RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 NFE4Q86UQ8 179 aa9.32□□□□□ -0.92
SHANK2-203ENST00000409161 ARTNQ5T4W7 220 aa9.32□□□□□ -0.92
SHANK2-203ENST00000409161 A0A1B0GXF2 115 aa9.32□□□□□ -0.92
SHANK2-203ENST00000409161 TIMM17BO60830 172 aa9.32□□□□□ -0.92
SHANK2-203ENST00000409161 SLURP1P55000 103 aa9.32□□□□□ -0.92
SHANK2-203ENST00000409161 IGHV3-30P01768 117 aa9.31□□□□□ -0.92
SHANK2-203ENST00000409161 IGHV3-33P01772 117 aa9.31□□□□□ -0.92
SHANK2-203ENST00000409161 IGHV3-30-5P0DP03 117 aa9.31□□□□□ -0.92
SHANK2-203ENST00000409161 APRG1Q8IVJ8 170 aa9.31□□□□□ -0.92
SHANK2-203ENST00000409161 ZFHX2Q9C0A1 2572 aaPredicted RBP9.31□□□□□ -0.92
SHANK2-203ENST00000409161 IGHV4OR15-8A0A075B7B6 117 aa9.31□□□□□ -0.92
SHANK2-203ENST00000409161 A0A087WW49 117 aa9.31□□□□□ -0.92
SHANK2-203ENST00000409161 F8W735 103 aaPredicted RBP9.31□□□□□ -0.92
SHANK2-203ENST00000409161 PTH2Q96A98 100 aa9.31□□□□□ -0.92
SHANK2-203ENST00000409161 AJUBAQ96IF1 538 aa9.31□□□□□ -0.92
SHANK2-203ENST00000409161 A0A0U1RQV1 116 aa9.3□□□□□ -0.92
SHANK2-203ENST00000409161 IGHV4-59P01825 116 aa9.3□□□□□ -0.92
SHANK2-203ENST00000409161 C11orf53Q8IXP5 236 aa9.3□□□□□ -0.92
SHANK2-203ENST00000409161 PRO0255Q9UI72 69 aa9.3□□□□□ -0.92
SHANK2-203ENST00000409161 ENHOQ6UWT2 76 aa9.3□□□□□ -0.92
SHANK2-203ENST00000409161 ZFAND2AQ8N6M9 145 aa9.3□□□□□ -0.92
SHANK2-203ENST00000409161 MSRB1Q9NZV6 116 aa9.3□□□□□ -0.92
SHANK2-203ENST00000409161 Q6ZSR3 168 aa9.3□□□□□ -0.92
SHANK2-203ENST00000409161 ZNF503-AS2A6NEH8 195 aa9.3□□□□□ -0.92
SHANK2-203ENST00000409161 LRRC75A-AS1Q8N1F1 130 aa9.29□□□□□ -0.92
SHANK2-203ENST00000409161 DEFB136Q30KP8 78 aa9.29□□□□□ -0.92
SHANK2-203ENST00000409161 DEFB112Q30KQ8 113 aa9.29□□□□□ -0.92
SHANK2-203ENST00000409161 TLN2Q9Y4G6 2542 aa9.29□□□□□ -0.92
SHANK2-203ENST00000409161 SERP1Q9Y6X1 66 aa9.29□□□□□ -0.92
SHANK2-203ENST00000409161 FAM222AQ5U5X8 452 aa9.28□□□□□ -0.92
SHANK2-203ENST00000409161 NEXN-AS1Q8NBZ9 246 aa9.28□□□□□ -0.92
SHANK2-203ENST00000409161 FAM215AQ9Y5M1 114 aa9.28□□□□□ -0.92
SHANK2-203ENST00000409161 KLK12Q9UKR0 248 aa9.28□□□□□ -0.92
SHANK2-203ENST00000409161 SMIM9A6NGZ8 99 aa9.28□□□□□ -0.92
SHANK2-203ENST00000409161 C1orf195Q5TG92 126 aa9.28□□□□□ -0.92
SHANK2-203ENST00000409161 MUC7Q8TAX7 377 aa9.28□□□□□ -0.92
SHANK2-203ENST00000409161 PATE2Q6UY27 113 aa9.27□□□□□ -0.92
SHANK2-203ENST00000409161 FN1P02751 2386 aaKnown RBP9.27□□□□□ -0.93
SHANK2-203ENST00000409161 COX7CP15954 63 aa9.27□□□□□ -0.93
SHANK2-203ENST00000409161 MAPK1IP1LQ8NDC0 245 aa9.27□□□□□ -0.93
SHANK2-203ENST00000409161 TP73-AS1Q9UF72 201 aa9.27□□□□□ -0.93
SHANK2-203ENST00000409161 A0A0J9YX75 114 aa9.26□□□□□ -0.93
SHANK2-203ENST00000409161 PRSS33Q8NF86 280 aa9.26□□□□□ -0.93
SHANK2-203ENST00000409161 CTSZQ9UBR2 303 aa9.26□□□□□ -0.93
SHANK2-203ENST00000409161 COX17Q14061 63 aa9.26□□□□□ -0.93
SHANK2-203ENST00000409161 DHRS4-AS1Q9P1J3 65 aa9.26□□□□□ -0.93
SHANK2-203ENST00000409161 Q8N9W7 124 aa9.26□□□□□ -0.93
SHANK2-203ENST00000409161 IGLV2-23P01705 113 aa9.25□□□□□ -0.93
SHANK2-203ENST00000409161 ZNF706Q9Y5V0 76 aaPredicted RBP9.25□□□□□ -0.93
SHANK2-203ENST00000409161 TMEM223A0PJW6 202 aa9.25□□□□□ -0.93
SHANK2-203ENST00000409161 TRIAP1O43715 76 aa9.24□□□□□ -0.93
SHANK2-203ENST00000409161 Q6Q795 121 aa9.24□□□□□ -0.93
SHANK2-203ENST00000409161 MYCNOSP40205 109 aa9.24□□□□□ -0.93
SHANK2-203ENST00000409161 LINC00308Q8TCZ7 52 aa9.24□□□□□ -0.93
SHANK2-203ENST00000409161 SMIM26A0A096LP01 95 aa9.24□□□□□ -0.93
SHANK2-203ENST00000409161 REG3AQ06141 175 aa9.24□□□□□ -0.93
SHANK2-203ENST00000409161 VPREB1P12018 145 aa9.23□□□□□ -0.93
SHANK2-203ENST00000409161 WFDC10BQ8IUB3 73 aa9.23□□□□□ -0.93
SHANK2-203ENST00000409161 Q8N9L7 120 aa9.23□□□□□ -0.93
SHANK2-203ENST00000409161 U3KQK5 164 aa9.23□□□□□ -0.93
SHANK2-203ENST00000409161 F8P00451 2351 aa9.23□□□□□ -0.93
SHANK2-203ENST00000409161 CCKP06307 115 aa9.23□□□□□ -0.93
SHANK2-203ENST00000409161 IGF2-ASQ6U949 168 aa9.23□□□□□ -0.93
SHANK2-203ENST00000409161 DEFB113Q30KQ7 82 aa9.22□□□□□ -0.93
SHANK2-203ENST00000409161 TTTY13Q9BZ97 58 aa9.22□□□□□ -0.93
SHANK2-203ENST00000409161 COL4A6Q14031 1691 aa9.22□□□□□ -0.93
SHANK2-203ENST00000409161 LY6G6EA0A0G2JKS1 128 aa9.21□□□□□ -0.93
SHANK2-203ENST00000409161 U3KQA8 63 aa9.21□□□□□ -0.93
SHANK2-203ENST00000409161 LOXL1Q08397 574 aaPredicted RBP9.21□□□□□ -0.94
SHANK2-203ENST00000409161 PIEZO2Q9H5I5 2752 aa9.21□□□□□ -0.94
SHANK2-203ENST00000409161 PRAC2D3DTV9 90 aa9.21□□□□□ -0.94
SHANK2-203ENST00000409161 RITA1Q96K30 269 aa9.21□□□□□ -0.94
SHANK2-203ENST00000409161 SMAD5-AS1Q9Y6J3 95 aa9.21□□□□□ -0.94
SHANK2-203ENST00000409161 WT1P19544 449 aaPredicted RBP9.2□□□□□ -0.94
SHANK2-203ENST00000409161 DEFB135Q30KP9 77 aa9.2□□□□□ -0.94
SHANK2-203ENST00000409161 IGLV2-14P01704 120 aa9.2□□□□□ -0.94
SHANK2-203ENST00000409161 LINC00269Q8N2A0 174 aa9.2□□□□□ -0.94
SHANK2-203ENST00000409161 ACANP16112 2415 aa9.2□□□□□ -0.94
SHANK2-203ENST00000409161 RNF138Q8WVD3 245 aa9.2□□□□□ -0.94
SHANK2-203ENST00000409161 PYGO1Q9Y3Y4 419 aa9.2□□□□□ -0.94
SHANK2-203ENST00000409161 MLST8Q9BVC4 326 aa9.2□□□□□ -0.94
SHANK2-203ENST00000409161 J3QKU1 62 aa9.19□□□□□ -0.94
SHANK2-203ENST00000409161 IGHV4-38-2P0DP08 117 aa9.19□□□□□ -0.94
SHANK2-203ENST00000409161 SPRY2O43597 315 aa9.19□□□□□ -0.94
SHANK2-203ENST00000409161 LYPD6Q86Y78 171 aa9.19□□□□□ -0.94
SHANK2-203ENST00000409161 TLN1Q9Y490 2541 aaKnown RBP9.19□□□□□ -0.94
SHANK2-203ENST00000409161 LST1O00453 97 aa9.19□□□□□ -0.94
SHANK2-203ENST00000409161 CHCHD10Q8WYQ3 142 aaPredicted RBP9.19□□□□□ -0.94
SHANK2-203ENST00000409161 SETD2Q9BYW2 2564 aaPredicted RBP9.19□□□□□ -0.94
SHANK2-203ENST00000409161 C11orf1Q9H5F2 150 aa9.19□□□□□ -0.94
SHANK2-203ENST00000409161 LINC00467Q9BRT7 94 aa9.18□□□□□ -0.94
SHANK2-203ENST00000409161 IGLV1-47P01700 117 aa9.18□□□□□ -0.94
SHANK2-203ENST00000409161 PLA2G2EQ9NZK7 142 aa9.18□□□□□ -0.94
SHANK2-203ENST00000409161 LINC00574Q9H8X3 128 aa9.18□□□□□ -0.94
SHANK2-203ENST00000409161 WFDC11Q8NEX6 87 aa9.18□□□□□ -0.94
SHANK2-203ENST00000409161 HIGD2AQ9BW72 106 aa9.18□□□□□ -0.94
SHANK2-203ENST00000409161 UBE2D2P62837 147 aa9.18□□□□□ -0.94
SHANK2-203ENST00000409161 ODF3L1Q8IXM7 274 aa9.18□□□□□ -0.94
SHANK2-203ENST00000409161 C9orf85Q96MD7 179 aa9.18□□□□□ -0.94
SHANK2-203ENST00000409161 TRAV7A0A075B6U4 112 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms