RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 IGHV4-4A0A075B6R2 117 aa9.96□□□□□ -0.81
COL6A2-204ENST00000409416 E9PLD3 99 aa9.96□□□□□ -0.81
COL6A2-204ENST00000409416 DEFB4AO15263 64 aa9.96□□□□□ -0.81
COL6A2-204ENST00000409416 HTN3P15516 51 aa9.96□□□□□ -0.81
COL6A2-204ENST00000409416 RPL32P62910 135 aaKnown RBP9.96□□□□□ -0.81
COL6A2-204ENST00000409416 VPREB3Q9UKI3 123 aa9.96□□□□□ -0.81
COL6A2-204ENST00000409416 TRAV13-1A0A0B4J241 112 aa9.96□□□□□ -0.82
COL6A2-204ENST00000409416 CD28P10747 220 aa9.96□□□□□ -0.82
COL6A2-204ENST00000409416 ZFP2Q6ZN57 461 aa9.96□□□□□ -0.82
COL6A2-204ENST00000409416 LGALS3P17931 250 aaKnown RBP9.95□□□□□ -0.82
COL6A2-204ENST00000409416 ZNF580Q9UK33 172 aa9.95□□□□□ -0.82
COL6A2-204ENST00000409416 TRAV12-1A0A0B4J245 112 aa9.95□□□□□ -0.82
COL6A2-204ENST00000409416 DEFB130BP0DP73 79 aa9.95□□□□□ -0.82
COL6A2-204ENST00000409416 DEFB130AP0DP74 79 aa9.95□□□□□ -0.82
COL6A2-204ENST00000409416 IGHV1OR15-1A0A075B7D0 117 aa9.95□□□□□ -0.82
COL6A2-204ENST00000409416 A0A0J9YXV3 536 aa9.95□□□□□ -0.82
COL6A2-204ENST00000409416 SOCS3O14543 225 aa9.95□□□□□ -0.82
COL6A2-204ENST00000409416 VCX2Q9H322 139 aa9.95□□□□□ -0.82
COL6A2-204ENST00000409416 XGP55808 180 aa9.94□□□□□ -0.82
COL6A2-204ENST00000409416 GAGE2BQ13066 116 aa9.94□□□□□ -0.82
COL6A2-204ENST00000409416 GAGE2EQ4V326 116 aa9.94□□□□□ -0.82
COL6A2-204ENST00000409416 STHQ8IWL8 128 aa9.94□□□□□ -0.82
COL6A2-204ENST00000409416 ZNF843Q8N446 348 aa9.94□□□□□ -0.82
COL6A2-204ENST00000409416 GAGE2DQ9UEU5 116 aa9.94□□□□□ -0.82
COL6A2-204ENST00000409416 TRGV2A0A075B6R0 118 aa9.94□□□□□ -0.82
COL6A2-204ENST00000409416 TRBV7-3A0A075B6L6 115 aa9.94□□□□□ -0.82
COL6A2-204ENST00000409416 VCYO14598 125 aa9.94□□□□□ -0.82
COL6A2-204ENST00000409416 ERG28Q9UKR5 140 aa9.94□□□□□ -0.82
COL6A2-204ENST00000409416 SNCGO76070 127 aa9.93□□□□□ -0.82
COL6A2-204ENST00000409416 PPP1R17O96001 155 aa9.93□□□□□ -0.82
COL6A2-204ENST00000409416 PMVKQ15126 192 aa9.93□□□□□ -0.82
COL6A2-204ENST00000409416 TRAV8-3A0A0A6YYJ7 113 aa9.93□□□□□ -0.82
COL6A2-204ENST00000409416 GAGE12JA6NER3 117 aa9.93□□□□□ -0.82
COL6A2-204ENST00000409416 GAGE7O76087 117 aa9.93□□□□□ -0.82
COL6A2-204ENST00000409416 GAGE12FP0CL80 117 aa9.93□□□□□ -0.82
COL6A2-204ENST00000409416 GAGE12GP0CL81 117 aa9.93□□□□□ -0.82
COL6A2-204ENST00000409416 GAGE12IP0CL82 117 aa9.93□□□□□ -0.82
COL6A2-204ENST00000409416 GAGE4Q13068 117 aa9.93□□□□□ -0.82
COL6A2-204ENST00000409416 TAL2Q16559 108 aa9.93□□□□□ -0.82
COL6A2-204ENST00000409416 SPATA25Q9BR10 227 aa9.93□□□□□ -0.82
COL6A2-204ENST00000409416 Q6ZUT4 128 aa9.92□□□□□ -0.82
COL6A2-204ENST00000409416 CCDC179H3BU77 68 aa9.92□□□□□ -0.82
COL6A2-204ENST00000409416 IGHV4-31P0DP07 118 aa9.92□□□□□ -0.82
COL6A2-204ENST00000409416 CLPSL2Q6UWE3 100 aa9.92□□□□□ -0.82
COL6A2-204ENST00000409416 CITED2Q99967 270 aaPredicted RBP9.91□□□□□ -0.82
COL6A2-204ENST00000409416 DEFB113Q30KQ7 82 aa9.91□□□□□ -0.82
COL6A2-204ENST00000409416 ZNRF2Q8NHG8 242 aa9.91□□□□□ -0.82
COL6A2-204ENST00000409416 COL6A5A8TX70 2615 aa9.91□□□□□ -0.82
COL6A2-204ENST00000409416 FOXI1Q12951 378 aa9.91□□□□□ -0.82
COL6A2-204ENST00000409416 TENM4Q6N022 2769 aa9.9□□□□□ -0.82
COL6A2-204ENST00000409416 TSHBP01222 138 aa9.9□□□□□ -0.82
COL6A2-204ENST00000409416 CRYGDP07320 174 aa9.9□□□□□ -0.82
COL6A2-204ENST00000409416 MRPL23Q16540 153 aaKnown RBP9.9□□□□□ -0.82
COL6A2-204ENST00000409416 C19orf54Q5BKX5 351 aa9.9□□□□□ -0.82
COL6A2-204ENST00000409416 A0A0J9YX75 114 aa9.89□□□□□ -0.83
COL6A2-204ENST00000409416 TSPEAR-AS2P59090 65 aa9.89□□□□□ -0.83
COL6A2-204ENST00000409416 MORN3Q6PF18 240 aaPredicted RBP9.89□□□□□ -0.83
COL6A2-204ENST00000409416 M0QXV9 152 aa9.89□□□□□ -0.83
COL6A2-204ENST00000409416 DCANP1Q8TF63 244 aa9.89□□□□□ -0.83
COL6A2-204ENST00000409416 NDUFA7O95182 113 aa9.89□□□□□ -0.83
COL6A2-204ENST00000409416 PSMB8P28062 276 aa9.89□□□□□ -0.83
COL6A2-204ENST00000409416 LINC01619G3V211 115 aa9.88□□□□□ -0.83
COL6A2-204ENST00000409416 J3QQQ9 107 aa9.88□□□□□ -0.83
COL6A2-204ENST00000409416 TSPAN13O95857 204 aa9.88□□□□□ -0.83
COL6A2-204ENST00000409416 MEIG1Q5JSS6 88 aa9.88□□□□□ -0.83
COL6A2-204ENST00000409416 TMEM262E9PQX1 116 aa9.88□□□□□ -0.83
COL6A2-204ENST00000409416 PF4P02776 101 aa9.88□□□□□ -0.83
COL6A2-204ENST00000409416 NOP10Q9NPE3 64 aaKnown RBP9.88□□□□□ -0.83
COL6A2-204ENST00000409416 IGLV4-69A0A075B6H9 119 aa9.88□□□□□ -0.83
COL6A2-204ENST00000409416 KLLNB2CW77 178 aa9.88□□□□□ -0.83
COL6A2-204ENST00000409416 PDZD2O15018 2839 aa9.87□□□□□ -0.83
COL6A2-204ENST00000409416 LINC00315P59091 139 aa9.87□□□□□ -0.83
COL6A2-204ENST00000409416 VWFP04275 2813 aa9.87□□□□□ -0.83
COL6A2-204ENST00000409416 A0A0J9YY99 117 aa9.86□□□□□ -0.83
COL6A2-204ENST00000409416 IGIPA6NJ69 53 aa9.86□□□□□ -0.83
COL6A2-204ENST00000409416 POLR2KP53803 58 aaKnown RBP9.86□□□□□ -0.83
COL6A2-204ENST00000409416 PAPPA-AS1Q5QFB9 102 aa9.86□□□□□ -0.83
COL6A2-204ENST00000409416 KIF25-AS1Q9Y6Z4 181 aa9.86□□□□□ -0.83
COL6A2-204ENST00000409416 H3BUA1 57 aa9.86□□□□□ -0.83
COL6A2-204ENST00000409416 IGLV1-40P01703 118 aa9.86□□□□□ -0.83
COL6A2-204ENST00000409416 ZNF702PQ9H963 129 aa9.86□□□□□ -0.83
COL6A2-204ENST00000409416 MED14OSP0DP75 135 aa9.85□□□□□ -0.83
COL6A2-204ENST00000409416 PPDPFQ9H3Y8 114 aa9.85□□□□□ -0.83
COL6A2-204ENST00000409416 RBMY1A1P0DJD3 496 aaKnown RBP9.85□□□□□ -0.83
COL6A2-204ENST00000409416 RBMY1CP0DJD4 496 aa9.85□□□□□ -0.83
COL6A2-204ENST00000409416 CRIP2P52943 208 aaPredicted RBP9.85□□□□□ -0.83
COL6A2-204ENST00000409416 RBMY1FQ15415 496 aaKnown RBP9.85□□□□□ -0.83
COL6A2-204ENST00000409416 KLK9Q2XQG4 91 aa9.85□□□□□ -0.83
COL6A2-204ENST00000409416 TMEM141Q96I45 108 aa9.85□□□□□ -0.83
COL6A2-204ENST00000409416 FAM19A4Q96LR4 140 aa9.85□□□□□ -0.83
COL6A2-204ENST00000409416 DNAJC9-AS1A6NH13 148 aa9.84□□□□□ -0.83
COL6A2-204ENST00000409416 PEMTQ9UBM1 199 aa9.84□□□□□ -0.83
COL6A2-204ENST00000409416 A4D1N5 150 aa9.84□□□□□ -0.83
COL6A2-204ENST00000409416 K7EQG2 157 aa9.84□□□□□ -0.83
COL6A2-204ENST00000409416 CCL24O00175 119 aa9.84□□□□□ -0.83
COL6A2-204ENST00000409416 Q6ZSV7 163 aa9.84□□□□□ -0.83
COL6A2-204ENST00000409416 TRPT1Q86TN4 253 aaKnown RBP9.84□□□□□ -0.83
COL6A2-204ENST00000409416 NDUFA11Q86Y39 141 aa9.84□□□□□ -0.83
COL6A2-204ENST00000409416 FAM110AQ9BQ89 295 aa9.84□□□□□ -0.83
COL6A2-204ENST00000409416 M0QY20 66 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms