQ7LBC6 1761 aa0.29□□□□□ -2.36
RNU2-28P-201ENST00000410457 GPR98Q8WXG9 6306 aa0.28□□□□□ -2.36
RNU2-28P-201ENST00000410457 ROBO1Q9Y6N7 1651 aa0.28□□□□□ -2.36
RNU2-28P-201ENST00000410457 LOC285095A0A1B0GVY8 99 aa0.28□□□□□ -2.36
RNU2-28P-201ENST00000410457 LINC00587B1AMM8 73 aa0.28□□□□□ -2.36
RNU2-28P-201ENST00000410457 F6UZH7 168 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms